tsRNADisease

Associated tsRNAs in Multiple Sclerosis

tsRNA_Name	tsRNA_Type	Anticodon	Sequence	Target_Gene
tRF5-GluCTC	5'-tiRNA	GluCTC	TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT	TFCP2L1//EME2//RFTN1//TMEM92//PAQR4//CCDC159//SLC25A48//SLC25A6//TMEM69//CHRNB4
tiRNA-Glu-TTC-003	5'-tiRNA	GluTTC	TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGCTT	PAQR4//TMEM69//RFTN1//BAHCC1//DDX60//TFCP2L1//PHETA1//CHRNB4//SLC25A6//EME2
tiRNA-iMet-CAT-001	5'-tiRNA	iMetCAT	AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCC	TBC1D5//SIRPB1//IFIH1//SRPX//LHX6//ZNF579//SETD4//SRRM2//ZFAND3//CCL14
tiRNA-Val-AAC-002	5'-tiRNA	ValAAC	GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTA	ZBED2//CTNND2//CDYL2//SLC12A5//KIAA1549//HK2//CLSTN3//CELA2A//ACAP1//LRRN3
tiRNA-Gly-GCC-002_n1	i-tRF	GlyGCC	ATCGCATTGGTGGTTCAGTG	FCGR2A//ERAS//ZNF526//ADAR//RWDD1//PRDM15//RC3H2//COMMD3//TBC1D2B//PTGER4
AS-tDR-005058	i-tRF	SerGCT	CTTTGCACGCGTGGGT	WFS1//TLNRD1//RAB1A//PPP4R3C//LFNG//TCF7L2//RIN1//GPT//SEMA5B//PRICKLE1
AS-tDR-011389	i-tRF	N/A	CGGGAGACCGGGGC	MATN4//ABCC3//FAM43B//ZNF469//PKP4//RPA1//PLXNA2//SLFN12L//RBBP4//CCDC38
tRF1-ArgTCG	tRF-1	ArgTCG	N/A	N/A
tRF-1035	tRF-1	ThrCGT	GATATCCAACCTTCGGCTATAGGGTGGAGACTTTTT	PSG1//ADCK2//PLRG1//MAJIN//EFCAB2//MSH2//CELF3//FREM2//IZUMO4//MIEN1
tRF-Thr-CGT-003	tRF-1	ThrCGT	N/A	N/A
AS-tDR-011775	tRF-1	ValTAC	GTGGTGTGCTAGTTAATTT	CREM//IFNA5//ABRAXAS1//KATNAL2//GPR26//SLX4//SHB//MED23//INTS7//ZNF226
tRF-27:42-Gly-GCC-1-M3	tRF-2	GlyGCC	TCGCCTGCCACGCGGG	FCGR2A//DNLZ//FAM83C//ABHD17C//SPTB//IL12RB2//TFAP2B//PRRC2A//LMNTD2//TRIOBP
tRF-3021	tRF-3	AlaCGC;AlaTGC	TCCCCGGCATCTCCACCA	SEC14L1//PABPN1//RAB43//ISY1-RAB43//FAM171A2//SMTN//GLI2//RIC3//RETREG3//FRMPD4
tRF-57:75-Gln-CTG-2-M3	tRF-3	GlnCTG	AGTCTCGGTGGAACCTCCA	ST3GAL4//TOR3A//PRDM1//MYO1C//SLC6A7//GPR149//FNDC11//ACOXL//STAG2//HEXIM1
tRF-Glu-CTC-022	tRF-3	GluCTC	N/A	N/A
tRF-Glu-TTC-071	tRF-3	GluTTC	N/A	N/A
tRF-Gly-TCC-060	tRF-3	GlyTCC	N/A	N/A
3'-tRFIleAAT	tRF-3	IleAAT	N/A	N/A
tRF-65:86-Leu-CAA-1-M5	tRF-3	LeuCAA	TCGAATCCCACTTCTGACACCA	PTCH1//PCYT2//ALDH1L1//CLSPN//RBM43//NGB//ZNF26//PLN//TAF8//TENM4
tRF-3009	tRF-3	LeuTAA	ACCCCACTCCTGGTACCA	ANKRD27//DTWD1//SHANK3//ELN//GDF6//CCDC88C//SLC39A13//ACE//ID4//AC011498.4
3'tRF-LysTTT	tRF-3	LysTTT	N/A	N/A
tRF-53:71-chrM.Pro-TGG	tRF-3	ProTGG	AAGACTTTTTCTCTGACCA	RPL28//PHEX//TASOR2//TSC22D1//FLG//PRMT2//RNFT1//VCPIP1//MPRIP//PRKAG3
