The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tRF-20-S998LO9D | tRF-5 | ArgTCT | GTCTCTGTGGCGCAATGGAC | GABRB3//ACVR2B//ALDH7A1//HES7//FBH1//PXYLP1//EFCAB5//SEPTIN1//VSIG10L2//TBC1D5 |
| tRF-20-6S7P4PWJ | tRF-5 | IleAAT | GGCCGGTTAGCTCAGTCGGC | GRWD1//PODNL1//PREX1//SRSF8//TNN//DTD1//KIFC2//CILP//CELA3B//RPL15 |
| tRF-19-Q99P9PJZ | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGT | SLC16A7//FAHD2A//FNTB//CHURC1-FNTB//SENP8//CERCAM//RGS8//KCNK5//NKX2-3//TCP10 |
| tRF-21-I8W47W1R0 | i-tRF | GluTTC | ATTGGTCGTGGTTGTAGTCCG | KLK1//CACNG8//ACE2//AC097625.2//GALK1//PLXNB3//MMP2//MUC5B//ACAD9//ERGIC2 |
| tiRNA-Arg-CCG-001 | 5'-tiRNA | ArgCCG | GACCCAGTGGCCTAATGGATAAGGCATCAGCCTC | OAZ3//NSMF//HPSE//SMG9//TTC30A//TMCC1//CIZ1//NAT10//SHC3//SEC31B |
| tiRNA-Gln-CTG-003 | 5'-tiRNA | GlnCTG | GGTTCCATGGTGTAATGGTTAGCACTCTGGACTC | NEFL//SLC25A48//DISC1//WDR66//RPL41//TSNAX-DISC1//FAM92B//C10orf67//EIF4ENIF1//GCNA |
| tiRNA-His-GTG-001 | 5'-tiRNA | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTG | SHF//EVPLL//AC010422.3//MAN2B1//ZNF497//MFGE8//SHANK2//ARHGAP25//DDB1//SUSD5 |
| tiRNA-Lys-CTT-001 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCC | NFKBID//EBI3//RPS6KA2//JPH1//WDR54//MOB2//GULP1//SEC61A1//PES1//PLXNA1 |
| tiRNA-Lys-CTT-002 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTC | EBI3//NFKBID//CHTF18//JPH1//TNFRSF11A//PES1//MGAT1//POM121C//ALG14//STX18 |
| tiRNA-Lys-CTT-005 | 5'-tiRNA | LysCTT | GCCCAGCTAGCTCAGTCGGTAGAGCATGAGACTC | NFKBID//TNFRSF11A//EBI3//MGAT1//PES1//ALG14//JPH1//INTS6//KCNC4//TEX51 |
| tiRNA-Val-AAC-002 | 5'-tiRNA | ValAAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTA | ZBED2//CTNND2//CDYL2//SLC12A5//KIAA1549//HK2//CLSTN3//CELA2A//ACAP1//LRRN3 |
| tiRNA-Val-CAC-001 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
| tiRNA-Val-CAC-002 | 5'-tiRNA | ValCAC | GTTTCCGTAGTGTAGCGGTTATCACATTCGCCTC | PLEKHG5//CDYL2//KLK10//GPC6//GALNTL6//ILRUN//SOCS2//SNX1//TRERF1//CIAO3 |
| tiRNA-Val-CAC-003 | 5'-tiRNA | ValCAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//CTNND2//SLC12A5//CDYL2//KIAA1549//STK36//CELA2A//ACAP1//CDC25C//HK2 |
| tiRNA-Val-TAC-003 | 5'-tiRNA | ValTAC | GGTTCCATAGTGTAGTGGTTATCACATCTGCTTT | CAMK1D//ZNF281//CYP4F3//TEDC1//ZC3H15//TMBIM6//FMNL3//ANK3//CD86//CYP4F2 |
| tiRNA-Val-TAC-004 | 5'-tiRNA | ValTAC | GGTTCCATAGTGTAGTGGTTATCACGTCTGCTTT | CAMK1D//ZNF281//CYP4F3//SCAF1//TEDC1//ZC3H15//TMBIM6//SLC35B2//DSP//CAST |
| AS-tDR-008924 | tRF-1 | CysGCA | TGGTGGGTGCATATGTTTT | MRC1//DNM3//CPNE5//SPRR4//HDAC2//ELP1//SUSD2//TTPA//USP8//ZNF521 |
| tRF-1001 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTATTT | GOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8 |
| tRF-03357 | tRF-1 | N/A | N/A | N/A |
