The tsRNA and Disease Database (version 1.0)
tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
---|---|---|---|---|
tiRNA5-Cys-GCA | 5'-tiRNA | CysGCA | N/A | N/A |
tsrna-23729 | 5'-tiRNA | CysGCA | GGGGGTATAGCTCAGTGGTAGAGCATTTGACTGC | UBA52//SLC22A1//IYD//NSMCE1//HIRA//C22orf39//CD200//CARMIL3//NLRP12//ETHE1 |
tsrna-25171 | 5'-tiRNA | GluCTC | CTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT | TFCP2L1//RFTN1//CCDC159//TMEM92//EME2//SLC25A48//FAM193B//PAQR4//CHRNB4//SLC25A6 |
AS-tDR-007301 | 5'-tiRNA | GluTTC | N/A | N/A |
AS-tDR-011075 | 5'-tiRNA | GluTTC | N/A | N/A |
AS-tDR-011144 | 5'-tiRNA | GluTTC | N/A | N/A |
tiRNA5-Glu-TTC | 5'-tiRNA | GluTTC | N/A | N/A |
tsrna-13349 | 5'-tiRNA | GluTTC | TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTT | CYB561A3//SGMS2//MOB3C//PPP1R26//KMT2B//COL4A3//WSCD2//SRGAP2C//CCDC24//GTF3C4 |
tiRNA5-Gly-GCC | 5'-tiRNA | GlyGCC | N/A | N/A |
tiRNA-His-GTG-001 | 5'-tiRNA | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTG | SHF//EVPLL//AC010422.3//MAN2B1//ZNF497//MFGE8//SHANK2//ARHGAP25//DDB1//SUSD5 |
tiRNA5-Lys-CTT | 5'-tiRNA | LysCTT | N/A | N/A |
AS-tDR-001391 | 5'-tiRNA | ProCGG | N/A | N/A |
i-tRF-Arg-CCT | i-tRF | ArgCCT | N/A | N/A |
AS-tDR-006580 | i-tRF | AspGTC | N/A | N/A |
i-tRF-Cys-GCA | i-tRF | CysGCA | N/A | N/A |
i-tRF-Glu-CTC | i-tRF | GluCTC | N/A | N/A |
tsrna-01888 | i-tRF | GluCTC | AGTGGTTAGGATTCGGCGCT | CLMN//KIF21B//AADAT//NCF1//FCHSD1//BTBD9//DLX3//TMC6//BUB3//ABCC10 |
tsrna-01896 | i-tRF | GluCTC | AGTGGTTAGGATTCGGCGCTCTCACCGCC | DDX60//CLSTN1//MRPS15//SEMA3B//AADAT//ABHD3//KRIT1//MYH7B//CFL1//ZNF510 |
tsrna-10930 | i-tRF | GluCTC | GTGGTTAGGATTCGGCGCTCTCACC | ZNF510//TBC1D17//LILRA4//SEMA3B//CCDC141//SBF1//PTCHD4//CIC//SLC25A19//ABHD3 |
tsrna-14300 | i-tRF | GluCTC | TCTAGTGGTTAGGATTCGGCGCTC | GNG11//KRIT1//NCF1//TBC1D31//CLMN//VPS26C//ABHD11//CGN//NPY4R//NPY4R2 |
tsrna-19142 | i-tRF | GluCTC | TAGTGGTTAGGATTCGGCGCTCTCACCGCC | DDX60//CLSTN1//AADAT//KRIT1//ABHD3//SEMA3B//ZNF510//CSNK2A1//MYH7B//OPA3 |
tRF-21 | i-tRF | GlyGCC | TAGAATTCTCGCCTGCCACGC | FCGR2A//ZNF668//CTBS//SOX11//IFI30//AC007192.1//LTB4R//PRSS55//RBCK1//C6orf223 |
tsrna-14173 | i-tRF | HisGTG | TCGTATAGTGGTTAGTACTCTGCGTTGTGGCCGCAGCAACCT | JAG2//WNT5B//PRMT5//PAK6//TBL1X//UMPS//KDM2A//EGR4//NDUFC1//AL021997.3 |
tsrna-15779 | i-tRF | LysCTT | GCTCAGTCGGTAGAGCATGGGACTCTT | MAPK14//EBI3//INHBE//BCL7C//NTNG2//IP6K2//MUC5B//CACNG7//LRRN3//FNDC1 |