tRF-68:85-Ser-GCT-3-M4	tRF-3	SerGCT	ATCCCATCCTCGTCGCCA	SMAD6//ADAM10//BOP1//PPP2R5E//MZF1//ZEB2//ADRA2A//ELMSAN1//HECA//RASGRP2
tRF-68:85-Ser-TGA-4	tRF-3	SerTGA	ATCCTGTCGGCTACGCCA	CD320//GPSM1//DYRK3//HMCN2//FBXL14//TOR2A//MKS1//GALNT2//FANCC//ST3GAL2
tRF-Thr-AGT-003	tRF-3	ThrAGT	N/A	N/A
5'AlaTGC	tRF-5	AlaTGC	GCTCTACCACTGAGCTACATCCCC	FADS6//HIPK1//DIPK1C//ARL15//STAT3//MCEMP1//SMIM35//MEGF8//CLN8//EIF4G3
tRF-1:23-chrM.Ala-TGC	tRF-5	AlaTGC	AAGGGCTTAGCTTAATTAAAGTG	TFDP2//NTRK2//COMMD9//TSPAN6//PNPLA8//ADGRG4//NLRC3//ENSA//LRRN1//RHO
5'GluCTC	tRF-5	GluCTC	AATCCTAACCACTAGACCACCAGGGA	HMCN2//REEP4//KCNJ10//FIS1//SERPINB6//SPSB2//ZHX2//CD84//CADM1//B3GALT5
tRF5-GluCTC	tRF-5	GluCTC	N/A	N/A
tRF-Glu-TTC-010	tRF-5	GluTTC	TCCCACATGGTCTAGCGGTTAGGATTCCT	PPP1R26//ZNF654//COLGALT1//SGMS2//CLEC18A//CLEC18C//CLEC18B//GFER//SLC2A10//KCNF1
tRF-Glu-TTC-013	tRF-5	GluTTC	N/A	N/A
tRF-Glu-TTC-020	tRF-5	GluTTC	TCCCATATGGTCTAGCGGTTAGGATTCCTGG	CYB561A3//PPP1R26//SGMS2//MOB3C//CCDC24//CLEC18A//CLEC18B//CLEC18C//COPS5//GNAZ
tRF-Glu-TTC-025	tRF-5	GluTTC	TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGC	RFTN1//SLC25A6//PAQR4//EME2//ESPL1//TMEM69//TFCP2L1//BAHCC1//CLEC14A//PRKRA
tRF5-GluTTC	tRF-5	GluTTC	N/A	N/A
5'GlyGCC	tRF-5	GlyGCC	AATCCTAACCACTAGACCACCAGGGA	HMCN2//REEP4//KCNJ10//FIS1//SERPINB6//SPSB2//ZHX2//CD84//CADM1//B3GALT5
tRF-Gly-GCC-009	tRF-5	GlyGCC	GCATGGGTGGTTCAGTGGTAGAATTCTCGC	FCGR2A//SORCS1//POLR1A//ZNFX1//PPARGC1B//HSD17B4//PTCD3//PLA2R1//ITPKB//LPAR1
tRF-1:28-His-GTG-1	tRF-5	HisGTG	GCCGTGATCGTATAGTGGTTAGTACTCT	SHF//OTUB2//RBMXL2//MUC5B//CXCL16//TEP1//DUSP10//AGAP2//LUZP1//TET2
tRF-1:22-Val-AAC-1-M7	tRF-5	ValAAC	GTTTCCGTAGTGTAGTGGTTAT	CTNND2//HNRNPUL1//RGS8//ELMO3//ZBED2//NEFL//CEL//KRTAP19-8//MYH6//FAM171A1
AS-tDR-013428	tRF-5	N/A	GTCTAGTGGTTAGGATA	TFCP2L1//LRIT1//CAT//OR51F1//TBCE//ASXL3//HEATR5A//ITGB8//CNTN2//ARMCX4
TRA-AGC6-1.1	N/A	AlaAGC	N/A	N/A
tRF-Ala-AGC-056	N/A	AlaAGC	N/A	N/A
tRF-Ala-TGC-002	N/A	AlaTGC	N/A	N/A
tRF-Ala-TGC-027	N/A	AlaTGC	N/A	N/A
trna23-ArgCCG_1	N/A	ArgCCG	N/A	N/A
trna2-ArgCCT_1	N/A	ArgCCT	N/A	N/A
trna21-ArgCCT_1	N/A	ArgCCT	N/A	N/A
trna3-ArgCCT_1	N/A	ArgCCT	N/A	N/A
trna9-ArgTCT_1	N/A	ArgTCT	N/A	N/A
tRF-Asn-GTT-016	N/A	AsnGTT	N/A	N/A
tRF-Cys-GCA-007	N/A	CysGCA	N/A	N/A
tRF-Cys-GCA-027	N/A	CysGCA	N/A	N/A
tRF-Cys-GCA-029	N/A	CysGCA	N/A	N/A
tRF-55-75-Gln-CTG-2-M2	N/A	GlnCTG	N/A	N/A
trna1-GlnCTG_1	N/A	GlnCTG	N/A	N/A
trna146-GlnCTG_1	N/A	GlnCTG	N/A	N/A
trna3-GlnCTG_1	N/A	GlnCTG	N/A	N/A
