Entry Detail



General Information

Database ID:TRD01898
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-3003a
tsRNA Type:tRF-3
Amino acid and Anticodon:AlaAGC
Sequence:TCCCCGGCACCTCCACCA
Related Target:N/A
Predicted Target:SEC14L1//RAB43//ISY1-RAB43//FAM171A2//SMTN//RIC3//RETREG3//EGLN3//DCHS1//PLXNB1
External Links:
MINTbase ID:tRF-18-8R6546D2
tRFdb ID:tRFdb-3003a

[1] gtRNAdb_ID:tRNA-Ala-AGC-3-1
Anticodon:AlaAGC
tRNA_number:trna65
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28574990        End Site(bp): 28575004+3

[2] gtRNAdb_ID:tRNA-Ala-AGC-2-2
Anticodon:AlaAGC
tRNA_number:trna101
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28831462-3        End Site(bp): 28831476

[3] gtRNAdb_ID:tRNA-Ala-AGC-2-1
Anticodon:AlaAGC
tRNA_number:trna102
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28806221-3        End Site(bp): 28806235

[4] gtRNAdb_ID:tRNA-Ala-TGC-6-1
Anticodon:AlaTGC
tRNA_number:trna113
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28726141-3        End Site(bp): 28726155

[5] gtRNAdb_ID:tRNA-Ala-TGC-1-1
Anticodon:AlaTGC
tRNA_number:trna110
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28757547-3        End Site(bp): 28757561



tsRNA Association Statistics

Total Associated Disease Number:4
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D010003DOID:8398
Disease Name:Osteoarthritisosteoarthritis
Category:MeSHDisease Ontology
Type:Musculoskeletal Diseases//Musculoskeletal Diseasesdisease of anatomical entity
Define:A progressive, degenerative joint disease, the most common form of arthritis, especially in older persons. The disease is thought to result not from the aging process but from biochemical changes and biomechanical stresses affecting articular cartilage. In the foreign literature it is often called osteoarthrosis deformans.An arthritis that has_material_basis_in worn out cartilage located_in joint.
Alias:Arthritis, Degenerative//Arthroses//Arthrosis//Osteoarthrosis//Osteoarthrosis Deformansdegenerative arthritis//degenerative joint disease//hypertrophic arthritis//Osteoarthrosis and allied disorder//osteoarthrosis



Disease Association Statistics

Total Associated tsRNA Number:87
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:PCR//Transfection//Luciferase reporter assay//RIP
Weak Evidence:N/A



Reference

[1] PubMed ID:32407895
Disease Name:Osteoarthritis
Tissue:N/A
Dysfunction Pattern:N/A
Validated Method:PCR//Transfection//Luciferase reporter assay//RIP
Description:RIP assay showed enrichment of tRF-3003a into AGO2/RISC in IL-1beta treated chondrocytes.
Comparision:N/A
Mechanism:N/A