The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tRF-20-S998LO9D | tRF-5 | ArgTCT | GTCTCTGTGGCGCAATGGAC | GABRB3//ACVR2B//ALDH7A1//HES7//FBH1//PXYLP1//EFCAB5//SEPTIN1//VSIG10L2//TBC1D5 |
| tRF-25-9M739P8WQ0 | i-tRF | GluTTC | TGGTCGTGGTTGTAGTCCGTGCGAG | ACAD9//CACNG8//CPAMD8//SLC30A1//SEPTIN4//RSPO2//FAM181B//TSNAXIP1//RREB1//PACS2 |
| tRF-41-YDLBRY73W0K5KKOVD | 3'-tiRNA | AsnGTT | TTAACCGAAAGGTTGGTGGTTCGAGCCCACCCAGGGACGCC | GFOD1//PITPNM2//ZFP69//GDAP1L1//ACVRL1//SIN3A//GRHL2//NLGN2//SLC26A1//ZNF280B |
| tRF-31-PER8YP9LON4VD | 5'-tiRNA | GluTTC | GCAATGGTGGTTCAGTGGTAGAATTCTCGCC | ABLIM2//C8orf82//PTCD3//DPF1//SAMHD1//LPAR1//SLC26A6//C9orf129//KPNA6//PLA2R1 |
| tRF-35-86V8WPMN1E8Y7Z | 5'-tiRNA | GluTTC | TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTT | CYB561A3//SGMS2//MOB3C//PPP1R26//KMT2B//COL4A3//WSCD2//SRGAP2C//CCDC24//GTF3C4 |
| tRF-31-PNR8YP9LON4VD | 5'-tiRNA | GlyCCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGCC | LPAR1//DPF1//ABLIM2//ANAPC2//ST3GAL2//CLIP1//ERAS//ZNF592//ZG16B//SLC26A6 |
| tRF-33-P4R8YP9LON4VDP | 5'-tiRNA | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTG | FCGR2A//B4GALNT4//ZNF513//CNTLN//TGIF2LX//TGIF2LY//DPF1//LPAR1//AATK//F2RL2 |
| tiRNA-His-GTG-001 | 5'-tiRNA | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTG | SHF//EVPLL//AC010422.3//MAN2B1//ZNF497//MFGE8//SHANK2//ARHGAP25//DDB1//SUSD5 |
| tiRNA-1:34-Lys-CTT-1-M2 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTC | EBI3//WDR54//BCL7C//GNA14//ZBTB17//CFAP410//GRK3//CFAP43//ZDHHC3//GPER1 |
| tRF-31-6978WPRLXN4VE | 5'-tiRNA | ProAGG;ProCGG;ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGCT | KCNJ4//STAB2//NOMO3//NOMO2//BLMH//HMGN2//PRDM7//LEMD3//KEAP1//ZSWIM8 |
| tiRNA-Val-CAC-001 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
| tRF-31-PIR8YP9LON4VD | 5'-tiRNA | ValCAC;GlyCCC | GCACTGGTGGTTCAGTGGTAGAATTCTCGCC | LPAR1//ST3GAL2//ABLIM2//ERAS//C8orf82//ANAPC2//ZNF592//ZG16B//TTLL7//NTMT1 |
| tRF-20-M0NK5Y93 | i-tRF | ArgCCG | CGGAGCTGGGGATTGTGGGT | CDCP2//AL357673.1//MUC5B//TMEM150C//MUC12//C1orf159//SLC39A13//MAOA//MROH1//RILP |
