The tsRNA and Disease Database (version 1.0)
tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
---|---|---|---|---|
tRF-33-86V8WPMN1E8Y0E | 5'-tiRNA | GluTTC | TCCCATATGGTCTAGCGGTTAGGATTCCTGGTT | SGMS2//MOB3C//PPP1R26//CLEC18A//CLEC18C//CLEC18B//FRK//COL4A3//CCDC24//PAQR4 |
tRF-34-87R8WP9I1EWJIQ | 5'-tiRNA | GluTTC | TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGCTT | PAQR4//TMEM69//RFTN1//BAHCC1//DDX60//TFCP2L1//PHETA1//CHRNB4//SLC25A6//EME2 |
tiRNA-iMet-CAT-001 | 5'-tiRNA | iMetCAT | AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCC | TBC1D5//SIRPB1//IFIH1//SRPX//LHX6//ZNF579//SETD4//SRRM2//ZFAND3//CCL14 |
tiRNA-Pro-CGG-001 | 5'-tiRNA | ProCGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTC | KCNJ4//HMGN2//STAB2//NOMO2//NOMO3//TRMT5//BLMH//GTF3C4//ASGR1//KEAP1 |
tRF-33-Q99P9P9NH57SD3 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCT | ZBED2//ERAP1//NPTXR//CLASRP//OBSCN//HK2//NR1H3//HJURP//AGRN//EPB41L3 |
tRF-34-LZNL7L73V6M9I3 | 5'-tiRNA | ValCAC | CGCTTCTGTAGTGTAGTGGTTATCACGTTCGCCT | ERAP1//ZBED2//CLPB//SLC12A5//HK2//NPTXR//CLASRP//OBSCN//MYO1G//ATG101 |
tiRNA-Val-TAC-004 | 5'-tiRNA | ValTAC | GGTTCCATAGTGTAGTGGTTATCACGTCTGCTTT | CAMK1D//ZNF281//CYP4F3//SCAF1//TEDC1//ZC3H15//TMBIM6//SLC35B2//DSP//CAST |
mt-i-tRF-GluUUC | i-tRF | GluTTC | N/A | N/A |
tRF-1001 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTATTT | GOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8 |
tRF-1035 | tRF-1 | ThrCGT | GATATCCAACCTTCGGCTATAGGGTGGAGACTTTTT | PSG1//ADCK2//PLRG1//MAJIN//EFCAB2//MSH2//CELF3//FREM2//IZUMO4//MIEN1 |
tRF-27:42-Gly-GCC-1-M3 | tRF-2 | GlyGCC | TCGCCTGCCACGCGGG | FCGR2A//DNLZ//FAM83C//ABHD17C//SPTB//IL12RB2//TFAP2B//PRRC2A//LMNTD2//TRIOBP |
tRF-22-8EKSP1852 | tRF-3 | AlaAGC | TCAATCCCCGGCACCTCCACCA | NEO1//RBM27//FAM171A2//DCHS1//RAB43//ISY1-RAB43//IFI44L//SMTN//MEX3A//RETREG3 |
tRF-3003a | tRF-3 | AlaAGC | TCCCCGGCACCTCCACCA | SEC14L1//RAB43//ISY1-RAB43//FAM171A2//SMTN//RIC3//RETREG3//EGLN3//DCHS1//PLXNB1 |
tRF-3021 | tRF-3 | AlaCGC;AlaTGC | TCCCCGGCATCTCCACCA | SEC14L1//PABPN1//RAB43//ISY1-RAB43//FAM171A2//SMTN//GLI2//RIC3//RETREG3//FRMPD4 |
