Associated tsRNAs in Myelodysplastic Syndromes

tsRNA_NametsRNA_TypeAnticodonSequenceTarget_Gene
tRF-20-S998LO9DtRF-5ArgTCTGTCTCTGTGGCGCAATGGACGABRB3//ACVR2B//ALDH7A1//HES7//FBH1//PXYLP1//EFCAB5//SEPTIN1//VSIG10L2//TBC1D5
tRF-21-I8W47W1R0i-tRFGluTTCATTGGTCGTGGTTGTAGTCCGKLK1//CACNG8//ACE2//AC097625.2//GALK1//PLXNB3//MMP2//MUC5B//ACAD9//ERGIC2
tRF-28-OB1690PQR304tRF-5SerTGAGAAAAAGTCATGGAGGCCATGGGGTTGGSTRN4//PGLYRP2//NCOR2//SSTR1//OMP//CCHCR1//ERGIC1//ANKRD54//AGBL5//ZNF592
tRF-32-RK9P4P9L5HMVQ5'-tiRNAAlaAGC;AlaCGCGGGGGTGTAGCTCAGTGGTAGAGCGCGTGCTTUBA52//CCDC141//TRRAP//NPHP4//LKAAEAR1//YEATS2//AMOTL1//NISCH//MASP2//TPM1
tRF-32-R29P4P9L5HJVQ5'-tiRNAAlaAGC;AlaCGC;AlaTGCGGGGATGTAGCTCAGTGGTAGAGCGCATGCTTSSUH2//PLCD4//AGPAT3//CYP4F22//SNX14//EPHB4//ABCA3//CABP1//CCDC141//EBF3
tRF-32-Q1Q89P9L8422Q5'-tiRNAGlyCCCGCGCCGCTGGTGTAGTGGTATCATGCAAGATTPTPRK//ESPN//PIGA//SSH1//FKBP1A//TMEM207//CLPTM1//ZNF467//MYL3//FAM120A
tRF-30-PNR8YP9LON4V5'-tiRNAGlyGCCGCATTGGTGGTTCAGTGGTAGAATTCTCGCFCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1
tRF-33-P4R8YP9LON4VDP5'-tiRNAGlyGCCGCATGGGTGGTTCAGTGGTAGAATTCTCGCCTGFCGR2A//B4GALNT4//ZNF513//CNTLN//TGIF2LX//TGIF2LY//DPF1//LPAR1//AATK//F2RL2
tRF-33-6SXMSL73VL4YDN5'-tiRNAHisGTGGGCCGTGATCGTATAGTGGTTAGTACTCTGCGTSHF//RBMXL2//TMEM237//DDB1//NFRKB//LUZP1//PKD2L1//ADPRHL1//PIM3//CARD10
tRF-34-PW5SVP9N15WV2P5'-tiRNAHisGTGGCCGTGATCGTATAGTGGTTAGTACTCTGCGTTGSHF//EVPLL//AC010422.3//MAN2B1//ZNF497//MFGE8//SHANK2//ARHGAP25//DDB1//SUSD5
tRF-35-PSQP4PW3FJI0E75'-tiRNALysCTTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTEBI3//RPS6KA2//CHTF18//NFKBID//MGAT1//TNFRSF11A//KIF25//JPH1//ALG14//ETFBKMT
tRF-32-Q99P9P9NH57SJ5'-tiRNAValCACGCTTCTGTAGTGTAGTGGTTATCACGTTCGCCSREBF2//ZBED2//PTPN14//ERAP1//CLASRP//NPTXR//CASZ1//HK2//YAF2//PELP1
tRF-33-Q99P9P9NH57SD35'-tiRNAValCACGCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTZBED2//ERAP1//NPTXR//CLASRP//OBSCN//HK2//NR1H3//HJURP//AGRN//EPB41L3
tRF-32-R9JP9P9NH5SY35'-tiRNAValTACGGTTCCATAGTGTAGTGGTTATCACGTCTGCTCAMK1D//ZNF281//SCAF1//TEDC1//TMBIM6//CYP4F3//SLC35B2//ZNF30//HPS3//RPA1
tRF-19-UJJKIWIZi-tRFArgCCTTAAGCCAGGGATTGTGGGTARNT2//RIMS3//ERGIC1//GMPPA//MYO1G//ACSS1//C10orf82//TCP11L1//RBPJL//RAB37
