The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tRF-20-S998LO9D | tRF-5 | ArgTCT | GTCTCTGTGGCGCAATGGAC | GABRB3//ACVR2B//ALDH7A1//HES7//FBH1//PXYLP1//EFCAB5//SEPTIN1//VSIG10L2//TBC1D5 |
| tRF-20-6S7P4PWJ | tRF-5 | IleAAT | GGCCGGTTAGCTCAGTCGGC | GRWD1//PODNL1//PREX1//SRSF8//TNN//DTD1//KIFC2//CILP//CELA3B//RPL15 |
| tRF-19-Q99P9PJZ | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGT | SLC16A7//FAHD2A//FNTB//CHURC1-FNTB//SENP8//CERCAM//RGS8//KCNK5//NKX2-3//TCP10 |
| tRF-21-I8W47W1R0 | i-tRF | GluTTC | ATTGGTCGTGGTTGTAGTCCG | KLK1//CACNG8//ACE2//AC097625.2//GALK1//PLXNB3//MMP2//MUC5B//ACAD9//ERGIC2 |
| tiRNA-Arg-CCG-001 | 5'-tiRNA | ArgCCG | GACCCAGTGGCCTAATGGATAAGGCATCAGCCTC | OAZ3//NSMF//HPSE//SMG9//TTC30A//TMCC1//CIZ1//NAT10//SHC3//SEC31B |
| tiRNA-Gln-CTG-003 | 5'-tiRNA | GlnCTG | GGTTCCATGGTGTAATGGTTAGCACTCTGGACTC | NEFL//SLC25A48//DISC1//WDR66//RPL41//TSNAX-DISC1//FAM92B//C10orf67//EIF4ENIF1//GCNA |
| tiRNA-His-GTG-001 | 5'-tiRNA | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTG | SHF//EVPLL//AC010422.3//MAN2B1//ZNF497//MFGE8//SHANK2//ARHGAP25//DDB1//SUSD5 |
| tiRNA-Lys-CTT-001 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCC | NFKBID//EBI3//RPS6KA2//JPH1//WDR54//MOB2//GULP1//SEC61A1//PES1//PLXNA1 |
| tiRNA-Lys-CTT-002 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTC | EBI3//NFKBID//CHTF18//JPH1//TNFRSF11A//PES1//MGAT1//POM121C//ALG14//STX18 |
| tiRNA-Lys-CTT-005 | 5'-tiRNA | LysCTT | GCCCAGCTAGCTCAGTCGGTAGAGCATGAGACTC | NFKBID//TNFRSF11A//EBI3//MGAT1//PES1//ALG14//JPH1//INTS6//KCNC4//TEX51 |
| tiRNA-Val-AAC-002 | 5'-tiRNA | ValAAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTA | ZBED2//CTNND2//CDYL2//SLC12A5//KIAA1549//HK2//CLSTN3//CELA2A//ACAP1//LRRN3 |
| tiRNA-Val-CAC-001 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
| tiRNA-Val-CAC-003 | 5'-tiRNA | ValCAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//CTNND2//SLC12A5//CDYL2//KIAA1549//STK36//CELA2A//ACAP1//CDC25C//HK2 |
| tiRNA-Val-TAC-003 | 5'-tiRNA | ValTAC | GGTTCCATAGTGTAGTGGTTATCACATCTGCTTT | CAMK1D//ZNF281//CYP4F3//TEDC1//ZC3H15//TMBIM6//FMNL3//ANK3//CD86//CYP4F2 |
| tRF-20-40KK5Y93 | i-tRF | ArgCCT | CTAAGCCAGGGATTGTGGGT | ARNT2//RAB37//RIMS3//ERGIC1//GMPPA//MYO1G//ACSS1//TCP11L1//C10orf82//FLNA |
| tRF-20-I8W47W1R | i-tRF | GluTTC | ATTGGTCGTGGTTGTAGTCC | KLK1//ACE2//AC097625.2//CACNG8//MMP2//MUC5B//ACAD9//GALK1//ZNF347//FUT11 |
| i-tRF-GlyGCC | i-tRF | GlyGCC | GAGGCCCGGGTTCGATTC | FCGR2A//ACSM2B//ACSM2A//ZBED8//PLEKHA8//PKMYT1//WDFY3//TOR2A//KCNK4//SMUG1 |