| tRF-26-MI7O3B1NR8E | i-tRF | AsnGTT | CGGCTGTTAACCGAAAGGTTGGTGGT | PI4KB//SKOR2//PDE4DIP//KPNA6//ESPN//TRPM7//PTPRD//KIF13B//IFIT3//GFAP |
| tRF-23-3196L85DD4 | i-tRF | AspGTC | CCGCCTGTCACGCGGGAGACCGG | FCGR2A//ADSSL1//PGR//OR2K2//ACTR3C//WAC//CDC34//OBSCN//SYT12//ZC3H12D |
| tRF-26-XIP2801MK8E | i-tRF | CysGCA | TGACTGCAGATCAAGAGGTCCCCGGT | SHANK2//FAM135A//LRIG3//ZNF517//AK1//AL157935.2//GLI3//PRR29//RNF152//PIK3CB |
| tRF-27-QR535Z8LZBQ | i-tRF | CysGCA | GCTCCGAGGTGATTTTCATATTGAATT | CDK19//ZBTB18//PEX5L//SBNO1//EFEMP2//XAB2//ERAP2//MRPS16//MYLK2//RYR3 |
| tRF-20-I8W47W1R | i-tRF | GluTTC | ATTGGTCGTGGTTGTAGTCC | KLK1//ACE2//AC097625.2//CACNG8//MMP2//MUC5B//ACAD9//GALK1//ZNF347//FUT11 |
| tRF-30-MIF91SS2P46I | i-tRF | LysCTT | CGGCTAGCTCAGTCGGTAGAGCATGGGACT | COMMD2//MAN2C1//ZBTB17//EBI3//N4BP1//RPS6KA2//TSPAN4//CCNI2//TEX45//LTBP3 |
| tRF-35-V0J8O9YEKPRS93 | i-tRF | LysCTT | TAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGT | ATP11A//SMARCC2//RBFOX1//IP6K2//SLC37A2//SLC39A1//EPN3//ANKRD34B//ELAVL1//PARP1 |
| tRF-22-8LHYD33UN | i-tRF | MetCAT | TCATAATCTGAAGGTCCTGAGT | OTULIN//MAP1LC3B//ADGRA3//RAD1//FHAD1//ZNF304//ZNF112//ZNF583//JAKMIP2//VLDLR |
| tRF-18-MBQ4NKDJ | i-tRF | MetCAT;ThrCGT | CGGAAGCGTGCTGGGCCC | TBC1D5//PAFAH1B1//NRDE2//PTAFR//MAD2L2//CCL14//ASIC2//GTF3C4//APTX//ALG13 |
| tRF-26-HFNBDWY2MJE | i-tRF | PheGAA | ATACACTGAAAATGTTTAGACGGGCT | IPO9//LRP2//CDH7//ZNF10//FGF11//GPATCH2L//TMEFF1//ELOVL6//MSANTD3-TMEFF1//PANK1 |
| tRF-23-4ER81XDD0Q | i-tRF | ProTGG | CTAATGGTGGAGTTAAAGACTTT | CHST9//ZNF841//EPHA7//TUNAR//COMMD2//RPS6KA1//SUDS3//ERBB4//BTBD3//XKR4 |
| tRF-18-DI2OOIDW | i-tRF | SerGCT | AAGCTCACAAGAACTGCT | ZNF540//SYNPO2//SYNPO//MTMR3//GOLGA1//MAML3//ZBTB40//PCDH1//TYR//ZNF248 |
| tRF-20-BY4D84KR | i-tRF | SerGCT | AACTGCTAACTCATGCCCCC | MFGE8//C20orf27//LRRC59//FBN3//EMC10//ANKRD28//KIAA1614//PGPEP1//MANBA//LGI4 |
| tRF-27-FDXXE6XRK45 | i-tRF | SerGCT | AGAACTGCTAACTCATGCCCCCATGTC | DBF4//LRRC59//ZNF618//ANKRD16//FBN3//TIAF1//DNMT3A//AATK//GGT6//LRP4 |
| tRF-19-3L7L73JD | i-tRF | ValAAC;ValCAC | CCGTAGTGTAGTGGTTATC | FUT2//CTNND2//NEFL//USP50//MUSK//VRK2//USP19//RGS8//KRTAP19-8//SGMS1 |
