The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tiRNA-5GluCTC | 5'-tiRNA | GluCTC | N/A | N/A |
| tiRNA-Glu-CTC-001 | 5'-tiRNA | GluCTC | TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTC | TFCP2L1//PAQR4//EME2//TMEM69//RFTN1//TMEM92//CCDC159//PFKFB3//SLC25A48//TPCN2 |
| tRF5-GluCTC | 5'-tiRNA | GluCTC | TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT | TFCP2L1//EME2//RFTN1//TMEM92//PAQR4//CCDC159//SLC25A48//SLC25A6//TMEM69//CHRNB4 |
| tiRNA-5′GlyGCC | 5'-tiRNA | GlyGCC | N/A | N/A |
| tiRNA-Gly-GCC-003 | 5'-tiRNA | GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG | FCGR2A//DPF1//ABLIM2//LPAR1//COL6A5//ERAS//SLC26A6//ST3GAL2//ZNF26//CACNA1E |
| tiRNA-5HisGTG | 5'-tiRNA | HisGTG | N/A | N/A |
| tiRNA-Lys-CTT-003 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTC | EBI3//WDR54//BCL7C//GNA14//ZBTB17//CFAP410//GRK3//CFAP43//ZDHHC3//GPER1 |
| tiRNA-Met-CAT-001 | 5'-tiRNA | MetCAT | N/A | N/A |
| tiRNA-Pro-CGG-001 | 5'-tiRNA | ProCGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTC | KCNJ4//HMGN2//STAB2//NOMO2//NOMO3//TRMT5//BLMH//GTF3C4//ASGR1//KEAP1 |
| tiRNA-1:20-chrM.Ser-GCT | 5'-tiRNA | SerGCT | N/A | N/A |
| tiRNA-5′ValCAC | 5'-tiRNA | ValCAC | N/A | N/A |
| tiRNA-Val-CAC-003 | 5'-tiRNA | ValCAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//CTNND2//SLC12A5//CDYL2//KIAA1549//STK36//CELA2A//ACAP1//CDC25C//HK2 |
| tRF-36-F900BY4D84KRIME | i-tRF | SerGCT | AGCTCACAAGAACTGCTAACTCATGCCCCCATGTCT | CDS2//FBN3//ZBTB7A//SPI1//ZDHHC22//HADHB//LIMD1//ACVR1//AHDC1//TRIM74 |
| tRF1-ArgTCG | tRF-1 | ArgTCG | N/A | N/A |
| tRF-+1:T24-Leu-AAG-1 | tRF-1 | LeuAAG | N/A | N/A |
| tRF-+1:T25-Leu-CAG-1-6 | tRF-1 | LeuCAG | ATATGTGTTTTCCGTCCTTACTTTT | PTPRG//ADGRL4//ENC1//PITPNA//RMDN3//SMARCB1//SLC8A3//CASC3//PHIP//BCL2L11 |
| tRF-1020 | tRF-1 | PheGAA | GAGAGCGCTCGGTTTTT | PLK2//NCAM1//JCAD//SLC22A23//PARS2//KLHL36//DPPA4//CD99//PAPPA//CXorf40B |
| tRF-1001 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTATTT | GOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8 |
| tRF-56:75-Gln-CTG-2 | tRF-3 | GlnCTG | N/A | N/A |
| tRF-55:75-Gln-TTG-1-M2 | tRF-3 | GlnTTG | N/A | N/A |
| tRF-61:77-Ile-AAT-2-M3 | tRF-3 | IleAAT | N/A | N/A |
| tRF-3001a | tRF-3 | LeuAAG | ATCCCACCGCTGCCACCA | ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB |
| tRF-3001a | tRF-3 | LeuAAG;LeuTAG | ATCCCACCGCTGCCACCA | ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB |
| tRF-66:86-Leu-CAG-1 | tRF-3 | LeuCAG | N/A | N/A |
| tRF-68:86-Leu-CAG-1 | tRF-3 | LeuCAG | N/A | N/A |