| tRF-30-7EMQ18Y3E7QN | i-tRF | HisGTG | GTGATCGTATAGTGGTTAGTACTCTGCGTT | SHF//ANO8//NLRP14//RBMXL1//EMC10//TRIO//EVPLL//ARHGAP25//MFGE8//UBE2L5 |
| tRF-1001 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTATTT | GOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8 |
| tRF-03357 | tRF-1 | N/A | N/A | N/A |
| tRF-Gln-CTG-034 | tRF-2 | GlnCTG | TGGACTCTGAATCC | FOLH1//REV1//GALNT5//BRD3//CNKSR3//SUN3//TESPA1//AL357075.5//PANK1//NBEA |
| tRF-His-GTG-019 | tRF-2 | HisGTG | CAGATTGTGAATCT | ABCA2//CCDC9B//ZFAND3//TRAPPC8//NCR2//SAR1B//CCDC158//SEC24D//ST6GALNAC3//CDKN3 |
| 3'tRF-CAT1 | tRF-3 | AlaAGC | TCCCCAGTACCTCCACCA | SEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G |
| tRF-18-8R1546D2 | tRF-3 | AlaAGC | TCCCCAGTACCTCCACCA | SEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G |
| tRF-Ala-AGC-002 | tRF-3 | AlaAGC | CCCCGGCACCTCCACCA | MEGF8//SEC14L1//RETREG3//RAB43//ISY1-RAB43//PLXNB1//FAM171A2//SMTN//RIC3//DCHS1 |
| tRF-Ala-AGC-010 | tRF-3 | AlaAGC | TCCCCGGCACCTCCACCA | SEC14L1//RAB43//ISY1-RAB43//FAM171A2//SMTN//RIC3//RETREG3//EGLN3//DCHS1//PLXNB1 |
| tRF-Cys-GCA-004 | tRF-3 | CysGCA | TCCGGGTGCCCCCTCCA | VSX2//MAN1A1//PDGFC//POLR2H//FAM181B//JAKMIP1//C4orf50//PDZRN3//TSPY2//CLIC6 |
| tRF-Gln-CTG-005 | tRF-3 | GlnCTG | TCTCGGTGGAACCTCCA | ST3GAL4//TOR3A//FNDC11//FNBP1//DCAKD//ORC1//CRTAP//SYNE2//FHAD1//TP53BP2 |
| tRF-Gln-TTG-013 | tRF-3 | GlnTTG | TCTCGGTGGGACCTCCA | TOR3A//SLC4A8//TMEM132A//ST3GAL4//PCDHGC4//DKKL1//TGFBR3L//SGSM2//DMBT1//COL11A1 |
| tRF-22-WB8US5652 | tRF-3 | HisGTG | TCGAATCCGAGTCACGGCACCA | CALB1//ERVFRD-1//MED20//MKRN2//STK11//HSD17B6//PRDM11//TMEM263//NYAP2//P3H3 |
| AS-tDR-006001 | tRF-3 | LeuCAG | ATCCCACTCCTGACACC | LRRC8E//PLN//FGF13//BLOC1S1//RASGRP4//HERC3//C12orf45//CHST10//TADA2A//TPCN2 |
| tRF-Leu-CAG-002 | tRF-3 | LeuCAG | ATCCCACTCCTGACACCA | LRRC8E//PLN//C12orf45//HERC3//C6orf89//CHST10//EML1//TADA2A//DTWD1//FGF13 |
| tRF-Lys-TTT-012 | tRF-3 | LysTTT | AACACCTCTTTACAGTGACCA | KLK13//MTHFR//ITPRIPL1//TSPAN14//TNFAIP3//KNOP1//COPZ1//IQGAP2//EIF2B4//MOB3C |
| tRF-Lys-TTT-014 | tRF-3 | LysTTT | ACACCTCTTTACAGTGACCA | KLK13//TSPAN14//KNOP1//COPZ1//IQGAP2//EIF2B4//MOB3C//NAV3//EPPIN//UBXN2B |
| tRF-Lys-TTT-016 | tRF-3 | LysTTT | ACCTCTTTACAGTGACCA | TSPAN14//MTHFR//NAV3//EIF2B4//STOML1//PREP//CIC//POLE//GCN1//AMH |
| tRF-Lys-TTT-022 | tRF-3 | LysTTT | CACCTCTTTACAGTGACCA | TSPAN14//MTHFR//EIF2B4//KNOP1//NAV3//MOB3C//KLK13//IQGAP2//COPZ1//UBXN2B |