| tRF-His-GTG-019 | tRF-2 | HisGTG | CAGATTGTGAATCT | ABCA2//CCDC9B//ZFAND3//TRAPPC8//NCR2//SAR1B//CCDC158//SEC24D//ST6GALNAC3//CDKN3 |
| 3'tRF-CAT1 | tRF-3 | AlaAGC | TCCCCAGTACCTCCACCA | SEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G |
| tRF-Ala-AGC-002 | tRF-3 | AlaAGC | CCCCGGCACCTCCACCA | MEGF8//SEC14L1//RETREG3//RAB43//ISY1-RAB43//PLXNB1//FAM171A2//SMTN//RIC3//DCHS1 |
| tRF-Ala-AGC-063 | tRF-3 | AlaAGC | TCGATCCCCAGTACCTCCACCA | TTLL3//SEC14L1//GNPTAB//UNC13C//NEO1//IFI44L//KLF14//COLGALT1//RIC3//CMKLR1 |
| tRF-Cys-GCA-004 | tRF-3 | CysGCA | TCCGGGTGCCCCCTCCA | VSX2//MAN1A1//PDGFC//POLR2H//FAM181B//JAKMIP1//C4orf50//PDZRN3//TSPY2//CLIC6 |
| tRF-Gln-CTG-005 | tRF-3 | GlnCTG | TCTCGGTGGAACCTCCA | ST3GAL4//TOR3A//FNDC11//FNBP1//DCAKD//ORC1//CRTAP//SYNE2//FHAD1//TP53BP2 |
| tRF-Gln-TTG-013 | tRF-3 | GlnTTG | TCTCGGTGGGACCTCCA | TOR3A//SLC4A8//TMEM132A//ST3GAL4//PCDHGC4//DKKL1//TGFBR3L//SGSM2//DMBT1//COL11A1 |
| tRF-Lys-TTT-012 | tRF-3 | LysTTT | AACACCTCTTTACAGTGACCA | KLK13//MTHFR//ITPRIPL1//TSPAN14//TNFAIP3//KNOP1//COPZ1//IQGAP2//EIF2B4//MOB3C |
| tRF-Lys-TTT-022 | tRF-3 | LysTTT | CACCTCTTTACAGTGACCA | TSPAN14//MTHFR//EIF2B4//KNOP1//NAV3//MOB3C//KLK13//IQGAP2//COPZ1//UBXN2B |
| tRF-Lys-TTT-029 | tRF-3 | LysTTT | CCTCTTTACAGTGACCA | MTHFR//NAV3//EIF2B4//PREP//CIC//STOML1//POLE//GCN1//COL12A1//AMH |
| tRF-Phe-GAA-001 | tRF-3 | PheGAA | TATATACCCGGGTTTCGGCACCA | NFATC3//NFE4//PKN3//LRP10//CSMD2//PHF20//TUBA4A//HAGHL//TNFSF12-TNFSF13//TNFSF13 |
| tRF-Tyr-GTA-011 | tRF-3 | TyrGTA | ATCCGGCTCGGAGGACCA | CCDC106//STMN3//CLK3//EPN2//C8orf58//TBX1//NMRAL1//RNF32//ADAMTS10//OSCAR |
| 3'U-tRFValCAC | tRF-3 | ValCAC | N/A | N/A |
| tRF-Val-TAC-023 | tRF-3 | ValTAC | AACTTACACTTAGG | KIF18A//AFG1L//FAM53C//TRANK1//SERPINB8//RNF144B//C21orf58//CRTC1//UBE2D2//OOSP4A |
| tRF-Arg-TCT-008 | tRF-5 | ArgTCT | GGCTCCGTGGCGCAATGGATAGCGCATTGG | HES7//TULP4//OR10J1//SLC25A29//DENND2A//DBNDD1//HIP1R//ADAMTS5//TRPT1//SLC25A18 |
| tRF-Gln-CTG-003 | tRF-5 | GlnCTG | GGTTCCATGGTGTAATGGTTAGCACTCTGG | NEFL//RASSF8//PDGFRB//FAM92B//NOP16//ATP13A2//TEX37//C10orf67//C19orf85//EIF4ENIF1 |
| tRF5-Glu | tRF-5 | GluCTC | N/A | N/A |
| tRNA-Glu-CTC | tRF-5 | GluCTC | N/A | N/A |
| tRF-Gly-CCC-005 | tRF-5 | GlyCCC | GCATTGGTGGTTCAATGGTAGAATTCTCGCCT | FCGR2A//LPAR1//ANAPC2//COL6A5//ACAN//ERAS//DPF1//AGBL3//SLC26A6//DNAH12 |
| tRF-Gly-TCC-012 | tRF-5 | GlyTCC | GCGTTGGTGGTATAGTGGTTAGCATAGC | PHGDH//SLC6A4//LRP1//OTOG//WNK4//ZBED3//CSMD2//C3//B3GALT5//ITPR1 |
| tRF-His-GTG-006 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTG | SHF//OTUB2//RBMXL2//FAM49B//TEP1//SEMA4G//CXCL16//OR13J1//ARID1A//COX7B |
| tRF-His-GTG-009 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGT | SHF//EVPLL//ARHGAP25//SHANK2//DDB1//SUSD5//RBMXL2//FOXC1//OTUB2//AC010422.3 |
