The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tiRNA-5GluCTC | 5'-tiRNA | GluCTC | N/A | N/A |
| tiRNA-Glu-CTC-001 | 5'-tiRNA | GluCTC | TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTC | TFCP2L1//PAQR4//EME2//TMEM69//RFTN1//TMEM92//CCDC159//PFKFB3//SLC25A48//TPCN2 |
| tiRNA-Glu-TTC-003 | 5'-tiRNA | GluTTC | TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGCTT | PAQR4//TMEM69//RFTN1//BAHCC1//DDX60//TFCP2L1//PHETA1//CHRNB4//SLC25A6//EME2 |
| tRFGluTTC | 5'-tiRNA | GluTTC | TCCCACATGGTCTAGCGGTTAGGATTCCTGGTTTT | SGMS2//MOB3C//PPP1R26//KMT2B//WSCD2//SRGAP2C//ZNF654//NFKBIL1//KIF1B//DDX41 |
| tiRNA-5′GlyGCC | 5'-tiRNA | GlyGCC | N/A | N/A |
| tiRNA-Gly-GCC-001 | 5'-tiRNA | GlyGCC | GCATAGGTGGTTCAGTGGTAGAATTCTTGCCTG | FCGR2A//LHX8//ZNF513//NDUFAF1//ZNF778//KCTD9//ERAS//SPRN//SORCS1//ARPP21 |
| tiRNA-5HisGTG | 5'-tiRNA | HisGTG | N/A | N/A |
| tiRNA-iMet-CAT-001 | 5'-tiRNA | iMetCAT | AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCC | TBC1D5//SIRPB1//IFIH1//SRPX//LHX6//ZNF579//SETD4//SRRM2//ZFAND3//CCL14 |
| tiRNA-Pro-CGG-001 | 5'-tiRNA | ProCGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTC | KCNJ4//HMGN2//STAB2//NOMO2//NOMO3//TRMT5//BLMH//GTF3C4//ASGR1//KEAP1 |
| tiRNA-1:20-chrM.Ser-GCT | 5'-tiRNA | SerGCT | N/A | N/A |
| tiRNA-Val-AAC-002 | 5'-tiRNA | ValAAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTA | ZBED2//CTNND2//CDYL2//SLC12A5//KIAA1549//HK2//CLSTN3//CELA2A//ACAP1//LRRN3 |
| tiRNA-5′ValCAC | 5'-tiRNA | ValCAC | N/A | N/A |
| tiRNA-Val-CAC-002 | 5'-tiRNA | ValCAC | GTTTCCGTAGTGTAGCGGTTATCACATTCGCCTC | PLEKHG5//CDYL2//KLK10//GPC6//GALNTL6//ILRUN//SOCS2//SNX1//TRERF1//CIAO3 |
| tiRNA-Val-CAC-003 | 5'-tiRNA | ValCAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//CTNND2//SLC12A5//CDYL2//KIAA1549//STK36//CELA2A//ACAP1//CDC25C//HK2 |
| mt-i-tRF-GluUUC | i-tRF | GluTTC | N/A | N/A |
| tRF-+1:T24-Leu-AAG-1 | tRF-1 | LeuAAG | N/A | N/A |
| tRF-+1:T25-Leu-CAG-1-6 | tRF-1 | LeuCAG | ATATGTGTTTTCCGTCCTTACTTTT | PTPRG//ADGRL4//ENC1//PITPNA//RMDN3//SMARCB1//SLC8A3//CASC3//PHIP//BCL2L11 |
| tRF-1020 | tRF-1 | PheGAA | GAGAGCGCTCGGTTTTT | PLK2//NCAM1//JCAD//SLC22A23//PARS2//KLHL36//DPPA4//CD99//PAPPA//CXorf40B |
| tRF-22-8EKSP1852 | tRF-3 | AlaAGC | TCAATCCCCGGCACCTCCACCA | NEO1//RBM27//FAM171A2//DCHS1//RAB43//ISY1-RAB43//IFI44L//SMTN//MEX3A//RETREG3 |
| tRF-56:75-Gln-CTG-2 | tRF-3 | GlnCTG | N/A | N/A |
| tRF-55:75-Gln-TTG-1-M2 | tRF-3 | GlnTTG | N/A | N/A |
| tRF-61:77-Ile-AAT-2-M3 | tRF-3 | IleAAT | N/A | N/A |
| tRF-3001a | tRF-3 | LeuAAG | ATCCCACCGCTGCCACCA | ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB |
| tRF-3001a | tRF-3 | LeuAAG;LeuTAG | ATCCCACCGCTGCCACCA | ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB |
| tRF-66:86-Leu-CAG-1 | tRF-3 | LeuCAG | N/A | N/A |
| tRF-68:86-Leu-CAG-1 | tRF-3 | LeuCAG | N/A | N/A |
| tRF-Phe-GAA-001 | tRF-3 | PheGAA | TATATACCCGGGTTTCGGCACCA | NFATC3//NFE4//PKN3//LRP10//CSMD2//PHF20//TUBA4A//HAGHL//TNFSF12-TNFSF13//TNFSF13 |
| tRF-56:77-Thr-AGT-3 | tRF-3 | ThrAGT | N/A | N/A |
| tRF-56:75-Thr-CGT-2-M2 | tRF-3 | ThrCGT | N/A | N/A |
| tRF-58:76-Tyr-ATA-1 | tRF-3 | TyrATA | N/A | N/A |
| tRF-57:76-Tyr-GTA-1-M2 | tRF-3 | TyrGTA | N/A | N/A |
| tRF-18-BS68BFD2 | tRF-3 | ValAAC;ValCAC | AACCGGGCGGAAACACCA | STK32A//LTBP3//ITGB3BP//DENND6A//CDYL//HNRNPH1//DNAJC5//SH3BP5L//LYPLA1//LPO |
| tRF-25-R9ODMJ6B26 | tRF-3 | ValAAC;ValCAC | GGTTCGAAACCGGGCGGAAACACCA | HECTD4//LTBP3//MTURN//RMND5A//ESR1//STK32A//MYO1G//ERAP1//MOV10//GNG2 |
| tRF-38-QB1MK8YUBS68BFD2 | tRF-3 | ValAAC;ValCAC | GCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCA | FAM160B2//AKAP1//FANCM//GDF2//ITGB3BP//LRRC57//IL20RB//CORO1C//PCYT1A//PNPLA5 |
| tRF-56:72-chrM.Val-TAC | tRF-3 | ValTAC | N/A | N/A |
| tRF-1:14-chrM.Ala-TGC | tRF-5 | AlaTGC | N/A | N/A |
| tRF-Glu-CTC-010 | tRF-5 | GluCTC | TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGC | TFCP2L1//EME2//SLC25A48//TMEM92//RFTN1//SLC25A6//PAQR4//CCDC159//PDE12//ALKBH2 |
| tRF-Glu-TTC-010 | tRF-5 | GluTTC | TCCCACATGGTCTAGCGGTTAGGATTCCT | PPP1R26//ZNF654//COLGALT1//SGMS2//CLEC18A//CLEC18C//CLEC18B//GFER//SLC2A10//KCNF1 |
| tRF-Glu-TTC-020 | tRF-5 | GluTTC | TCCCATATGGTCTAGCGGTTAGGATTCCTGG | CYB561A3//PPP1R26//SGMS2//MOB3C//CCDC24//CLEC18A//CLEC18B//CLEC18C//COPS5//GNAZ |
| tRF-Glu-TTC-025 | tRF-5 | GluTTC | TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGC | RFTN1//SLC25A6//PAQR4//EME2//ESPL1//TMEM69//TFCP2L1//BAHCC1//CLEC14A//PRKRA |
| tRF-Glu-TTC-069 | tRF-5 | GluTTC | TCCCTGGTGGTCTAGTGGCTAGGATTCGG | TFCP2L1//NPY4R//NPY4R2//GALNT11//SLC25A6//UBE2J2//ALS2CL//PHETA1//MUC4//BAHCC1 |
| tRF-Gly-CCC-009 | tRF-5 | GlyCCC | GCATTGGTGGTTCAGTGGTAGAAT | FCGR2A//OLFM3//OR7C1//MUCL1//PCGF5//HSD17B4//MRRF//PEG10//FAM149B1//SH3GLB1 |
| tRF-Gly-CCC-039 | tRF-5 | GlyCCC | GCGCCGCTGGTGTAGTGGTATCATGCAA | PTPRK//ZNF273//ESPN//SSH1//FKBP1A//STAG3//DMAP1//KMT2D//ZNF467//GATD1 |
| tRF-Gly-GCC-007 | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTC | FCGR2A//SORCS1//HSD17B4//POLR1A//MRPS5//SP3//PPARGC1B//TNS2//DDI1//CDCP2 |
| tRF-Gly-GCC-008 | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCG | FCGR2A//POLR1A//SORCS1//HSD17B4//PPARGC1B//PTCD3//MRPS5//SP3//OTUB2//TNS2 |