i-tRF-Lys-TTT | i-tRF | LysTTT | N/A | N/A |
i-tRF-Met-CAT | i-tRF | MetCAT | N/A | N/A |
tsrna-21275 | i-tRF | MetCAT | GTGGCGCAGCGGAAGCGTGCTGGGC | SIRPB1//CELSR3//TMEM185B//MDGA2//ADAMTS17//HES1//AKAP7//ADGRA2//DNAJC2//TP53RK |
tsrna-07404 | i-tRF | PheGAA | ATGTTTAGACGGGCTCACAT | IPO9//CEP104//MED13L//PKHD1//IL10RB//AP000295.1//ZNF331//SENP6//TCEAL4//GAB4 |
tsrna-07409 | i-tRF | PheGAA | ATGTTTAGACGGGCTCACATCACCC | CHID1//BBX//CTU1//RSRC1//PRUNE2//ZBTB20//EMC1//LRRC20//RUFY3//RPS25 |
tsrna-09129 | i-tRF | PheGAA | AATGTTTAGACGGGCTCAC | MED13L//CEP104//PKHD1//SENP6//TM7SF3//IL10RB//AP000295.1//NCEH1//CNTNAP1//CYP4F3 |
tsrna-09136 | i-tRF | PheGAA | AATGTTTAGACGGGCTCACATCACCCC | CHID1//IPO9//ZBTB20//IL10RB//AP000295.1//CTU1//RSRC1//YAP1//OSBPL7//BBX |
tsrna-09139 | i-tRF | PheGAA | AATGTTTAGACGGGCTCACATCACCCCATAA | CHID1//IPO9//IL10RB//AP000295.1//ZBTB20//HADHB//YAP1//OSBPL7//ALG11//UTP14C |
tsrna-09141 | i-tRF | PheGAA | AATGTTTAGACGGGCTCACATCACCCCATAAACA | IPO9//HADHB//KCNQ2//IL10RB//AP000295.1//YAP1//OSBPL7//ALG11//UTP14C//UTP14A |
tsrna-12286 | i-tRF | PheGAA | GTTTAGACGGGCTCACATCACCCC | CHID1//ZBTB20//EMC1//CTU1//RSRC1//YAP1//LZTS2//IPO9//BBX//IL10RB |
tsrna-26246 | i-tRF | PheGAA | GAAAATGTTTAGACGGGCTCACATC | IPO9//POC1B//MED13L//SRGAP1//CCER1//PKHD1//IL10RB//AP000295.1//CNTNAP1//EREG |
i-tRF-Pro-AGG | i-tRF | ProAGG | N/A | N/A |
tsrna-26278 | i-tRF | SerGCT | GAAAGCTCACAAGAACTGCTAACTCATGCCCCCATG | MFGE8//ZBTB37//ZDHHC22//FAM126B//SPI1//C11orf24//POU4F1//PCDHAC1//SETD6//PPP1R37 |
tsrna-16151 | i-tRF | ValCAC | TTCCGTAGTGTAGCGGTTATCACATT | RPA1//PLEKHG5//FAM114A1//GPC1//DLL1//PLXNB3//OPLAH//MON1B//ASIC2//THUMPD1 |
tRF1-Arg-ACG | tRF-1 | ArgACG | N/A | N/A |
AS-tDR-009829 | tRF-1 | LeuAAG | N/A | N/A |
tRF1-Leu-AAG | tRF-1 | LeuAAG | N/A | N/A |
tRF1-Leu-TAG | tRF-1 | LeuTAG | N/A | N/A |
tRF1-Met-CAT | tRF-1 | MetCAT | N/A | N/A |
tRF1-Phe-GAA | tRF-1 | PheGAA | N/A | N/A |
S-tDR-007337 | tRF-1 | ProTGG | N/A | N/A |
tRF1-Ser-AGA | tRF-1 | SerAGA | N/A | N/A |
tRF1-VaI-TAC | tRF-1 | ValTAC | N/A | N/A |
AS-tDR-000098 | tRF-3 | AlaAGC | N/A | N/A |
AS-tDR-006247 | tRF-3 | AlaAGC | N/A | N/A |
AS-tDR-006895 | tRF-3 | AlaCGC | N/A | N/A |
tRF3-Arg-ACG | tRF-3 | ArgACG | N/A | N/A |
AS-tDR-006032 | tRF-3 | CysGCA | N/A | N/A |
tRF3-Cys-GCA | tRF-3 | CysGCA | N/A | N/A |
AS-tDR-000069 | tRF-3 | GlnCTG | N/A | N/A |
AS-tDR-006440 | tRF-3 | GlnCTG | N/A | N/A |