| tRF-Lys-TTT-029 | tRF-3 | LysTTT | CCTCTTTACAGTGACCA | MTHFR//NAV3//EIF2B4//PREP//CIC//STOML1//POLE//GCN1//COL12A1//AMH |
| tRF-Phe-GAA-001 | tRF-3 | PheGAA | TATATACCCGGGTTTCGGCACCA | NFATC3//NFE4//PKN3//LRP10//CSMD2//PHF20//TUBA4A//HAGHL//TNFSF12-TNFSF13//TNFSF13 |
| tRF-Ser-GCT-035 | tRF-3 | SerGCT | TAACAACATGGCTTTCTCACCA | S100A7L2//SNX25//DYNC1LI2//SGSM3//TSEN2//TENT5A//AL022238.4//PALD1//SGK1//DCDC1 |
| tRF-Val-AAC-003 | tRF-3 | ValAAC | ACCGGGCGGAAACACCA | STK32A//LTBP3//ITGB3BP//CDYL//SH3BP5L//DNAJC5//LPO//LYPLA1//HNRNPH1//TPD52L2 |
| 3'U-tRFValCAC | tRF-3 | ValCAC | N/A | N/A |
| tRF-25-8DYDZDL9X1 | tRF-3 | ValTAC | TCAACTTAACTTGACCGCTCTGACC | ZBED9//MAP4//FXYD6//ST3GAL3//AL451062.3//DDR1//EML2//KCNA7//KCNK6//SETD7 |
| tRF-Val-TAC-023 | tRF-3 | ValTAC | AACTTACACTTAGG | KIF18A//AFG1L//FAM53C//TRANK1//SERPINB8//RNF144B//C21orf58//CRTC1//UBE2D2//OOSP4A |
| tRF-Arg-TCT-008 | tRF-5 | ArgTCT | GGCTCCGTGGCGCAATGGATAGCGCATTGG | HES7//TULP4//OR10J1//SLC25A29//DENND2A//DBNDD1//HIP1R//ADAMTS5//TRPT1//SLC25A18 |
| tRF-Gln-CTG-003 | tRF-5 | GlnCTG | GGTTCCATGGTGTAATGGTTAGCACTCTGG | NEFL//RASSF8//PDGFRB//FAM92B//NOP16//ATP13A2//TEX37//C10orf67//C19orf85//EIF4ENIF1 |
| tRF-30-RRJ89O9NF5W8 | tRF-5 | GlnTTG | GGTCCCATGGTGTAATGGTTAGCACTCTGG | NEFL//PDGFRB//C19orf85//TEC//HAAO//FAM53B//AC068896.1//NEK10//RASSF8//UBE2J1 |
| tRF5-Glu | tRF-5 | GluCTC | N/A | N/A |
| tRNA-Glu-CTC | tRF-5 | GluCTC | N/A | N/A |
| tRF-30-86V8WPMN1E8Y | tRF-5 | GluTTC | TCCCATATGGTCTAGCGGTTAGGATTCCTG | PPP1R26//CYB561A3//CLEC18A//CLEC18C//CLEC18B//SGMS2//ZNF654//COLGALT1//NAALADL1//EPHB6 |
| AS-tDR-007303 | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTT | FCGR2A//SORCS1//HSD17B4//MRPS5//SP3//TNS2//DDI1//CDCP2//AL357673.1//UBN1 |
| tRF-28-P4R8YP9LOND5 | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTC | FCGR2A//SORCS1//HSD17B4//POLR1A//MRPS5//SP3//PPARGC1B//TNS2//DDI1//CDCP2 |
| tRF-Gly-TCC-012 | tRF-5 | GlyTCC | GCGTTGGTGGTATAGTGGTTAGCATAGC | PHGDH//SLC6A4//LRP1//OTOG//WNK4//ZBED3//CSMD2//C3//B3GALT5//ITPR1 |
| tRF-23-XSXMSL730H | tRF-5 | HisGTG | TGCCGTGATCGTATAGTGGTTAG | SHF//SFTA3//PLD1//SUSD5//SLCO2B1//CARS//HMBOX1//FKTN//CHST9//LAMA2 |
| tRF-24-FSXMSL732Z | tRF-5 | HisGTG | AGCCGTGATCGTATAGTGGTTAGT | SHF//MUC5B//SFTA3//RGS21//CARS//DUSP10//LAMA2//FKTN//SUSD5//SLC22A23 |
| tRF-24-XSXMSL732Z | tRF-5 | HisGTG | TGCCGTGATCGTATAGTGGTTAGT | SHF//MUC5B//SFTA3//FKTN//SUSD5//PLD1//SLC22A23//CARS//DUSP10//RGS21 |
| tRF-30-PW5SVP9N15WV | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGC | SHF//OTUB2//ARHGAP25//SUSD5//EVPLL//LHFPL6//RBMXL2//SEMA4G//SFTA3//TEP1 |