| tRF-Gly-GCC-009 | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//SORCS1//POLR1A//ZNFX1//PPARGC1B//HSD17B4//PTCD3//PLA2R1//ITPKB//LPAR1 |
| tRF-His-GTG-008 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCG | SHF//ARHGAP25//EVPLL//SUSD5//OTUB2//RBMXL2//LHFPL6//FOXC1//PTPRN//ELK4 |
| tRF-1:16-Leu-TAA-1 | tRF-5 | LeuTAA | ACCAGGATGGCCGAGT | C6orf201//TENM4//GSTT2B//GSTT2//AQP10//HDAC1//TMEM42//GCGR//MAN2B2//ARL2BP |
| tRF-Pro-AGG-004 | tRF-5 | ProAGG;ProCGG;ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGC | KCNJ4//NOMO3//NOMO2//STAB2//BLMH//PTPRU//ZSWIM8//D2HGDH//MAN1C1//PRDM7 |
| tRF-1:31-Ser-AGA-1-M6 | tRF-5 | SerAGA | N/A | N/A |
| tRF-1:22-chrM.Ser-GCT | tRF-5 | SerGCT | GAGAAAGCTCACAAGAACTGCT | PTPRZ1//C4orf33//GTPBP10//SLC24A4//SCGN//ZNF540//TBC1D19//DTX4//SYNPO2//ARIH1 |
| tRF-1:14-Tyr-GTA-1-M7 | tRF-5 | TyrGTA | CCTTCGATAGCTCA | SOX11//TMED3//SRPK1//ZMAT3//SYT5//ZNF862//HAP1//GDPD2//CHMP7//MYH10 |
| tRF-Val-AAC-016 | tRF-5 | ValAAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCC | CTNND2//ZBED2//SLC12A5//CLSTN3//HK2//KIAA1549//CDYL2//NLRC5//ACAP1//CLPB |
| tRF-Val-CAC-007 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTT | SREBF2//ZBED2//FNTB//CHURC1-FNTB//CASZ1//SCIN//STARD6//THOP1//PTPN14//TUBB |
| TRA-AGC6-1.1 | N/A | AlaAGC | N/A | N/A |
| tRF-Ala-AGC-052 | N/A | AlaAGC | N/A | N/A |
| tRF-Cys-GCA-003 | N/A | CysGCA | N/A | N/A |
| tRF-Cys-GCA-036 | N/A | CysGCA | N/A | N/A |
| tRF-1-28-Glu-TTC-3-M2 | N/A | GluTTC | N/A | N/A |
| tRF-Glu-TTC-044 | N/A | GluTTC | N/A | N/A |
| tRF-Glu-TTC-077 | N/A | GluTTC | N/A | N/A |
| tRF-Gly-GCC-009 | N/A | GlyGCC | N/A | N/A |
| tRF-Gly-GCC-020 | N/A | GlyGCC | N/A | N/A |
| tRF-Gly-GCC-035 | N/A | GlyGCC | N/A | N/A |
| tRF-1-31-His-GTG-1 | N/A | HisGTG | N/A | N/A |
| tRF-131-His-GTG-1 | N/A | HisGTG | N/A | N/A |
| tRF-Leu-TAA-021 | N/A | LeuTAA | N/A | N/A |
| tRF-Lys-CTT-017 | N/A | LysCTT | N/A | N/A |
| tRF-Ser-TGA-012 | N/A | SerTGA | N/A | N/A |
| miR-23b-3p | N/A | N/A | N/A | N/A |
| tiRNA-Val | N/A | N/A | N/A | N/A |
| tiRNA-Val-CAC-002 | N/A | N/A | N/A | N/A |
| tRF-1020 | N/A | N/A | N/A | N/A |
| tRF-18-BS68BFD2 | N/A | N/A | AACCGGGCGGAAACACCA | STK32A//LTBP3//ITGB3BP//DENND6A//CDYL//HNRNPH1//DNAJC5//SH3BP5L//LYPLA1//LPO |
| tRF-25-R9ODMJ6B26 | N/A | N/A | GGTTCGAAACCGGGCGGAAACACCA | HECTD4//LTBP3//MTURN//RMND5A//ESR1//STK32A//MYO1G//ERAP1//MOV10//GNG2 |
| tRF-38-QB1MK8YUBS68BFD2 | N/A | N/A | GCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCA | FAM160B2//AKAP1//FANCM//GDF2//ITGB3BP//LRRC57//IL20RB//CORO1C//PCYT1A//PNPLA5 |