| tRF-31-U5YKFN8DYDZDD | i-tRF | ValTAC | TACACTTAGGAGATTTCAACTTAACTTGACC | NLRP14//CSMD2//MT-ND6//ZNF280D//TTC39A//KCNRG//TRIM13//ADSSL1//RRM1//CLCN4 |
| tRF-17-18VBY9M | i-tRF | N/A | AGTGGTAGAATTCTCGC | FCGR2A//HSPB2//HSPB2-C11orf52//ATE1//SIRT5//ARHGAP23//NCALD//SRGAP1//FAT3//C6orf47 |
| tRF-Val-CAC-016 | tRF-1 | ValCAC | AAGTGGTTCCCGTTT | ZNF468//ZNF320//MORN3//ZNF28//MUC4//CNTNAP5//BEND7//TRMT10C//ZNF793//CACNA1D |
| 3'tRF-CAT1 | tRF-3 | AlaAGC | TCCCCAGTACCTCCACCA | SEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G |
| tRF-3019a | tRF-3 | AlaAGC | TCCCCAGTACCTCCACCA | SEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G |
| tRF-18-HRMFWRV | tRF-3 | AlaCGC;AlaTGC | ATCCCCGGCATCTCCACC | SEC14L1//PABPN1//GLI2//FRMPD4//FAM171A2//CARD6//RAB43//ISY1-RAB43//RIC3//PLXNB1 |
| tRF-38-YO1N3KYUSR681SD2 | tRF-3 | ArgTCT | TTCAAAGGTTCCGGGTTCGAGTCCCGGCGGAGTCGCCA | HES7//C1QTNF8//MON1A//BAG3//ZNF213//SGSM2//NEURL2//ATP9A//REXO1//POU2F1 |
| tRF-17-WS7K092 | tRF-3 | GlnTTG | TCTCGGTGGGACCTCCA | TOR3A//SLC4A8//TMEM132A//ST3GAL4//PCDHGC4//DKKL1//TGFBR3L//SGSM2//DMBT1//COL11A1 |
| tRF-18-07QSNHD2 | tRF-3 | SerTGA | ACCCTGCTCGCTGCGCCA | SACM1L//CENPN//CSPG5//VPS51//CHID1//CNOT6//CLDN1//CIDEA//SFRP1//MAFK |
| hsa_tsr013526 | tRF-3 | ValAAC | AACCGGGCGGAAACACC | LTBP3//STK32A//LYPLA1//HNRNPH1//DENND6A//DNAJC5//CLIP2//CDYL//SH3BP5L//MS4A4E |
| tRF-60:76-Val-CAC-2 | tRF-3 | ValCAC | N/A | N/A |
| tRF-21-2N37WX01B | tRF-3 | ValTAC | CAATTCCTCTTCTTAACACCA | PGPEP1//FANCE//GALNT15//SYNPO//ERICH6//IGSF9B//FAIM2//VWA5B1//HDGF//EPRS |
| tRF-22-8E89YZB52 | tRF-3 | ValTAC | TCAATTCCTCTTCTTAACACCA | GALNT15//SYNPO//ERICH6//IGSF9B//FAIM2//ZW10//CENPB//OR52I1//VWA5B1//HES2 |
| tRF-3017A | tRF-3 | ValTAC | AGCCCCAGTGGAACCACCA | MDC1//GIMAP4//LIN7B//MARCH1//GIGYF2//NFKB1//PLCE1//SV2C//RASAL3//TESMIN |
| tRF-37-JBRR93W0K672052 | tRF-3 | ValTAC | CAGAAGGTCCTGGGTTCGAGCCCCAGTGGAACCACCA | LIN54//MLXIP//SEZ6//ARHGEF5//PRPSAP2//LIN7B//DUSP18//MAPKAPK5//DDX31//AMELY |
| tRF/miR-1280 | tRF-3 | N/A | AGGGTGGCGACGGT | EGLN2//DMRT3//PHETA1//AGO3//GARS//EVI5L//NRF1//MRPL2//TSC22D2//CAV1 |