tRF-21-4E8BR9M3Ei-tRFArgTCTCTAATTCAAAGGTTCCGGGTTNKD1//UBASH3A//SH3TC1//SLC2A14//SLC2A3//FAN1//SUPT6H//C12orf56//MROH2A//NEIL2
tRF-26-MI7O3B1NR8Ei-tRFAsnGTTCGGCTGTTAACCGAAAGGTTGGTGGTPI4KB//SKOR2//PDE4DIP//KPNA6//ESPN//TRPM7//PTPRD//KIF13B//IFIT3//GFAP
tRF-27-WJ9X0UD394Ni-tRFAsnGTTTCGGCTGTTAACCGAAAGGTTGGTGGTPI4KB//SKOR2//PTPRD//PDE4DIP//JAG1//IFIT3//KPNA6//ESPN//CACNG8//TRPM7
tRF-30-QKF1R3WE8RO8i-tRFAspGTCGCGGGAGACCGGGGTTCGATTCCCCGACGGFBXL14//MTCL1//CFB//AL645922.1//SYNJ2//RAB3B//CNOT8//BOC//SH3BP2//TMEM59L
tRF-31-QKF1R3WE8RO80i-tRFAspGTCGCGGGAGACCGGGGTTCGATTCCCCGACGGGFBXL14//LRRC37B//SYNJ2//TMEM59L//INPP5E//EGLN2//CNOT8//RAB3B//SH3D21//FAM47B
tRF-32-L85DMKYUYRLH4i-tRFAspGTCCGCGGGAGACCGGGGTTCGATTCCCCGACGGGFBXL14//INPP5E//LRRC37B//SYNJ2//TMEM59L//EGLN2//CACNA1C//RASSF3//GRIK5//CNOT8
tRF-33-EH623K7SIR3DDYi-tRFAspGTCACGCGGGAGACCGGGGTTCGATTCCCCGACGGGFBXL14//INPP5E//GRIK5//LRRC37B//CACNA1C//ATXN1//SYNJ2//TMEM59L//EGLN2//SH3D21
tRF-34-EH623K7SIR3DIYi-tRFAspGTCACGCGGGAGACCGGGGTTCGATTCCCCGACGGGGINPP5E//MTCL1//GRIK5//SH3D21//CACNA1C//LRRC37B//FBXL14//FAM47B//NDST1//TMEM59L
tRF-34-QKF1R3WE8RO8ISi-tRFAspGTCGCGGGAGACCGGGGTTCGATTCCCCGACGGGGAGMTCL1//INPP5E//FAM47B//RNF44//LRRC37B//LYPD3//FGF13//SH3D21//GUCY2D//CNOT8
tRF-35-EH623K7SIR3DR2i-tRFAspGTCACGCGGGAGACCGGGGTTCGATTCCCCGACGGGGAINPP5E//MTCL1//GRIK5//FAM47B//CACNA1C//LRRC37B//SH3D21//NDST1//FBXL14//ATXN1
tRF-21-WP9N1EWJ0i-tRFGluCTCTCTAGTGGTTAGGATTCGGCGCAT//PRSS53//TBC1D31//NPY4R//NPY4R2//CLMN//KIF21B//C3orf52//NRXN2//HNRNPH3
tRF-25-7343RX6NMHi-tRFGluCTCGTGGTCTAGTGGTTAGGATTCGGCGNPY4R//NPY4R2//KIF21B//ABHD11//CTNNBL1//IKZF2//CASZ1//WNT5B//RCOR2//FAM174A
tRF-27-7343RX6NMH3i-tRFGluCTCGTGGTCTAGTGGTTAGGATTCGGCGCTABHD11//NPY4R//NPY4R2//KIF21B//HSD17B14//KCNH6//DDX60//RHBDF2//CGN//RCAN3
tRF-28-N3R718YKISD8i-tRFGluCTCCTGGTGGTCTAGTGGTTAGGATTCGGCGNPY4R//NPY4R2//TFCP2L1//KLK11//COTL1//SMARCA4//RCOR2//DDX60//ANO9//PALLD
tRF-29-389MV47P59I8i-tRFGluCTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGTFCP2L1//NPY4R//NPY4R2//KLK11//PALLD//SLC25A48//GALNTL6//ESPL1//TAS1R3//ZFP36
tRF-29-N3R718YKISIMi-tRFGluCTCCTGGTGGTCTAGTGGTTAGGATTCGGCGCDDX60//TFCP2L1//KLK11//CGN//HTR1E//COTL1//KCNH6//ANO9//SLC37A1//ABHD11
tRF-16-I8W47WBi-tRFGluTTCATTGGTCGTGGTTGTAADAMTSL2//ZFHX4//ING1//CHRNA10//PPFIA3//ACAD9//ACE2//AC097625.2//SLC39A9//GPCPD1
