Associated tsRNAs in Spotted Fever Group Rickettsiosis

tsRNA_NametsRNA_TypeAnticodonSequenceTarget_Gene
AS-tDR-0002053'-tiRNAN/AN/AN/A
tiRNA-Glu-CTC-0015'-tiRNAGluCTCTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTFCP2L1//PAQR4//EME2//TMEM69//RFTN1//TMEM92//CCDC159//PFKFB3//SLC25A48//TPCN2
AS-tDR-0012895'-tiRNAGlyGCCGCATGGGTGGTTCAGTGGTAGAATTCTCGCCTFCGR2A//B4GALNT4//LPAR1//AATK//DPF1//ZNFX1//NLGN3//EIF3G//NDUFAF1//WDFY4
tRF5-GlyGCC5'-tiRNAGlyGCCGCATTGGTGGTTCAGTGGTAGAATTCTCGCCTFCGR2A//LPAR1//DPF1//ABLIM2//ERAS//ST3GAL2//SLC26A6//COL6A5//ANAPC2//DNAH12
tiRNA-Gly-TCC-0035'-tiRNAGlyTCCN/AN/A
tiRNA-Met-CAT-0015'-tiRNAMetCATN/AN/A
tiRNA-Ser-GCT-0015'-tiRNASerGCTAAGAAAGATTGCAAGAACTGAP1G1//MESP1//TBK1//YME1L1//OR11H4//PHTF2//CNBD1//PSMD9//GPR180//TAPT1
tiRNA-Val-CAC-0015'-tiRNAValCACGCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTCZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C
tiRNA-Val-CAC-0035'-tiRNAValCACGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTCZBED2//CTNND2//SLC12A5//CDYL2//KIAA1549//STK36//CELA2A//ACAP1//CDC25C//HK2
AS-tDR-0008865'-tiRNAN/AN/AN/A
AS-tDR-0008945'-tiRNAN/AN/AN/A
AS-tDR-0012695'-tiRNAN/AN/AN/A
AS-tDR-0012705'-tiRNAN/AN/AN/A
AS-tDR-0012975'-tiRNAN/AN/AN/A
AS-tDR-0013635'-tiRNAN/AGCCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTEBI3//COMMD2//NHLRC1//FLYWCH1//NAAA//MKNK1//RPS6KA2//ATXN2//SPIRE2//USP24
tRF-21-NB8PLML3Ei-tRFGlnCTGCGTAATCCAGCGATCCGAGTTRTF1//DNAH7//TENT5B//NEURL1//MARVELD2//PPP1R9A//C1orf159//PCDHB14//NPHP4//NUDT21
tRF-19-SWRYVMH0i-tRFGluTTCGTCGTGGTTGTAGTCCGTGCACNG8//MMP2//GALK1//NUBP2//YY2//NR6A1//C5AR1//CPAMD8//SOX21//DGKG
tRF-21-SWRYVMMV0i-tRFGluTTCGTCGTGGTTGTAGTCCGTGCGCACNG8//C5AR1//MMP2//IRF2BP1//FAM184A//ZNF688//FZD8//TCP1//B4GALT7//SYNGR1
tRF-30-3JVIJMRPFQ5Di-tRFLysCTTCCGGCTAGCTCAGTCGGTAGAGCATGAGACCOMMD2//RPS6KA2//CFAP410//B3GNT4//EBI3//ALG14//CSRNP2//CD69//PES1//INTS6
tRF-16-Q622EVEi-tRFSerGCTGCTCACAAGAACTGCTZNF540//MTMR3//SYNPO//SYNPO2//MAML3//GOLGA1//ZBTB40//ZNF248//PTPRZ1//ZCCHC2
tRF-19-8FFDXXE5i-tRFSerGCTTCACAAGAACTGCTAACTCMSH2//ZNF618//CNOT6L//MPDZ//ZNF248//SORT1//XKR4//RAB21//MAML3//ZNF540
tRF-Ala-TGC-066tRF-1AlaTGCN/AN/A
tRF-Arg-ACG-017tRF-1ArgACGN/AN/A
tRF-58:74-Gly-GCC-1tRF-1GlyGCCN/AN/A
