Entry Detail



General Information

Database ID:TRD00232
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tiRNA-iMet-CAT-001
tsRNA Type:5'-tiRNA
Amino acid and Anticodon:iMetCAT
Sequence:AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCC
Related Target:N/A
Predicted Target:TBC1D5//SIRPB1//IFIH1//SRPX//LHX6//ZNF579//SETD4//SRRM2//ZFAND3//CCL14
External Links:
MINTbase ID:tRF-33-FP18LPMBQ4NKDJ
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-iMet-CAT-2-1
Anticodon:MetCAT
tRNA_number:trna61
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27745664        End Site(bp): 27745696

[2] gtRNAdb_ID:tRNA-iMet-CAT-1-1
Anticodon:MetCAT
tRNA_number:trna32
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 153643726        End Site(bp): 153643758

[3] gtRNAdb_ID:tRNA-iMet-CAT-1-8
Anticodon:MetCAT
tRNA_number:trna20
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 80452636        End Site(bp): 80452668

[4] gtRNAdb_ID:tRNA-iMet-CAT-1-7
Anticodon:MetCAT
tRNA_number:trna129
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27870310        End Site(bp): 27870342

[5] gtRNAdb_ID:tRNA-iMet-CAT-1-6
Anticodon:MetCAT
tRNA_number:trna142
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27560639        End Site(bp): 27560671

[6] gtRNAdb_ID:tRNA-iMet-CAT-1-5
Anticodon:MetCAT
tRNA_number:trna150
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27300803        End Site(bp): 27300835

[7] gtRNAdb_ID:tRNA-iMet-CAT-1-4
Anticodon:MetCAT
tRNA_number:trna169
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26330568        End Site(bp): 26330600

[8] gtRNAdb_ID:tRNA-iMet-CAT-1-3
Anticodon:MetCAT
tRNA_number:trna171
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26313391        End Site(bp): 26313423

[9] gtRNAdb_ID:tRNA-iMet-CAT-1-2
Anticodon:MetCAT
tRNA_number:trna2
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26286754        End Site(bp): 26286786



tsRNA Association Statistics

Total Associated Disease Number:21
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D019636DOID:1289
Disease Name:Neurodegenerative Diseasesneurodegenerative disease
Category:MeSHDisease Ontology
Type:Nervous System Diseasesdisease of anatomical entity
Define:Hereditary and sporadic conditions which are characterized by progressive nervous system dysfunction. These disorders are often associated with atrophy of the affected central or peripheral nervous system structures.A central nervous system disease that results in the progressive deterioration of function or structure of neurons.
Alias:Degenerative Diseases, Central Nervous System//Degenerative Diseases, Nervous System//Degenerative Diseases, Neurologic//Degenerative Diseases, Spinal Cord//Degenerative Neurologic Diseases//Degenerative Neurologic Disorders//Nervous System Degenerative Diseases//Neurodegenerative Disorders//Neurologic Degenerative Conditions//Neurologic Degenerative Diseases//Neurologic Diseases, Degenerativedegenerative disease



Disease Association Statistics

Total Associated tsRNA Number:124
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:34269214
Disease Name:Neurodegenerative Diseases
Tissue:N/A
Dysfunction Pattern:N/A
Validated Method:High-throughput sequencing
Description:Based on microRNA-like seed matching and Pearson correlation analysis,57 differentially expressed tsRNA-mRNA interaction pairs were identified,including 29 tsRNAs and 26 mRNAs.
Comparision:N/A
Mechanism:N/A