tRF-57:75-Gln-CTG-2-M3 | tRF-3 | GlnCTG | AGTCTCGGTGGAACCTCCA | ST3GAL4//TOR3A//PRDM1//MYO1C//SLC6A7//GPR149//FNDC11//ACOXL//STAG2//HEXIM1 |
tRF-Gln-CTG-005 | tRF-3 | GlnCTG | TCTCGGTGGAACCTCCA | ST3GAL4//TOR3A//FNDC11//FNBP1//DCAKD//ORC1//CRTAP//SYNE2//FHAD1//TP53BP2 |
tRF-Glu-CTC-022 | tRF-3 | GluCTC | N/A | N/A |
tRF-Glu-TTC-071 | tRF-3 | GluTTC | N/A | N/A |
tRF-Gly-TCC-060 | tRF-3 | GlyTCC | N/A | N/A |
i-tRFle-AAT-019 | tRF-3 | IleAAT | TCCCCGTACGGGCCACCA | RNF39//HCLS1//LPCAT3//COL9A3//PRRC2B//NUTM2D//ALKAL2//DOK2//HLA-C//DNAH1 |
tRF-65:86-Leu-CAA-1-M5 | tRF-3 | LeuCAA | TCGAATCCCACTTCTGACACCA | PTCH1//PCYT2//ALDH1L1//CLSPN//RBM43//NGB//ZNF26//PLN//TAF8//TENM4 |
tRF-Leu-CAA-006 | tRF-3 | LeuCAA | TCCCACTTCTGACACCA | ACSBG1//ALDH1L1//ZC3H7B//FBXL19//ESRRA//NGB//PLN//INTS9//RBM43//ATN1 |
tRF-3009 | tRF-3 | LeuTAA | ACCCCACTCCTGGTACCA | ANKRD27//DTWD1//SHANK3//ELN//GDF6//CCDC88C//SLC39A13//ACE//ID4//AC011498.4 |
tRF-53:71-chrM.Pro-TGG | tRF-3 | ProTGG | AAGACTTTTTCTCTGACCA | RPL28//PHEX//TASOR2//TSC22D1//FLG//PRMT2//RNFT1//VCPIP1//MPRIP//PRKAG3 |
tRF-68:85-Ser-GCT-3-M4 | tRF-3 | SerGCT | ATCCCATCCTCGTCGCCA | SMAD6//ADAM10//BOP1//PPP2R5E//MZF1//ZEB2//ADRA2A//ELMSAN1//HECA//RASGRP2 |
tRF-68:85-Ser-TGA-4 | tRF-3 | SerTGA | ATCCTGTCGGCTACGCCA | CD320//GPSM1//DYRK3//HMCN2//FBXL14//TOR2A//MKS1//GALNT2//FANCC//ST3GAL2 |
tRF-Thr-AGT-003 | tRF-3 | ThrAGT | N/A | N/A |
tRF-34-YKWIR959MIL0HV | tRF-3 | TyrGTA | TTAGGTCGCTGGTTCGATTCCGGCTCGAAGGACC | KLHDC4//PMPCA//DNMT3A//UBR2//WASF1//TMEM125//ADGRB2//PPP2R3B//ABCB9//RILPL1 |
tRF-57:76-Tyr-GTA-2-M2 | tRF-3 | TyrGTA | GATTCCGGCTCGAAGGACCA | KLHDC4//GAD2//ARHGAP33//REPIN1//PLEKHA8//ATAD1//TNR//DNMT3A//CCDC106//CHD2 |
tRF-Tyr-GTA-011 | tRF-3 | TyrGTA | ATCCGGCTCGGAGGACCA | CCDC106//STMN3//CLK3//EPN2//C8orf58//TBX1//NMRAL1//RNF32//ADAMTS10//OSCAR |
tRF-18-BS68BFD2 | tRF-3 | ValAAC;ValCAC | AACCGGGCGGAAACACCA | STK32A//LTBP3//ITGB3BP//DENND6A//CDYL//HNRNPH1//DNAJC5//SH3BP5L//LYPLA1//LPO |
tRF-25-R9ODMJ6B26 | tRF-3 | ValAAC;ValCAC | GGTTCGAAACCGGGCGGAAACACCA | HECTD4//LTBP3//MTURN//RMND5A//ESR1//STK32A//MYO1G//ERAP1//MOV10//GNG2 |