tRF-20-I8W47W1Ri-tRFGluTTCATTGGTCGTGGTTGTAGTCCKLK1//ACE2//AC097625.2//CACNG8//MMP2//MUC5B//ACAD9//GALK1//ZNF347//FUT11
tRF-29-3IRW18V6XOIEi-tRFGlyCCCCCGCTGGTGTAGTGGTATCATGCAAGATTSSH1//SHANK3//ARHGAP32//PRKD1//NINJ1//AL136531.2//FKBP1A//PIGA//TP53//MOB2
tRF-31-LSN3S3RQJVDEEi-tRFGlyCCCCGCCGCTGGTGTAGTGGTATCATGCAAGATTFKBP1A//CLPTM1//MYL3//ST6GALNAC6//AL157935.2//TRARG1//ZSWIM6//GDF5//ANXA8L1//NINJ1
tRF-17-VBY9PYJi-tRFGlyGCCTAGAATTCTCGCCTGCCFCGR2A//CTBS//ZNF668//CENPB//SOX11//TMEM132B//NRP2//TRARG1//IQSEC2//IFI30
tRF-18-JMRPFQDYi-tRFLysCTTCAGTCGGTAGAGCATGGGSLC6A9//PXDN//TSPAN11//PDE6B//FNDC1//NPHP4//ADH1B//NMT1//ADH1C//ADH1A
tRF-30-K84J83ML5FX2i-tRFLysCTTCCCGGCTAGCTCAGTCGGTAGAGCATGAGACFAP410//ALG14//COMMD2//PAFAH1B1//RPS6KA2//INTS6//CYB561A3//BHLHB9//ARMCX5-GPRASP2//EXOSC6
tRF-18-JHOJ7IDYi-tRFMetCAT;ThrCGTCAGCGGAAGCGTGCTGGGFZD10//TFF3//CISH//EXD2//HOXA1//IDE//ASIC2//MEGF6//SIRPB1//MPP2
tRF-18-MBQ4NKDJi-tRFMetCAT;ThrCGTCGGAAGCGTGCTGGGCCCTBC1D5//PAFAH1B1//NRDE2//PTAFR//MAD2L2//CCL14//ASIC2//GTF3C4//APTX//ALG13
tRF-16-Q622EVEi-tRFSerGCTGCTCACAAGAACTGCTZNF540//MTMR3//SYNPO//SYNPO2//MAML3//GOLGA1//ZBTB40//ZNF248//PTPRZ1//ZCCHC2
ts-47tRF-1ArgTCGAAGGGAGGTTATGATTAACTTTADAMTS12//HNRNPU//CTDSP2//ABCA4//DTNA//DGAT2L6//SLC25A1//KLHL7//CYYR1//AFAP1L1
ts-46tRF-1HisGTGTTGTGGAAACAATGGTACGGCAAGGGCCTCTTTENAM//PREX1//ARV1//C17orf53//GAS2L1//VPS18//MVP//MDN1//TF//PORCN
ts-101tRF-1SerGCTGCTAAGGAAGTCCTGTGCTCAGTTTLAIR2//AC013394.1//CHD2//TPP1//NAV2//ARAP1//CIDEC//C6orf89//SPACA9//SLC25A36
tRF-1001tRF-1SerTGAGAAGCGGGTGCTCTTATTTGOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8
ts-53tRF-1ThrAGTGCCTCCGTGTTTCCCCCACGCTTTTGCCASAMD12//HIPK2//NHLH2//C16orf71//SPOPL//FBXW4//FAM98C//CYP26B1//ZNF771//CAMK1D
3'tRF-CAT1tRF-3AlaAGCTCCCCAGTACCTCCACCASEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G
tRF-18-8R1546D2tRF-3AlaAGCTCCCCAGTACCTCCACCASEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G
tRF-34-M2OSRNLNKSEKH9tRF-3AspGTCCGGGAGACCGGGGTTCGATTCCCCGACGGGGAGCFAM47B//LYPD3//MTCL1//PDP1//FGFR1//ATXN1//ZNF318//SH3D21//SLC6A2//WNT2
tRF-22-WB8US5652tRF-3HisGTGTCGAATCCGAGTCACGGCACCACALB1//ERVFRD-1//MED20//MKRN2//STK11//HSD17B6//PRDM11//TMEM263//NYAP2//P3H3
tRF-17-88481D2tRF-3TyrGTATCCGGCTCGGAGGACCASTMN3//CCDC106//C8orf58//EPN2//CLK3//NMRAL1//RNF32//OSCAR//ADAMTS10//PSTPIP1
