The tsRNA and Disease Database (version 1.0)
tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
---|---|---|---|---|
tRF-20-S998LO9D | tRF-5 | ArgTCT | GTCTCTGTGGCGCAATGGAC | GABRB3//ACVR2B//ALDH7A1//HES7//FBH1//PXYLP1//EFCAB5//SEPTIN1//VSIG10L2//TBC1D5 |
tRF-20-6S7P4PWJ | tRF-5 | IleAAT | GGCCGGTTAGCTCAGTCGGC | GRWD1//PODNL1//PREX1//SRSF8//TNN//DTD1//KIFC2//CILP//CELA3B//RPL15 |
tRF-19-Q99P9PJZ | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGT | SLC16A7//FAHD2A//FNTB//CHURC1-FNTB//SENP8//CERCAM//RGS8//KCNK5//NKX2-3//TCP10 |
3'-tRNA-Asp-GUC-half | 3'-tiRNA | AspGTC | N/A | N/A |
ThrTGT-38 | 3'-tiRNA | ThrTGT | N/A | N/A |
ThrTGT-38 | 3'-tiRNA | ThrTGT | TTGTAAACCGGAGATGAAAACCTTTTTCCAAGGACACC | TYW5//LRP5L//UBAP2L//FUT9//MUC6//ATXN1L//DUSP22//SPG21//ST5//CSRNP3 |
ThrTGT-39 | 3'-tiRNA | ThrTGT | N/A | N/A |
ThrTGT-39 | 3'-tiRNA | ThrTGT | TTGTAAACCGGAGATGAAAACCTTTTTCCAAGGACACCA | TYW5//FUT9//LRP5L//ST5//PPRC1//UBAP2L//ATXN1L//CSRNP3//MUC6//FZD2 |
ArgCCG-33 | 5'-tiRNA | ArgCCG | N/A | N/A |
ArgCCG-33 | 5'-tiRNA | ArgCCG | GGCCGCGTGGCCTAATGGATAAGGCGTCTGATT | ZNF414//PRKCE//ADRA2B//TFPI2//DPM3//SLC7A8//YIPF6//SPNS1//HEMK1//SORL1 |
5'-tRNA-Asp-GUC-half | 5'-tiRNA | AspGTC | N/A | N/A |
SHOT-RNA | 5'-tiRNA | GlyGCC | N/A | N/A |
tiRNA-1:33-Gly-GCC-1 | 5'-tiRNA | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTG | FCGR2A//B4GALNT4//ZNF513//CNTLN//TGIF2LX//TGIF2LY//DPF1//LPAR1//AATK//F2RL2 |
tiRNA-Lys-CTT-001 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCC | NFKBID//EBI3//RPS6KA2//JPH1//WDR54//MOB2//GULP1//SEC61A1//PES1//PLXNA1 |
ProAGG-32 | 5'-tiRNA | ProAGG | N/A | N/A |
ProTGG-32 | 5'-tiRNA | ProAGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGGTT | ZSWIM8//OR2M3//SP3//BORCS8-MEF2B//ELFN2//BORCS8//NOMO3//NOMO2//PFN2//HERC2 |
ProAGG-32 | 5'-tiRNA | ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGCTT | KCNJ4//STAB2//NOMO2//NOMO3//BLMH//HMGN2//KEAP1//LEMD3//PRDM7//NOG |
ProTGG-32 | 5'-tiRNA | ProTGG | N/A | N/A |
tiRNA-Val-CAC-001 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
tRF-20-40KK5Y93 | i-tRF | ArgCCT | CTAAGCCAGGGATTGTGGGT | ARNT2//RAB37//RIMS3//ERGIC1//GMPPA//MYO1G//ACSS1//TCP11L1//C10orf82//FLNA |
GluTTC-23 | i-tRF | GluTTC | N/A | N/A |
GluTTC-23 | i-tRF | GluTTC | TCTAGCGGTTAGGATTCCTGGTT | ADAMTS10//RORA//RAB3D//BCAR1//DIRAS3//ZMYM3//ZNF385D//MCU//PRRT2//SYNE1 |
AS-tDR-008924 | tRF-1 | CysGCA | TGGTGGGTGCATATGTTTT | MRC1//DNM3//CPNE5//SPRR4//HDAC2//ELP1//SUSD2//TTPA//USP8//ZNF521 |