tRF-38-QB1MK8YUBS68BFD2 | tRF-3 | ValAAC;ValCAC | GCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCA | FAM160B2//AKAP1//FANCM//GDF2//ITGB3BP//LRRC57//IL20RB//CORO1C//PCYT1A//PNPLA5 |
tRF-1:23-chrM.Ala-TGC | tRF-5 | AlaTGC | AAGGGCTTAGCTTAATTAAAGTG | TFDP2//NTRK2//COMMD9//TSPAN6//PNPLA8//ADGRG4//NLRC3//ENSA//LRRN1//RHO |
tRF-30-PNR8YO9LON4V | tRF-5 | GlyCCC | GCATTGGTGGTTCAATGGTAGAATTCTCGC | FCGR2A//ANAPC2//LPAR1//ACAN//TSPAN18//SPARC//LRP1//SP100//OLFM3//AGBL3 |
tRF-Gly-CCC-005 | tRF-5 | GlyCCC | GCATTGGTGGTTCAATGGTAGAATTCTCGCCT | FCGR2A//LPAR1//ANAPC2//COL6A5//ACAN//ERAS//DPF1//AGBL3//SLC26A6//DNAH12 |
tRF-Gly-CCC-039 | tRF-5 | GlyCCC | GCGCCGCTGGTGTAGTGGTATCATGCAA | PTPRK//ZNF273//ESPN//SSH1//FKBP1A//STAG3//DMAP1//KMT2D//ZNF467//GATD1 |
tRF-1:28-His-GTG-1 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCT | SHF//OTUB2//RBMXL2//MUC5B//CXCL16//TEP1//DUSP10//AGAP2//LUZP1//TET2 |
tRF-His-GTG-006 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTG | SHF//OTUB2//RBMXL2//FAM49B//TEP1//SEMA4G//CXCL16//OR13J1//ARID1A//COX7B |
tRF-His-GTG-009 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGT | SHF//EVPLL//ARHGAP25//SHANK2//DDB1//SUSD5//RBMXL2//FOXC1//OTUB2//AC010422.3 |
tRF-Lys-CTT-008 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGAC | EBI3//RPS6KA2//NFKBID//PES1//POM121C//STX18//CFAP410//ALG14//POMZP3//INTS6 |
tRF-Lys-CTT-011 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGGGAC | EBI3//ZDHHC3//ZBTB17//GPER1//SMOC2//GNA14//RPS6KA2//TNRC18//CFAP410//WDR54 |
tRF-Ser-AGA-002 | tRF-5 | SerAGA | GTAGTCGTGGCCGA | ADAT3//ZFAND3//POLI//CTBP2//LTBP2//SOX1//COL1A2//ARAP1//POLD1//ZNF276 |
tRF-1:22-Val-AAC-1-M7 | tRF-5 | ValAAC | GTTTCCGTAGTGTAGTGGTTAT | CTNND2//HNRNPUL1//RGS8//ELMO3//ZBED2//NEFL//CEL//KRTAP19-8//MYH6//FAM171A1 |
tRF-22-79MP9PMNI | tRF-5 | ValCAC | GTTTCCGTAGTGTAGCGGTTAT | HNRNPUL1//KLK10//ELMO3//BECN1//MYH3//TCP1//CEL//KIAA0319//MED31//PEPD |
tRF-37-Q99P9P9NH57S362 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTCACA | ZBED2//ERAP1//SCN1A//OBSCN//TRIM22//GRIN2A//PLEKHG5//ABI3//NPTXR//SBF1 |
tRF-5009a | tRF-5 | ValCAC | GCTTCTGTAGTGTAG | CENPF//EEA1//SLC16A7//OLIG2//SLC25A22//ESRP1//ZNF275//RABEP1//KIF16B//BARD1 |