tRF-25-8DYDZDL9X1tRF-3ValTACTCAACTTAACTTGACCGCTCTGACCZBED9//MAP4//FXYD6//ST3GAL3//AL451062.3//DDR1//EML2//KCNA7//KCNK6//SETD7
tRF-26-YONONU3INDDtRF-3ValTACTTCAACTTAACTTGACCGCTCTGACCZBED9//FXYD6//MAP4//KCNK6//ST3GAL3//AL451062.3//POLE//PPM1F//SP100//DDR1
tRF-24-RKIP4OI3EStRF-5AlaAGCGGGGGATTAGCTCAAATGGTAGAGPLAGL2//THOC5//WDR34//NCR3LG1//MED22//TUSC2//AC099489.1//RAB25//PIP5K1C//SOD3
tRF-23-R29P4P9LDStRF-5AlaAGC;AlaCGC;AlaTGCGGGGATGTAGCTCAGTGGTAGAGGPR84//ITPR3//SGSM2//ZBTB7B//LRRC15//CHRM4//ALDH9A1//NACC1//AUTS2//PAQR5
tRF-21-RK9P4P9L0tRF-5AlaAGC;AlaCGC;AlaTGC;CysGCA;ValAACGGGGGTGTAGCTCAGTGGTAGHGS//SGSM2//GPR84//MYOCD//PHF12//PLK3//NACC1//MROH6//XKR8//THOC5
tRF-23-RK9P4P9LDStRF-5AlaAGC;AlaCGC;AlaTGC;CysGCA;ValAACGGGGGTGTAGCTCAGTGGTAGAGGPR84//RPAP1//PLK3//ITPR3//FAM189B//MYOCD//LRRC15//AUTS2//WNT3A//ZFHX2
tRF-30-RRJ89O9NF5W8tRF-5GlnTTGGGTCCCATGGTGTAATGGTTAGCACTCTGGNEFL//PDGFRB//C19orf85//TEC//HAAO//FAM53B//AC068896.1//NEK10//RASSF8//UBE2J1
tRF-27-87R8WP9N1E5tRF-5GluCTCTCCCTGGTGGTCTAGTGGTTAGGATTCTFCP2L1//CHRNA1//SLC25A48//TUBA1B//PDE12//ARMCX4//EME2//MYOZ1//EHMT1//COX6A1
tRF-31-87R8WP9N1EWJ0tRF-5GluCTCTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGTFCP2L1//SLC25A48//SLC25A6//EME2//NPY4R//NPY4R2//TAS1R3//CLEC14A//HIVEP3//MIA
tRF-26-86J8WPMN1EEtRF-5GluTTCTCCCACATGGTCTAGCGGTTAGGATTCOLGALT1//PPP1R26//SLC5A11//THUMPD3//TMEM69//DDX54//FYN//SMARCA2//EZH1//DDR1
tRF-28-86J8WPMN1E0JtRF-5GluTTCTCCCACATGGTCTAGCGGTTAGGATTCCPPP1R26//COLGALT1//ZNF654//SGMS2//SLC5A11//THUMPD3//MMP25//UTP4//CLEC18A//CLEC18B
tRF-31-87R8WP9I1EWJ0tRF-5GluTTCTCCCTGGTGGTCTAGTGGCTAGGATTCGGCGSLC25A6//ESPL1//TFCP2L1//GALNT11//CLEC14A//NPY4R//NPY4R2//MYOZ1//UBE2J2//TRIM6-TRIM34
tRF-30-PNR8YP9LON4VtRF-5GlyCCC;GlyGCCGCATTGGTGGTTCAGTGGTAGAATTCTCGCFCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1
tRF-28-P4R8YP9LOND5tRF-5GlyGCCGCATGGGTGGTTCAGTGGTAGAATTCTCFCGR2A//SORCS1//HSD17B4//POLR1A//MRPS5//SP3//PPARGC1B//TNS2//DDI1//CDCP2
tRF-30-PW5SVP9N15WVtRF-5HisGTGGCCGTGATCGTATAGTGGTTAGTACTCTGCSHF//OTUB2//ARHGAP25//SUSD5//EVPLL//LHFPL6//RBMXL2//SEMA4G//SFTA3//TEP1
tRF-31-6SXMSL73VL4YDtRF-5HisGTGGGCCGTGATCGTATAGTGGTTAGTACTCTGCSHF//RBMXL2//LUZP1//OR13J1//SWSAP1//OTUB2//AGAP2//DDB1//ARHGAP25//TMEM237