| hsa_tsr016141 | tRF-5 | GlnTTG | GGTCCCATGGTGTAATGGTTAGCACTCTG | NEFL//PDGFRB//TMEM184A//HAAO//NEK10//CFAP77//ALPK2//HAGHL//NBEAL2//C19orf85 |
| tRF-24-V29K9UV3IU | tRF-5 | GlnTTG | TAGGATGGGGTGTGATAGGTGGCA | VSIG10L//KRBA1//ZNF831//SLC16A5//VAC14//IGF2BP1//NRP2//SLC26A9//YWHAE//PCNX1 |
| tRF-30-RRJ89O9NF5W8 | tRF-5 | GlnTTG | GGTCCCATGGTGTAATGGTTAGCACTCTGG | NEFL//PDGFRB//C19orf85//TEC//HAAO//FAM53B//AC068896.1//NEK10//RASSF8//UBE2J1 |
| tRF-27-87R8WP9N1E5 | tRF-5 | GluCTC | TCCCTGGTGGTCTAGTGGTTAGGATTC | TFCP2L1//CHRNA1//SLC25A48//TUBA1B//PDE12//ARMCX4//EME2//MYOZ1//EHMT1//COX6A1 |
| tRF-28-86J8WPMN1E0J | tRF-5 | GluTTC | TCCCACATGGTCTAGCGGTTAGGATTCC | PPP1R26//COLGALT1//ZNF654//SGMS2//SLC5A11//THUMPD3//MMP25//UTP4//CLEC18A//CLEC18B |
| tRF-29-86V8WPMN1EJ3 | tRF-5 | GluTTC | TCCCATATGGTCTAGCGGTTAGGATTCCT | PPP1R26//CYB561A3//ZNF654//CLEC18A//CLEC18C//CLEC18B//SGMS2//COLGALT1//NAALADL1//EPHB6 |
| 5'-tRF-GlyGCC-n | tRF-5 | GlyGCC | N/A | N/A |
| tRF-28-P4R8YP9LOND5 | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTC | FCGR2A//SORCS1//HSD17B4//POLR1A//MRPS5//SP3//PPARGC1B//TNS2//DDI1//CDCP2 |
| tRF-29-P4R8YP9LONHK | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCG | FCGR2A//POLR1A//SORCS1//HSD17B4//PPARGC1B//PTCD3//MRPS5//SP3//OTUB2//TNS2 |
| tRF-30-FQR47673FEWS | tRF-5 | GlyGCC | AGCATGGGTGGTTCAGTGGTAGAATTCTCG | FCGR2A//POLR1A//SORCS1//PPARGC1B//HSD17B4//PTCD3//MRPS5//OTUB2//SP3//NPAS3 |
| tRF-30-P4R8YP9LON4V | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//SORCS1//POLR1A//ZNFX1//PPARGC1B//HSD17B4//PTCD3//PLA2R1//ITPKB//LPAR1 |
| tRF-30-XQR47673FEWS | tRF-5 | GlyGCC | TGCATGGGTGGTTCAGTGGTAGAATTCTCG | FCGR2A//SORCS1//POLR1A//HSD17B4//PTCD3//MRPS5//PPARGC1B//B4GALNT4//SP3//OTUB2 |
| tRF-30-XSXMSL73VL4Y | tRF-5 | HisGTG | TGCCGTGATCGTATAGTGGTTAGTACTCTG | SHF//OTUB2//FAM49B//RBMXL2//CXCL16//TEP1//COX7B//SEMA4G//SUSD5//LRP4 |
| tRF-18-S3M83004 | tRF-5 | SerAGA;SerTGA | GTAGTCGTGGCCGAGTGG | PLEKHH3//ADAT3//TMEM79//SOX1//SLC24A4//CLDN5//ARID5B//ERCC3//CREB3L1//ESPNL |