| tRF-His-GTG-009 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGT | SHF//EVPLL//ARHGAP25//SHANK2//DDB1//SUSD5//RBMXL2//FOXC1//OTUB2//AC010422.3 |
| tRF-Leu-AAG-002 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAG | MRPS2//SLC39A8//PTBP1//TP73//DIP2B//HAPLN2//TRIL//RNF139//RUNX1//TM9SF1 |
| tRF-Leu-AAG-003 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAGC | TP73//MRPS2//RUNX1//SLC39A8//ZMYM2//PTBP1//FBXL22//CDT1//HEXA//TRIL |
| tRF-Leu-AAG-004 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAGT | MRPS2//TP73//SLC39A8//RUNX1//PTBP1//TRIL//MRPS26//ZMYM2//GPT//RNF139 |
| tRF-24-RPM830MM2S | tRF-5 | LeuAAG;LeuTAG | GGTAGCGTGGCCGAGCGGTCTAAG | LTB//MROH1//TRAPPC9//CRIP1//HMGCS1//PIEZO1//TRMT12//AC019117.3//AHR//SMIM6 |
| tRF-Leu-TAG-002 | tRF-5 | LeuTAG | GGTAGTGTGGCCGAGC | TP73//SORBS1//RUNX1//APOBEC3D//AL022318.4//MARCH4//MRPS2//AATK//SLC39A8//EDIL3 |
| tRF-Pro-AGG-004 | tRF-5 | ProAGG;ProCGG;ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGC | KCNJ4//NOMO3//NOMO2//STAB2//BLMH//PTPRU//ZSWIM8//D2HGDH//MAN1C1//PRDM7 |
| tRF-SeC-TCA-001 | tRF-5 | SecTCA | GCCCGGATGATCCTC | PPP1R3B//GLE1//ARMCX1//VSIG10L//DIPK1B//MAP2K7//RPS29//PAX5//TENM4//HERPUD1 |
| tRF-18-S3M83004 | tRF-5 | SerAGA;SerTGA | GTAGTCGTGGCCGAGTGG | PLEKHH3//ADAT3//TMEM79//SOX1//SLC24A4//CLDN5//ARID5B//ERCC3//CREB3L1//ESPNL |
| tRF-Tyr-GTA-131 | tRF-5 | TyrGTA | GGTAAAATGGCTGAGTGAAGCATTGGACTGTA | BACH1//ATXN2//TK2//LLGL1//PTGFR//NPAS3//BAIAP2L1//LRRK1//ACTG2//DCAF8 |
| tRNA-Glu-CTC | tRF-5 | N/A | N/A | N/A |
| TRF396 | N/A | AlaAGC | GGGGGTATAGCTCAGCGGT | LRRC8C//LRAT//AC093423.3//EPOR//HSPG2//PPIP5K2//LATS2//PRSS8//PRR23C//LZTS2 |
| tiRNA-5030GlnTTG-3 | N/A | GlnTTG | N/A | N/A |
| tRF-+1:T23-chrM.Glu-TTC | N/A | GluTTC | N/A | N/A |
| tRF-1:32-Gly-GCC-1 | N/A | GlyGCC | N/A | N/A |
| TRF320 | N/A | HisGTG | TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG | TFCP2L1//SLC25A48//SLC25A6//EME2//NPY4R//NPY4R2//TAS1R3//CLEC14A//HIVEP3//MIA |
| tRF-Leu-AAG-001 | N/A | LeuAAG | N/A | N/A |
| tRF-Leu-AAG-001 | N/A | LeuAAG | ATCCCACCGCTGCCACCA | ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB |
| TRF308 | N/A | LysCTT | GCCCGACTACCTCAGTCGG | LIX1L//ELFN1//PIK3CA//GUCA1B//ANKRD27//GBA//VARS2//HOMER3//EHBP1L1//MARC1 |
| tRF-1001 | N/A | N/A | N/A | N/A |
| tRF-T11 | N/A | N/A | N/A | N/A |
| TRF308 | N/A | N/A | N/A | N/A |
| TRF320 | N/A | N/A | N/A | N/A |
| TRF396 | N/A | N/A | N/A | N/A |