| tRF-Leu-AAG-002 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAG | MRPS2//SLC39A8//PTBP1//TP73//DIP2B//HAPLN2//TRIL//RNF139//RUNX1//TM9SF1 |
| tRF-Leu-AAG-003 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAGC | TP73//MRPS2//RUNX1//SLC39A8//ZMYM2//PTBP1//FBXL22//CDT1//HEXA//TRIL |
| tRF-Leu-AAG-004 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAGT | MRPS2//TP73//SLC39A8//RUNX1//PTBP1//TRIL//MRPS26//ZMYM2//GPT//RNF139 |
| tRF-Leu-TAG-002 | tRF-5 | LeuTAG | GGTAGTGTGGCCGAGC | TP73//SORBS1//RUNX1//APOBEC3D//AL022318.4//MARCH4//MRPS2//AATK//SLC39A8//EDIL3 |
| tRF-Lys-TTT-011 | tRF-5 | LysTTT | GCCCGGATAGCTCAGTCGGTAGAGCATCAGAC | EBI3//URM1//RPS6KA1//GLG1//ARHGEF19//SEC24C//MMP21//PROM2//PFKP//GASK1A |
| tRF-SeC-TCA-001 | tRF-5 | SecTCA | GCCCGGATGATCCTC | PPP1R3B//GLE1//ARMCX1//VSIG10L//DIPK1B//MAP2K7//RPS29//PAX5//TENM4//HERPUD1 |
| tRF-Tyr-GTA-131 | tRF-5 | TyrGTA | GGTAAAATGGCTGAGTGAAGCATTGGACTGTA | BACH1//ATXN2//TK2//LLGL1//PTGFR//NPAS3//BAIAP2L1//LRRK1//ACTG2//DCAF8 |
| tRNA-Glu-CTC | tRF-5 | N/A | N/A | N/A |
| TRF396 | N/A | AlaAGC | GGGGGTATAGCTCAGCGGT | LRRC8C//LRAT//AC093423.3//EPOR//HSPG2//PPIP5K2//LATS2//PRSS8//PRR23C//LZTS2 |
| tiRNA-5030GlnTTG-3 | N/A | GlnTTG | N/A | N/A |
| TRF320 | N/A | HisGTG | TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG | TFCP2L1//SLC25A48//SLC25A6//EME2//NPY4R//NPY4R2//TAS1R3//CLEC14A//HIVEP3//MIA |
| tRF-Leu-AAG-001 | N/A | LeuAAG | N/A | N/A |
| tRF-Leu-AAG-001 | N/A | LeuAAG | ATCCCACCGCTGCCACCA | ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB |
| TRF308 | N/A | LysCTT | GCCCGACTACCTCAGTCGG | LIX1L//ELFN1//PIK3CA//GUCA1B//ANKRD27//GBA//VARS2//HOMER3//EHBP1L1//MARC1 |
| tiRNA-Val-CAC-002 | N/A | N/A | N/A | N/A |
| tRF-1001 | N/A | N/A | N/A | N/A |
| tRF-His-GTG-006 | N/A | N/A | N/A | N/A |
| tRF-T11 | N/A | N/A | N/A | N/A |
| TRF308 | N/A | N/A | N/A | N/A |
| TRF320 | N/A | N/A | N/A | N/A |
| TRF396 | N/A | N/A | N/A | N/A |
| tsrna-03939 | N/A | N/A | N/A | N/A |
| tsrna-03940 | N/A | N/A | N/A | N/A |
| tsrna-06176 | N/A | N/A | N/A | N/A |
| tsrna-06177 | N/A | N/A | N/A | N/A |
| tsrna-12359 | N/A | N/A | N/A | N/A |
| tsrna-12360 | N/A | N/A | N/A | N/A |
| tsrna-12361 | N/A | N/A | N/A | N/A |
| tsrna-12362 | N/A | N/A | N/A | N/A |
| tsrna-12363 | N/A | N/A | N/A | N/A |
| tsrna-12364 | N/A | N/A | N/A | N/A |
| tsrna-12365 | N/A | N/A | N/A | N/A |
| tsrna-12395 | N/A | N/A | N/A | N/A |
| tsrna-14934 | N/A | N/A | N/A | N/A |
| tsrna-14935 | N/A | N/A | N/A | N/A |
| tsrna-14937 | N/A | N/A | N/A | N/A |
| tsrna-15198 | N/A | N/A | N/A | N/A |
| tsrna-15199 | N/A | N/A | N/A | N/A |
| tsrna-15209 | N/A | N/A | N/A | N/A |
| tsrna-17099 | N/A | N/A | N/A | N/A |
| tsrna-17100 | N/A | N/A | N/A | N/A |