tRF-1001 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTATTT | GOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8 |
3'tRF-CAT1 | tRF-3 | AlaAGC | TCCCCAGTACCTCCACCA | SEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G |
tRF-Gln-CTG-005 | tRF-3 | GlnCTG | TCTCGGTGGAACCTCCA | ST3GAL4//TOR3A//FNDC11//FNBP1//DCAKD//ORC1//CRTAP//SYNE2//FHAD1//TP53BP2 |
tRF-Phe-GAA-001 | tRF-3 | PheGAA | TATATACCCGGGTTTCGGCACCA | NFATC3//NFE4//PKN3//LRP10//CSMD2//PHF20//TUBA4A//HAGHL//TNFSF12-TNFSF13//TNFSF13 |
tRF-Glu49 | tRF-3 | PheGAA;GluCTC;GluTTC | CGGGTTCGATTCCCGGTCAGGGAACCA | FCGR2A//KIF26B//GULP1//SLC13A5//LBH//OPRK1//NIBAN2//LYNX1//MAGEE1//ME3 |
tRF-Val-TAC-023 | tRF-3 | ValTAC | AACTTACACTTAGG | KIF18A//AFG1L//FAM53C//TRANK1//SERPINB8//RNF144B//C21orf58//CRTC1//UBE2D2//OOSP4A |
5'-tRNA-Arg-TCT-1-1_L19 | tRF-5 | ArgTCT | GGCTCCGTGGCGCAATGGA | HES7//PTP4A3//ELAVL2//FCAMR//SS18L1//ZNF579//RUNX1//COG7//C11orf42//KIF1B |
AsnATT-20 | tRF-5 | AsnATT | N/A | N/A |
AsnATT-20 | tRF-5 | AsnATT | GTCTCTGTGGCGCAATCGGT | AQP2//ZPLD1//CDS2//GRAPL//RADIL//ARF1//JAK1//TBC1D5//POTEF//ZNF628 |
tRF-Gln-CTG-003 | tRF-5 | GlnCTG | GGTTCCATGGTGTAATGGTTAGCACTCTGG | NEFL//RASSF8//PDGFRB//FAM92B//NOP16//ATP13A2//TEX37//C10orf67//C19orf85//EIF4ENIF1 |
5'tRF-Glu-CTC | tRF-5 | GluCTC | N/A | N/A |
5'tRFA-Glu-CTC | tRF-5 | GluCTC | N/A | N/A |
5'tRF-Gly-GCC | tRF-5 | GlyGCC | N/A | N/A |
GlyGCC-30-1 | tRF-5 | GlyGCC | N/A | N/A |
GlyGCC-30-1 | tRF-5 | GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1 |
GlyGCC-30-2 | tRF-5 | GlyGCC | N/A | N/A |
GlyGCC-30-2 | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//SORCS1//POLR1A//ZNFX1//PPARGC1B//HSD17B4//PTCD3//PLA2R1//ITPKB//LPAR1 |
tRF-Gly-GCC-002 | tRF-5 | GlyGCC | GCATAGGTGGTTCAGTGGTAGAATTCTT | FCGR2A//SP3//NDUFAF1//SMIM3//PRELP//OLFM3//ALOXE3//SNRNP200//C9orf129//AGBL3 |
AS-tDR-000744 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCG | SHF//ARHGAP25//EVPLL//SUSD5//OTUB2//RBMXL2//LHFPL6//FOXC1//PTPRN//ELK4 |
tRF-23-XSXMSL730H | tRF-5 | HisGTG | TGCCGTGATCGTATAGTGGTTAG | SHF//SFTA3//PLD1//SUSD5//SLCO2B1//CARS//HMBOX1//FKTN//CHST9//LAMA2 |
tRF-24-FSXMSL732Z | tRF-5 | HisGTG | AGCCGTGATCGTATAGTGGTTAGT | SHF//MUC5B//SFTA3//RGS21//CARS//DUSP10//LAMA2//FKTN//SUSD5//SLC22A23 |
tRF-24-XSXMSL732Z | tRF-5 | HisGTG | TGCCGTGATCGTATAGTGGTTAGT | SHF//MUC5B//SFTA3//FKTN//SUSD5//PLD1//SLC22A23//CARS//DUSP10//RGS21 |