tRF-Val-CAC-007 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTT | SREBF2//ZBED2//FNTB//CHURC1-FNTB//CASZ1//SCIN//STARD6//THOP1//PTPN14//TUBB |
tRF-5022B | tRF-5 | N/A | N/A | N/A |
TRA-AGC6-1.1 | N/A | AlaAGC | N/A | N/A |
Trnas-gcu | N/A | AlaAGC | N/A | N/A |
TRNAR-ACG | N/A | ArgACG | N/A | N/A |
TRNAI-AAU | N/A | AsnATT | N/A | N/A |
TRN-GTT9-1 | N/A | AsnGTT | N/A | N/A |
TRNAD-GUC | N/A | AspGTC | N/A | N/A |
TRC-GCA7-1 | N/A | CysGCA | N/A | N/A |
TRNAA-UGC | N/A | CysGCA | N/A | N/A |
tRF-Gln-CTG-001 | N/A | GlnCTG | N/A | N/A |
TRQ-CTG3-1 | N/A | GlnCTG | N/A | N/A |
n-TQttg6 | N/A | GlnTTG | N/A | N/A |
tiRNA-5031-GluCTC-1 | N/A | GluCTC | N/A | N/A |
tiRNA-5035-GluCTC | N/A | GluCTC | N/A | N/A |
tRF-Gly-CCC-041 | N/A | GlyCCC | N/A | N/A |
tRF-Ile-AAT-019 | N/A | IleAAT | N/A | N/A |
TRM-CAT4-3 | N/A | MetCAT | N/A | N/A |
TRNAE-UUC | N/A | PheGAA | N/A | N/A |
TRNAF-GAA | N/A | PheGAA | N/A | N/A |
TRNAP-AGG | N/A | ProAGG | N/A | N/A |
TRNAR-CCU | N/A | ProAGG | N/A | N/A |
TRNAP-CGG | N/A | ProCGG | N/A | N/A |
TRNAT-AGU | N/A | SerACT | N/A | N/A |
TRNAS-AGA | N/A | SerAGA | N/A | N/A |
TRNAP-UGG | N/A | TrpCCA | N/A | N/A |
TRNAV-AAC | N/A | ValAAC | N/A | N/A |
tDR-001271 | N/A | N/A | N/A | N/A |
tDR-001276 | N/A | N/A | N/A | N/A |
tDR-006049 | N/A | N/A | N/A | N/A |
tDR-006826 | N/A | N/A | N/A | N/A |
tRF-1001 | N/A | N/A | N/A | N/A |
tRF-18-BS68BFD2 | N/A | N/A | AACCGGGCGGAAACACCA | STK32A//LTBP3//ITGB3BP//DENND6A//CDYL//HNRNPH1//DNAJC5//SH3BP5L//LYPLA1//LPO |
tRF-18H9R8B7D2 | N/A | N/A | N/A | N/A |
tRF-25-R9ODMJ6B26 | N/A | N/A | GGTTCGAAACCGGGCGGAAACACCA | HECTD4//LTBP3//MTURN//RMND5A//ESR1//STK32A//MYO1G//ERAP1//MOV10//GNG2 |
tRF-3031B | N/A | N/A | N/A | N/A |
tRF-38-QB1MK8YUBS68BFD2 | N/A | N/A | GCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCA | FAM160B2//AKAP1//FANCM//GDF2//ITGB3BP//LRRC57//IL20RB//CORO1C//PCYT1A//PNPLA5 |
tRF-His-GTG-006 | N/A | N/A | N/A | N/A |
TRNAY-GUA | N/A | N/A | N/A | N/A |
tsRNA-08579 | N/A | N/A | N/A | N/A |
tsRNA-14777 | N/A | N/A | N/A | N/A |
tsRNA-14778 | N/A | N/A | N/A | N/A |
tsRNA-14783 | N/A | N/A | N/A | N/A |
tsRNA-21109 | N/A | N/A | N/A | N/A |
tsRNA-22025 | N/A | N/A | N/A | N/A |