| tRF-24-6VR8K09LE9 | tRF-5 | ThrCGT | GGCGCGGTGGCCAAGTGGTAAGGC | CDX2//ZFP36L2//HHEX//MYL12B//YWHAZ//COG4//LTBP3//ROBO1//THBS1//SH3PXD2B |
| tRF-18-79MP9P04 | tRF-5 | ValAAC;ValCAC | GTTTCCGTAGTGTAGTGG | ZBED2//CTNND2//TREM2//ANO1//FOS//RGS8//MPP7//CEL//ELMO3//C5 |
| tRF-5026a | tRF-5 | ValAAC;ValCAC | GTTTCCGTAGTGTAGTGG | ZBED2//CTNND2//TREM2//ANO1//FOS//RGS8//MPP7//CEL//ELMO3//C5 |
| tRF-23-Q99P9P9NDD | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATC | SLC16A7//MRPL42//KCMF1//MDM4//RGS8//KCNK5//EARS2//TCP10//FNTB//CHURC1-FNTB |
| tRF-58:75-Ala-AGC-1 | N/A | AlaAGC | N/A | N/A |
| tRF-Gln-CTG | N/A | GlnCTG | N/A | N/A |
| tRF-59:75-Gln-TTG-1-M3 | N/A | GlnTTG | N/A | N/A |
| tRF-+1:T23-chrM.Glu-TTC | N/A | GluTTC | N/A | N/A |
| tRF-Glu-TTC-027 | N/A | GluTTC | N/A | N/A |
| tRF-1:32-Gly-GCC-1 | N/A | GlyGCC | N/A | N/A |
| tRF-Leu-AAG | N/A | LeuAAG | N/A | N/A |
| tRF-69:86-Leu-CAG-1 | N/A | LeuCAG | N/A | N/A |
| i-tRF-AsnGTT | N/A | N/A | N/A | N/A |
| tiRNA-5034-GLUTC-2 | N/A | N/A | N/A | N/A |
| tRF-16-ROD8N0E | N/A | N/A | GGTAAAATGGCTGAGT | HMGCR//SETD7//TRDMT1//ZKSCAN2//METTL25//RABEPK//HPN//ACSBG1//EXO1//STK38 |
| tRF-18-D12OOIDW | N/A | N/A | N/A | N/A |
| tRF-20-18W47W1R | N/A | N/A | N/A | N/A |
| tRF-20-M0NK5Y93 | N/A | N/A | CGGAGCTGGGGATTGTGGGT | CDCP2//AL357673.1//MUC5B//TMEM150C//MUC12//C1orf159//SLC39A13//MAOA//MROH1//RILP |
| tRF-23-Q99P9P9NDD | N/A | N/A | GCTTCTGTAGTGTAGTGGTTATC | SLC16A7//MRPL42//KCMF1//MDM4//RGS8//KCNK5//EARS2//TCP10//FNTB//CHURC1-FNTB |
| tRF-24-6VR8K09LE9 | N/A | N/A | GGCGCGGTGGCCAAGTGGTAAGGC | CDX2//ZFP36L2//HHEX//MYL12B//YWHAZ//COG4//LTBP3//ROBO1//THBS1//SH3PXD2B |
| tRF-24-V29-K9-UV-3-IU | N/A | N/A | N/A | N/A |
| tRF-29-79MP9P9NH525 | N/A | N/A | GTTTCCGTAGTGTAGTGGTTATCACGTTC | ZBED2//CTNND2//SREBF2//TNFRSF10B//NEFL//LDLRAD1//FAM171A1//MYH6//ADAR//HK2 |
| tRF-29-R9J8909NF5JP | N/A | N/A | N/A | N/A |
| tRF-3019A | N/A | N/A | N/A | N/A |
| tRF-33-P4R8YP9LON4VDP | N/A | N/A | GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTG | FCGR2A//B4GALNT4//ZNF513//CNTLN//TGIF2LX//TGIF2LY//DPF1//LPAR1//AATK//F2RL2 |
| tRF-38YO1N3KYUSR681SD2 | N/A | N/A | N/A | N/A |