tRF-His-GTG-009 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGT | SHF//EVPLL//ARHGAP25//SHANK2//DDB1//SUSD5//RBMXL2//FOXC1//OTUB2//AC010422.3 |
5'tRF-Lys-CTT | tRF-5 | LysCTT | N/A | N/A |
tRF-315 | tRF-5 | LysCTT | N/A | N/A |
ProAGG-31 | tRF-5 | ProAGG | N/A | N/A |
ProAGG-31 | tRF-5 | ProAGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGCT | KCNJ4//STAB2//NOMO3//NOMO2//BLMH//HMGN2//PRDM7//LEMD3//KEAP1//ZSWIM8 |
tRF-SeC-TCA-001 | tRF-5 | SecTCA | GCCCGGATGATCCTC | PPP1R3B//GLE1//ARMCX1//VSIG10L//DIPK1B//MAP2K7//RPS29//PAX5//TENM4//HERPUD1 |
tRF-1:28-Val-CAC-2 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTT | SREBF2//ZBED2//FNTB//CHURC1-FNTB//CASZ1//SCIN//STARD6//THOP1//PTPN14//TUBB |
5'-M-tRNA-Ala-TGC-4-1_L22 | N/A | AlaTGC | N/A | N/A |
5'-M-tRNA-Ala_TGC-4-1_L24 | N/A | AlaTGC | N/A | N/A |
5'-M-tRNA-Arg-ACG-2-4_L19 | N/A | ArgACG | N/A | N/A |
5'-tRNA-Arg-CCG-2-1_L30 | N/A | ArgCCG | N/A | N/A |
5'-M-tRNA-Arg-TCG-1-1_L19 | N/A | ArgTCG | N/A | N/A |
5'-M-tRNA-Arg-TCT-5-1_L19 | N/A | ArgTCT | N/A | N/A |
5'-M-tRNA-Cys-GCA-4-1_L29 | N/A | CysGCA | N/A | N/A |
5'-M-tRNA-Gln-CTG-5-1_L23 | N/A | GlnCTG | N/A | N/A |
5'-M-tRNA-Gln-CTG-5-1_L29 | N/A | GlnCTG | N/A | N/A |
5'-M-tRNA-Gln-CTG-5-1_L30 | N/A | GlnCTG | N/A | N/A |
5'-M-tRNA-Gln-TTG-3-3_L30 | N/A | GlnTTG | N/A | N/A |
5'-M-tRNA-Gln-TTG-41_L30 | N/A | GlnTTG | N/A | N/A |
5'-M-tRNA-GIu-CTC-2-1_L29 | N/A | GluCTC | N/A | N/A |
5'-M-tRNA-Glu-CTC-2-1_L28 | N/A | GluCTC | N/A | N/A |
5'-M-tRNA-Glu-CTC-2-1_L30 | N/A | GluCTC | N/A | N/A |
tRF-Glu-CTC-005 | N/A | GluCTC | N/A | N/A |
5'-M-tRNA-Glu-TTC-1-2_L16 | N/A | GluTTC | N/A | N/A |
5'-M-tRNA-Glu-TTC-1-2_L30 | N/A | GluTTC | N/A | N/A |
5'-M-tRNA-Glu-TTC-2-2_L28 | N/A | GluTTC | N/A | N/A |
5'-M-tRNA-Glu-TTC-2-2_L30 | N/A | GluTTC | N/A | N/A |
5'-tRNA-Glu-TTC-9-1_L30 | N/A | GluTTC | N/A | N/A |
5'-tRNA-Gly-TCC-1-1_L30 | N/A | GluTTC | N/A | N/A |
tRF-+1:T23-chrM.Glu-TTC | N/A | GluTTC | N/A | N/A |
tRF-Glu-TTC-2 | N/A | GluTTC | N/A | N/A |
5'-M-tRNA-Gly-CCC-2-2_L29 | N/A | GlyCCC | N/A | N/A |
5'-M-tRNA-Gly-yCCC-2-2_L15 | N/A | GlyCCC | N/A | N/A |
5'-M-tRNA-GIy-GCC-1-5_L29 | N/A | GlyGCC | N/A | N/A |
5'-M-tRNA-GIy-GCC-1-5_L30 | N/A | GlyGCC | N/A | N/A |
5'-M-tRNA-Gly-GCC-5-1_L27 | N/A | GlyGCC | N/A | N/A |
5'-M-tRNA-Gly-GCC-5-1_L28 | N/A | GlyGCC | N/A | N/A |
5'-M-tRNA-Gly-GCC-5-2_L29 | N/A | GlyGCC | N/A | N/A |
5'-M-tRNA-Gly-GCC-5-2_L30 | N/A | GlyGCC | N/A | N/A |
tRF-1:32-Gly-GCC-1 | N/A | GlyGCC | N/A | N/A |