AS-tDR-007001 | tRF-3 | GlnCTG | N/A | N/A |
tsrna-06963 | tRF-3 | GlnCTG | ATCTCGGTGGAACCTCC | ST3GAL4//TOR3A//FNDC11//PRDM1//SEC61A2//SLC6A7//TP53BP2//TG//SYNE2//DCAKD |
tsrna-25233 | tRF-3 | GlnCTG | CTCGGTGGAACCTCCA | ST3GAL4//TOR3A//FNDC11//MYO1C//DCAKD//PRDM1//FNBP1//UBAC2//TRPV2//STAG2 |
AS-tDR-000071 | tRF-3 | GlnTTG | N/A | N/A |
AS-tDR-006051 | tRF-3 | GlnTTG | N/A | N/A |
tRF3-Gly-CCC | tRF-3 | GlyCCC | N/A | N/A |
tsrna-16124 | tRF-3 | GlyCCC | TTCCCGGGCGGCGCACCA | LGALS1//MC1R//IGHV5-51//IGHV5-10-1//KCTD1//HAAO//WDR55//CSNK1G2//SEMA5B//UBE2C |
tRF3-Gly-TCC | tRF-3 | GlyTCC | N/A | N/A |
AS-tDR-000064 | tRF-3 | LeuAAG | N/A | N/A |
AS-tDR-005996 | tRF-3 | LeuAAG | N/A | N/A |
AS-tDR-007240 | tRF-3 | LeuAAG | N/A | N/A |
AS-tDR-012559 | tRF-3 | LeuAAG | N/A | N/A |
tRF3-Leu-AAG | tRF-3 | LeuAAG | N/A | N/A |
AS-tDR-000082 | tRF-3 | LeuCAG | N/A | N/A |
AS-tDR-006198 | tRF-3 | LeuCAG | N/A | N/A |
tRF-Leu-CAG-002 | tRF-3 | LeuCAG | ATCCCACTCCTGACACCA | LRRC8E//PLN//C12orf45//HERC3//C6orf89//CHST10//EML1//TADA2A//DTWD1//FGF13 |
AS-tDR-000080 | tRF-3 | LeuTAG | N/A | N/A |
tsrna-03857 | tRF-3 | MetCAT | CCCCGAAAATGTTGGTTATACCCTTCCCGTACTACCA | HERC1//GABARAPL1//AC027796.3//C12orf65//CCDC85C//ZEB1//PARVG//CDKL5//SCYGR8//CHTOP |
tsrna-02481 | tRF-3 | PheGAA | CACTGAAAATGTTTAGACGGGCTCACATCACCCCATAAACACC | IPO9//ARHGEF37//PLOD3//RGS3//ELK1//PCGF3//IGLON5//NDUFA3//CNIH3//NSG1 |
tRF3-ser-AGA | tRF-3 | SerAGA | N/A | N/A |
tsrna-13738 | tRF-3 | SerTGA | TCGAACCCTGCTCGCTGCGCCA | RASGRP2//DAZL//ADRA2C//CLDN1//OPCML//AMDHD2//CNOT6//MEA1//CHAC2//ZACN |
tRF3-Thr-AGT | tRF-3 | ThrAGT | N/A | N/A |
tRF3-Thr-AGT | tRF-3 | ThrAGT | GGAGGCACCGCTGGGAT | SLC29A3//CTC1//ADGRG2//PCDHGA11//MAPK1//PCDHGA6//BRSK2//SRPRA//ACAD10//RRP7A |
tRF3-Thr-TGT | tRF-3 | ThrTGT | N/A | N/A |
tsrna-18478 | tRF-3 | ThrTGT | TTCAATTCTCGCTGGGGCCTCCA | CASP9//DOK1//JRK//ZNF189//KLC3//NOL6//ANKLE2//RASIP1//AC008764.4//SSUH2 |
tRF3-Tyr-GTA | tRF-3 | TyrGTA | N/A | N/A |
tsrna-25751 | tRF-3 | TyrGTA | CTGGTTCGAATCCGGCTCGAAGGACCA | C2orf72//CLK3//PAG1//KLHDC4//ANKMY1//EPHB4//PHACTR1//KCNJ11//HIST1H4H//SLC30A1 |
AS-tDR-005699 | tRF-3 | ValAAC | N/A | N/A |
AS-tDR-009340 | tRF-3 | ValAAC | N/A | N/A |
tRF3-Val-AAC | tRF-3 | ValAAC | N/A | N/A |
AS-tDR-006255 | tRF-3 | ValCAC | N/A | N/A |
AS-tDR-006548 | tRF-3 | ValTAC | N/A | N/A |