trna42-GlnCTG_1	N/A	GlnCTG	N/A	N/A
trna49-GlnCTG_1	N/A	GlnCTG	N/A	N/A
trna7-GlnCTG_1	N/A	GlnCTG	N/A	N/A
trna99-GlnCTG_1	N/A	GlnCTG	N/A	N/A
tRF-GIn-TTG-019	N/A	GlnTTG	N/A	N/A
trna25-GluCTC_1	N/A	GluCTC	N/A	N/A
trna4-GluCTC_1	N/A	GluCTC	N/A	N/A
tRF-54-75-Glu-TTC-2	N/A	GluTTC	N/A	N/A
tRF-Glu-TTC-028	N/A	GluTTC	N/A	N/A
trna94-GluTTC_1	N/A	GluTTC	N/A	N/A
tiRNA-Gly-CCC-001	N/A	GlyCCC	N/A	N/A
trna133-GlyCCC_1	N/A	GlyCCC	N/A	N/A
trna4-GlyCCC_1	N/A	GlyCCC	N/A	N/A
tRF-Gly-GCC-009	N/A	GlyGCC	N/A	N/A
tRF-Gly-GCC-013	N/A	GlyGCC	N/A	N/A
tRF-Gly-GCC-014	N/A	GlyGCC	N/A	N/A
tRF-Gly-GCC-015	N/A	GlyGCC	N/A	N/A
tRF-Gly-GCC-016	N/A	GlyGCC	N/A	N/A
tRF-Gly-GCC-017	N/A	GlyGCC	N/A	N/A
trna10-GlyTCC_1	N/A	GlyTCC	N/A	N/A
tRF-lle-AAT-012	N/A	IleAAT	N/A	N/A
tRF-64-85-Leu-AAG-1-M4	N/A	LeuAAG	N/A	N/A
trna58-LeuCAA_1	N/A	LeuCAA	N/A	N/A
trna74-LeuCAA_1	N/A	LeuCAA	N/A	N/A
tiRNA-Leu-CAG-002	N/A	LeuCAG	N/A	N/A
tRF-Leu-CAG-023	N/A	LeuCAG	N/A	N/A
tRF-Leu-TAA-007	N/A	LeuTAA	N/A	N/A
trna83-LeuTAA_1	N/A	LeuTAA	N/A	N/A
tRF-Leu-TAG-014	N/A	LeuTAG	N/A	N/A
trna10-LysCTT_1	N/A	LysCTT	N/A	N/A
trna128-LysCTT_1	N/A	LysCTT	N/A	N/A
trna13-LysCTT_2	N/A	LysCTT	N/A	N/A
trna2-LysCTT_1	N/A	LysCTT	N/A	N/A
trna4-LysCTT_1	N/A	LysCTT	N/A	N/A
trna6-LysCTT_2	N/A	LysCTT	N/A	N/A
trna14-LysTTT_1	N/A	LysTTT	N/A	N/A
trna2-LysTTT_2	N/A	LysTTT	N/A	N/A
trna5-LysTTT_1	N/A	LysTTT	N/A	N/A
trna54-LysTTT_1	N/A	LysTTT	N/A	N/A
trna62-LysTTT_1	N/A	LysTTT	N/A	N/A
trna76-LysTTT_1	N/A	LysTTT	N/A	N/A
tRF-Met-CAT-016	N/A	MetCAT	N/A	N/A
tRF-Met-CAT-017	N/A	MetCAT	N/A	N/A
tRF-Met-CAT-051	N/A	MetCAT	N/A	N/A
trna10-MetCAT_1	N/A	MetCAT	N/A	N/A
trna129-MetCAT_1	N/A	MetCAT	N/A	N/A
trna142-MetCAT_1	N/A	MetCAT	N/A	N/A
trna150-MetCAT_1	N/A	MetCAT	N/A	N/A
trna169-MetCAT_1	N/A	MetCAT	N/A	N/A
trna171-MetCAT_1	N/A	MetCAT	N/A	N/A
trna2-MetCAT_1	N/A	MetCAT	N/A	N/A
trna20-MetCAT_2	N/A	MetCAT	N/A	N/A
trna32-MetCAT_1	N/A	MetCAT	N/A	N/A
trna61-MetCAT_1	N/A	MetCAT	N/A	N/A
tRF-Ser-AGA-017	N/A	SerAGA	N/A	N/A
tRF-Ser-GCT-078	N/A	SerGCT	N/A	N/A
tRF-Thr-AGT-022	N/A	ThrAGT	N/A	N/A
tRF-Thr-CGT-004	N/A	ThrCGT	N/A	N/A
trna12-TrpCCA_1	N/A	TrpCCA	N/A	N/A
trna152-ValCAC_1	N/A	ValCAC	N/A	N/A
tRF-55-76-Val-TAC-1	N/A	ValTAC	N/A	N/A
tRF-36-PJB7MNLE308HP1B	N/A	N/A	N/A	N/A
tRF-Cys-GCA-029	N/A	N/A	N/A	N/A
Trnm	N/A	N/A	N/A	N/A
tsRNA-08579	N/A	N/A	N/A	N/A
tsRNA-21109	N/A	N/A	N/A	N/A
tsRNA-22025	N/A	N/A	N/A	N/A

tsRNADisease v1.0

Associated tsRNAs in Multiple Sclerosis