tRF-Gly-GCC-002 | N/A | GlyGCC | N/A | N/A |
5'-M-tRNA-Gly-TCC-2-6_L30 | N/A | GlyTCC | N/A | N/A |
5'-M-tRNA-Gly-TCC-41_L23 | N/A | GlyTCC | N/A | N/A |
5'-M-tRNA-His-GTG-1-9_L30 | N/A | HisGTG | N/A | N/A |
5'-M-tRNA-Leu-CAG-2-2_L25 | N/A | LeuAAG | N/A | N/A |
5'-M-tRNA-Leu_CAG-2-2_L30 | N/A | LeuAAG | N/A | N/A |
5'-tRNA-Leu-TAA-1-1_L25 | N/A | LeuTAA | N/A | N/A |
5'-M-tRNA-Leu-CAG-2-2_L26 | N/A | LeuTAG | N/A | N/A |
5'-M-tRNA-Leu-TAG-1-1_L21 | N/A | LeuTAG | N/A | N/A |
5'-M-tRNA-Leu-TAG-1-1_L22 | N/A | LeuTAG | N/A | N/A |
5'-M-tRNA-Leu-TAG-1-1_L24 | N/A | LeuTAG | N/A | N/A |
5'-M-tRNA-Leu-TAG-1-1_L25 | N/A | LeuTAG | N/A | N/A |
5'-M-tRNA-Leu-TAG-1-1_L26 | N/A | LeuTAG | N/A | N/A |
5'-M-tRNA-Leu-TAG-1-1_L30 | N/A | LeuTAG | N/A | N/A |
5'-M-tRNA-Leu-TAG-3-1_L15 | N/A | LeuTAG | N/A | N/A |
5'-M-tRNA-Lys-CTT-3-1_L30 | N/A | LysCTT | N/A | N/A |
5'-M-tRNA-Lys-CTT-4-1_L30 | N/A | LysCTT | N/A | N/A |
5'-M-tRNA-Lys-TTT-5-1_L30 | N/A | LysTTT | N/A | N/A |
5'-M-tRNA-Met-CAT-2-1_L30 | N/A | MetCAT | N/A | N/A |
tRF-Pro-AGG-003 | N/A | ProAGG | N/A | N/A |
5'-M-tRNA-Pro-TGG-3-5_L30 | N/A | ProTGG | N/A | N/A |
5'-tRNA-Pro-TGG-2-1_L30 | N/A | ProTGG | N/A | N/A |
5'-M-tRNA-Ser-CGA-2-1_L25 | N/A | SerCGA | N/A | N/A |
5'-M-tRNA-Ser-GCT-5-1_L24 | N/A | SerGCT | N/A | N/A |
5'-M-tRNA-Ser-TGA-4-1_L15 | N/A | SerTGA | N/A | N/A |
5'-M-tRNA-Ser-TGA-4-1_L18 | N/A | SerTGA | N/A | N/A |
5'-M-tRNA-Ser-TGA-4-1_L24 | N/A | SerTGA | N/A | N/A |
5'-M-tRNA-Ser-TGA-4-1_L25 | N/A | SerTGA | N/A | N/A |
5'-M-tRNA-Thr-CGT-4-1_L24 | N/A | ThrCGT | N/A | N/A |
5'-M-tRNA-Tyr-GTA-3-1_L25 | N/A | TyrGTA | N/A | N/A |
5'-M-tRNA-Tyr-GTA-7-1_L23 | N/A | TyrGTA | N/A | N/A |
5'-M-tRNA-Tyr-GTA-7-1_L25 | N/A | TyrGTA | N/A | N/A |
5'-M-tRNA-Tyr-GTA-chr21-2_L30 | N/A | TyrGTA | N/A | N/A |
5'-tRNA-Val-AAC-2-1_L20 | N/A | ValAAC | N/A | N/A |
5'-tRNA-Val-AAC-2-1_L23 | N/A | ValAAC | N/A | N/A |
tRF-Val-AAC-010 | N/A | ValAAC | N/A | N/A |
5'-M-tRNA-Val-CAC-5-1_L23 | N/A | ValCAC | N/A | N/A |
5'-M-tRNA-VAl-CAC-5-1_L30 | N/A | ValCAC | N/A | N/A |
5'-M-tRNA-Val-CAC-7-1_L15 | N/A | ValCAC | N/A | N/A |
5'-tRNA-Val-CAC-8-1_L30 | N/A | ValCAC | N/A | N/A |
5'-M-tRNA-Val-TAC-1-2_L30 | N/A | ValTAC | N/A | N/A |
5'-M-tRNA-Val-TAC-3-1_L15 | N/A | ValTAC | N/A | N/A |
5'-tRNA-Val-TAC-2-1_L31 | N/A | ValTAC | N/A | N/A |
tRF-1:28-Val-CAC-2 | N/A | N/A | N/A | N/A |
tRF-1001 | N/A | N/A | N/A | N/A |
tRF-544 | N/A | N/A | N/A | N/A |
tRF-562 | N/A | N/A | N/A | N/A |