AS-tDR-000123tRF-1N/AN/AN/A
AS-tDR-007245tRF-1N/AN/AN/A
AS-tDR-007294tRF-1N/AN/AN/A
AS-tDR-007326tRF-1N/AN/AN/A
AS-tDR-000102tRF-3AlaCGCN/AN/A
tRF-3-tRNA-Ala-TGC-4-1tRF-3AlaTGCN/AN/A
tRF-3-tRNA-Asp-GTC-2-7tRF-3AspGTCN/AN/A
tRF-3028b/3029btRF-3GluTTC;GluCTC;PheGAAN/AN/A
tRF-3009atRF-3LeuTAAACCCCACTCCTGGTACCAANKRD27//DTWD1//SHANK3//ELN//GDF6//CCDC88C//SLC39A13//ACE//ID4//AC011498.4
tRF-Phe-GAA-012tRF-3PheGAACATCACCCCATAAACACCAZNF630//AHNAK//TMEM8B//PKP3//FADS2//MOB3B//MED1//APEH//FBXO3//KRT1
tRF-Phe-GAA-031tRF-3PheGAAN/AN/A
tRF-Pro-TGG-001tRF-3ProTGGCGCGCAAAGACTTTTTCTCTGACCASNX29//VCPIP1//SLC22A2//MPRIP//GSDMB//GRWD1//FAIM2//CFTR//CAMSAP2//TSPAN11
tRF-Pro-TGG-002tRF-3ProTGGN/AN/A
tRF-Pro-TGG-003tRF-3ProTGGAGACTTTTTCTCTGACCARPL28//PHEX//TASOR2//TSC22D1//FLG//RNFT1//PRMT2//PRKAG3//MPRIP//PRKD1
tRF-Trp-TCA-005tRF-3TrpTCAATACTTAATTTCTGCCANPIPB6//OR2V1//PPP6R3//NPIPB7//NIPBL//RBM7//SELL//CEP41//AC138894.1//ZMYM5
tRF-Tyr-GTA-005tRF-3TyrGTATCCGGCTCGAAGGACCAKLHDC4//GAD2//CHST3//CHD2//TMEM41A//IPO13//CCDC106//DUS2//NRROS//STMN3
tRF-Tyr-GTA-007tRF-3TyrGTATTCCGGCTCGAAGGACCAKLHDC4//GAD2//CHD2//TMEM41A//NRROS//CCDC106//IPO13//ATAD1//AP2A2//DUS2
tRF-Tyr-GTA-010tRF-3TyrGTAATCCGGCTCGAAGGACCAKLHDC4//GAD2//CHST3//CHD2//TMEM41A//CCDC106//NRROS//DUS2//IPO13//FAM135B
tRF-Tyr-GTA-011tRF-3TyrGTAATCCGGCTCGGAGGACCACCDC106//STMN3//CLK3//EPN2//C8orf58//TBX1//NMRAL1//RNF32//ADAMTS10//OSCAR
tRF-3-tRNA-Val-CAC-3-1tRF-3ValCACN/AN/A
tRF-26-YONONU3INDDtRF-3ValTACTTCAACTTAACTTGACCGCTCTGACCZBED9//FXYD6//MAP4//KCNK6//ST3GAL3//AL451062.3//POLE//PPM1F//SP100//DDR1
AS-tDR-006049tRF-3N/AN/AN/A
tRF-16-R29P4PEtRF-5AlaAGC;AlaCGC;AlaTGCGGGGATGTAGCTCAGTGPR84//CDK10//FARP1//C1orf94//WDR55//SGSM2//ENAH//DNASE1L3//GATA1//DYRK2
tRF5-AlatRF-5AlaCGCN/AN/A
tRF-5014atRF-5ArgACGGGGCCAGTGGCGCAATGGSSTR1//SEZ6//EIF2D//C1orf226//GJA3//SMPD4//PIEZO1//CTCFL//TAAR9//NLE1
tRF5-CysGCAtRF-5CysGCAN/AN/A
tRF5-GlnCTGtRF-5GlnCTGN/AN/A
5'tRFGluCTCtRF-5GluCTCN/AN/A
tRF5'-GluCTCtRF-5GluCTCN/AN/A
tRF5-GlutRF-5GluCTCN/AN/A
tRNA-Glu-CTCtRF-5GluCTCN/AN/A
tRF5-GlyCCCtRF-5GlyCCCN/AN/A
tRF5-GlyGCCtRF-5GlyGCCN/AN/A
tRNA-GlyGCCtRF-5GlyGCCGCATTGGTGGTTCAGTGGTAGAATTCTCGCFCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1
tRF5-GlytRF-5GlyTCCN/AN/A