tRF-31-PW5SVP9N15WV0tRF-5HisGTGGCCGTGATCGTATAGTGGTTAGTACTCTGCGSHF//ARHGAP25//EVPLL//SUSD5//OTUB2//RBMXL2//LHFPL6//FOXC1//PTPRN//ELK4
tRF-24-RPM830MM2StRF-5LeuAAG;LeuTAGGGTAGCGTGGCCGAGCGGTCTAAGLTB//MROH1//TRAPPC9//CRIP1//HMGCS1//PIEZO1//TRMT12//AC019117.3//AHR//SMIM6
tRF-16-PSQP4PEtRF-5LysCTTGCCCGGCTAGCTCAGTSIAH3//PRR14L//PANK4//LMOD1//RHOD//ARID1B//EBI3//MYO15A//PTDSS1//TTYH1
tRF-28-PSQP4PW3FJD0tRF-5LysCTTGCCCGGCTAGCTCAGTCGGTAGAGCATGEBI3//RPS6KA2//RPS6KA1//RHOD//PIK3CD//ACAN//FBXL12//PRPF40B//B3GNT4//NMT1
tRF-29-PSQP4PW3FJFLtRF-5LysCTTGCCCGGCTAGCTCAGTCGGTAGAGCATGARPS6KA2//EBI3//RHOD//PIK3CD//RPS6KA1//ACAN//LGR6//GPER1//FBXL12//PRPF40B
tRF-30-PSQP4PW3FJI0tRF-5LysCTTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGRPS6KA2//POM121C//POMZP3//PES1//CFAP410//RHOD//RPS6KA1//PIK3CD//LGR6//DDR1
tRF-24-PS5P4PW3EStRF-5LysTTTGCCCGGATAGCTCAGTCGGTAGAGVSIG10L//TSR3//RNF157//PPIB//SRPK3//PLXNB3//ST8SIA6//DNA2//ADCY3//SYT5
tRF-25-PS5P4PW3FJtRF-5LysTTTGCCCGGATAGCTCAGTCGGTAGAGCEBI3//RPS6KA1//VSIG10L//GASK1A//ARHGEF19//PPIB//GLG1//SRPK3//PLXNB3//ST8SIA6
tRF-18-S3M83004tRF-5SerAGA;SerTGAGTAGTCGTGGCCGAGTGGPLEKHH3//ADAT3//TMEM79//SOX1//SLC24A4//CLDN5//ARID5B//ERCC3//CREB3L1//ESPNL
tRF-24-S3M8309N0YtRF-5SerAGA;SerTGAGTAGTCGTGGCCGAGTGGTTAAGGPLEKHH3//ADAT3//DCBLD1//ARHGEF2//PRKCQ//L3HYPDH//IGSF9B//PSD//SUV39H1//GSC
tRF-24-OUR8309N0YtRF-5SerGCTGACGAGGTGGCCGAGTGGTTAAGGFADS2//ESPN//ARHGAP23//CAPN13//BBC3//PTGER1//TPCN2//ANPEP//MCOLN2//TTC7B
tRF-31-79MP9P9NH57SDtRF-5ValAAC;ValCACGTTTCCGTAGTGTAGTGGTTATCACGTTCGCSLC12A5//CTNND2//CLSTN3//TNFRSF10B//CLPB//SREBF2//RABGAP1//OPLAH//FAM171A1//NLRC5
tRF-31-R9JP9P9NH5SYDtRF-5ValTACGGTTCCATAGTGTAGTGGTTATCACGTCTGCNEFL//CAMK1D//ZNF281//ZNF30//SCAF1//ANK3//LRRC8E//SLC26A2//FKBP5//CCDC200
tRNA-alatRF-5N/AN/AN/A
tRNA-cystRF-5N/AN/AN/A
tRNA-valtRF-5N/AN/AN/A
tiRNA-Gln-TTG-001N/AGlnTTGN/AN/A
tRF-1001N/AN/AN/AN/A
tRF-31-79MP9P9NH57SDN/AN/AGTTTCCGTAGTGTAGTGGTTATCACGTTCGCSLC12A5//CTNND2//CLSTN3//TNFRSF10B//CLPB//SREBF2//RABGAP1//OPLAH//FAM171A1//NLRC5
tRF-31-87R8WP9N1EWJ0N/AN/ATCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTFCP2L1//EME2//SLC25A48//TMEM92//RFTN1//SLC25A6//PAQR4//CCDC159//PDE12//ALKBH2
tRF-33-P4R8YP9LON4VDPN/AN/AGCATGGGTGGTTCAGTGGTAGAATTCTCGCCTGFCGR2A//B4GALNT4//ZNF513//CNTLN//TGIF2LX//TGIF2LY//DPF1//LPAR1//AATK//F2RL2