tsrna-04539 | tRF-3 | ValTAC | CCTGGGTTCGAGCCCCAGTGGAACCACCA | C9orf116//ACOT11//KBTBD4//MLLT6//TRIB3//SNX8//NFKB1//THEM6//NKIRAS2//TMEM266 |
tsrna-11835 | tRF-3 | ValTAC | GTTCGAGCCCCAGTGGAACCACCA | LIN7B//HLA-DPA1//ZSWIM4//GIMAP4//NTN4//FAM180A//RPS24//CLDN5//HYAL2//HES5 |
tsrna-18943 | tRF-5 | GlnTTG | TAGGATGGGGTGTGATAGGTG | NRXN2//IGF2BP1//TMEM222//PCNX1//GABRA6//CCN3//ADGRA1//CUX1//KIAA1958//SYT17 |
AS-tDR-000546 | tRF-5 | GluCTC | N/A | N/A |
tRF5-Glu-CTC | tRF-5 | GluCTC | N/A | N/A |
AS-tDR-000619 | tRF-5 | GluTTC | N/A | N/A |
tRF5-Glu-TTC | tRF-5 | GluTTC | N/A | N/A |
AS-tDR-000017 | tRF-5 | GlyCCC | N/A | N/A |
tRF5-Gly-CCC | tRF-5 | GlyCCC | N/A | N/A |
tsrna-14691 | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATT | FCGR2A//SORCS1//HSD17B4//MRPS5//SP3//POLR1A//TNS2//UBN1//DDI1//EIF3G |
tRF5-Leu-CAG | tRF-5 | LeuCAG | N/A | N/A |
tsrna-02509 | tRF-5 | LysTTT | CACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAG | MGAT3//CT55//WASL//AC106741.1//CNTNAP4//CSNK1D//HAND2//MSANTD1//XRCC4//TTC33 |
tsrna-02512 | tRF-5 | LysTTT | CACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAGATTAA | MGAT3//LARP1B//GPR61//WASL//CT55//IMPAD1//TMEM235//TMEM33//WDR72//MSANTD1 |
tsrna-02513 | tRF-5 | LysTTT | CACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAGATTAAG | IMPAD1//MGAT3//LARP1B//HPSE//GPR61//CT55//WASL//TMEM235//ZNF384//STMP1 |
tRF-Pro-AGG-004 | tRF-5 | ProAGG;ProCGG;ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGC | KCNJ4//NOMO3//NOMO2//STAB2//BLMH//PTPRU//ZSWIM8//D2HGDH//MAN1C1//PRDM7 |
tsrna-09704 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCAC | FNTB//CHURC1-FNTB//SENP8//SREBF2//STARD6//KCMF1//IGFN1//ZNF527//RGS8//CLASRP |
tsrna-12357 | tRF-5 | ValCAC | GTTTCCGTAGTGTAGCGGTTATCACATT | PLEKHG5//KLK10//MED31//ESPL1//GARS//MON1B//LDLRAD1//KIAA0040//GPC1//HS6ST3 |
tRF-Ala-CGC | N/A | AlaCGC | N/A | N/A |
tRFT-Cys-GCA | N/A | CysGCA | N/A | N/A |
tRF-Gln-CTG | N/A | GlnCTG | N/A | N/A |
tRF-Leu-AAG | N/A | LeuAAG | N/A | N/A |
tRF-Met-CAT | N/A | MetCAT | N/A | N/A |
tsRNA-MetCAT-37 | N/A | MetCAT | N/A | N/A |
tRF-Pro-CGG | N/A | ProCGG | GAAGCGAGAATCATACCCCTAGACCAACGAGCC | SRCAP//ANKRD52//TMEM200B//RCOR1//LRPAP1//SHC3//HECTD3//TRIM5//ZYG11A//KRT15 |
tsRNA-ThrTGT-23 | N/A | ThrTGT | N/A | N/A |
tiRNA-Val-CAC-2 | N/A | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
tsRNA-ValTAC-41 | N/A | ValTAC | N/A | N/A |
tRF-Pro-CGG | N/A | N/A | N/A | N/A |
tRF3‐Thr‐AGT | N/A | N/A | N/A | N/A |