tsRNA-5008atRF-5GlyTCCGCGTTGGTGGTATAGTGGTGAGCPHGDH//SPSB1//SLC6A9//ICAM5//ENDOG//CPHXL//ZNF775//MRPL54//CAPSL//SLC34A1
tRF5-Lys-CTTtRF-5LysCTTN/AN/A
tRF5-LysCTTtRF-5LysCTTN/AN/A
5'tRF-LysTTTtRF-5LysTTTN/AN/A
tRF-Lys-TTT-024tRF-5LysTTTCACTGTAAAGCTAACTANK3//FAM91A1//SNX12//MELTF//HAND2//NCKIPSD//TTLL3//APOB//NDE1//FGF13
tRF5-Lys-TTTtRF-5LysTTTN/AN/A
tRF-Met-CAT-002tRF-5MetCATN/AN/A
tRF-Met-CAT-012tRF-5MetCATN/AN/A
tRF-Pro-TGG-006tRF-5ProTGGN/AN/A
tRF-Pro-TGG-027tRF-5ProTGGN/AN/A
tRF5-ProtRF-5ProTGGN/AN/A
tRF-5013btRF-5ProTGG;ProCGG;ProAGGGGCTCGTTGGTCTAGGGGTATPTPRU//KCNJ4//SH3GL1//NOMO3//ANKRD10//NEK8//CAB39L//SMPD3//NOMO2//MORC2
tRF5-SelCystRF-5SecTCAN/AN/A
tRF-Ser-TGA-011tRF-5SerTGAGCAGCGATGGCCGAGTRNF139//SLC14A2//C12orf43//CACNA1D//CACNA1A//FANCE//NXPE3//SNAI3//RHAG//KAZN
tRF5-ThrtRF-5ThrTGTN/AN/A
5'tRF-ValCACtRF-5ValCACN/AN/A
tRF5-ValtRF-5ValCACN/AN/A
tRNA-ValCACtRF-5ValCACGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTCTNND2//ZBED2//SLC12A5//CDYL2//KIAA1549//HK2//NMT1//CELA2A//ACAP1//GPC6
tRF-Val-TAC-005tRF-5ValTACCAGAGTGTAGCTTAACIKZF4//TRO//DNHD1//UHMK1//GRK2//ITLN1//ISG20L2//APCDD1//CD1C//SOCS4
tRNA-Glu-CTCtRF-5N/AN/AN/A
tRF-Cys-GCA-022N/ACysGCAN/AN/A
tRFs4N/AGlnCTGGGTTCCATGGTGTAATGGTTAGCACTCTGGACTCNEFL//SLC25A48//DISC1//WDR66//RPL41//TSNAX-DISC1//FAM92B//C10orf67//EIF4ENIF1//GCNA
tiRNA-Gln-TTG-001N/AGlnTTGN/AN/A
Gly5-GluCTCN/AGluCTCN/AN/A
tRFs3N/AGluCTCTCCATGGTGGTCTAGTGGTTAGGATTCGGCTFCP2L1//NPY4R//NPY4R2//REC8//CCSER2//NFKBIL1//SLC7A4//PCNT//CXorf40B//SGSH
tRFs2N/AGluTTCTCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTCYB561A3//SGMS2//MOB3C//PPP1R26//CLEC18A//CLEC18C//CLEC18B//COL4A3//CCDC24//PAQR4
tRFs1N/AGlyGCCGCAATGGTGGTTCAGTGGTAGAATTCTCGCFCGR2A//PTCD3//C9orf129//OLFM3//C8orf82//PEG10//KPNA6//ZG16B//PLA2R1//LIMCH1
tRNA-GlyGCC_n1N/AGlyGCCGCGGATATAGTCGAATGGNAI2//ZSWIM8//PPFIA4//GART//TEX45//SNU13//DLG2//IFT140//GLI3//GGA2
tiRNA-His-GTG-004N/AHisGTGN/AN/A
tRNA-HisGUGN/AHisGTGGCGGATGTAGCCAAGTGCILP2//SERPINE2//C19orf25//SLC29A3//CHD3//PACS1//KIF5B//MAFG//VPS53//IGSF9B
tRF-Lys-CTT-026N/ALysCTTN/AN/A
tRF-Met-CAT-008N/AMetCATN/AN/A
tiRNA-Pro-TGG-001N/AProTGGN/AN/A
tRF-16-R29P4PEN/AN/AGGGGATGTAGCTCAGTGPR84//CDK10//FARP1//C1orf94//WDR55//SGSM2//ENAH//DNASE1L3//GATA1//DYRK2
tRF-3038bN/AN/AN/AN/A