| tRF-Phe-GAA-001 | tRF-3 | PheGAA | TATATACCCGGGTTTCGGCACCA | NFATC3//NFE4//PKN3//LRP10//CSMD2//PHF20//TUBA4A//HAGHL//TNFSF12-TNFSF13//TNFSF13 |
| tRF-Phe-GAA-012 | tRF-3 | PheGAA | CATCACCCCATAAACACCA | ZNF630//AHNAK//TMEM8B//PKP3//FADS2//MOB3B//MED1//APEH//FBXO3//KRT1 |
| 3'-tRF-ProTGG-19 | tRF-3 | ProTGG | N/A | N/A |
| tRF-56:77-Thr-AGT-3 | tRF-3 | ThrAGT | N/A | N/A |
| tRF-56:75-Thr-CGT-2-M2 | tRF-3 | ThrCGT | N/A | N/A |
| tRF-Trp-TCA-005 | tRF-3 | TrpTCA | ATACTTAATTTCTGCCA | NPIPB6//OR2V1//PPP6R3//NPIPB7//NIPBL//RBM7//SELL//CEP41//AC138894.1//ZMYM5 |
| tRF-58:76-Tyr-ATA-1 | tRF-3 | TyrATA | N/A | N/A |
| tRF-57:76-Tyr-GTA-1-M2 | tRF-3 | TyrGTA | N/A | N/A |
| tRF-Tyr-GTA-005 | tRF-3 | TyrGTA | TCCGGCTCGAAGGACCA | KLHDC4//GAD2//CHST3//CHD2//TMEM41A//IPO13//CCDC106//DUS2//NRROS//STMN3 |
| tRF-Tyr-GTA-007 | tRF-3 | TyrGTA | TTCCGGCTCGAAGGACCA | KLHDC4//GAD2//CHD2//TMEM41A//NRROS//CCDC106//IPO13//ATAD1//AP2A2//DUS2 |
| tRF-Tyr-GTA-010 | tRF-3 | TyrGTA | ATCCGGCTCGAAGGACCA | KLHDC4//GAD2//CHST3//CHD2//TMEM41A//CCDC106//NRROS//DUS2//IPO13//FAM135B |
| tRF-56:72-chrM.Val-TAC | tRF-3 | ValTAC | N/A | N/A |
| tRF-1:14-chrM.Ala-TGC | tRF-5 | AlaTGC | N/A | N/A |
| tRF-Glu-CTC | tRF-5 | GluCTC | N/A | N/A |
| tRF5-GluCTC | tRF-5 | GluCTC | N/A | N/A |
| tRF-1:28-Glu-TTC-2 | tRF-5 | GluTTC | N/A | N/A |
| tRF-23-87R8WP9IY | tRF-5 | GluTTC | TCCCTGGTGGTCTAGTGGCTAGG | TFCP2L1//TUBA1B//EPN2//CDC42BPG//INSYN1//JSRP1//DECR2//ARMCX4//KLHL38//TNFSF12 |
| tRF-40-86J8WPMN1E8Y7Z2R | tRF-5 | GluTTC | TCCCACATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCC | GFER//PPP1R26//WSCD2//ING5//ADPRHL1//SGMS2//LYPD2//KCNF1//ADAMTS19//RACGAP1 |
| tRF5-GluTTC | tRF-5 | GluTTC | N/A | N/A |
| tRF-Gly-CCC-039 | tRF-5 | GlyCCC | GCGCCGCTGGTGTAGTGGTATCATGCAA | PTPRK//ZNF273//ESPN//SSH1//FKBP1A//STAG3//DMAP1//KMT2D//ZNF467//GATD1 |
| tRF-1:32-Gly-TCC-3 | tRF-5 | GlyTCC | N/A | N/A |
| tRF-1:16-Leu-TAA-1 | tRF-5 | LeuTAA | ACCAGGATGGCCGAGT | C6orf201//TENM4//GSTT2B//GSTT2//AQP10//HDAC1//TMEM42//GCGR//MAN2B2//ARL2BP |
| tRF-Lys-TTT-024 | tRF-5 | LysTTT | CACTGTAAAGCTAACT | ANK3//FAM91A1//SNX12//MELTF//HAND2//NCKIPSD//TTLL3//APOB//NDE1//FGF13 |
| tRF-1:31-Ser-AGA-1-M6 | tRF-5 | SerAGA | N/A | N/A |
| tRF-1:22-chrM.Ser-GCT | tRF-5 | SerGCT | GAGAAAGCTCACAAGAACTGCT | PTPRZ1//C4orf33//GTPBP10//SLC24A4//SCGN//ZNF540//TBC1D19//DTX4//SYNPO2//ARIH1 |
| tRF-Ser-TGA-011 | tRF-5 | SerTGA | GCAGCGATGGCCGAGT | RNF139//SLC14A2//C12orf43//CACNA1D//CACNA1A//FANCE//NXPE3//SNAI3//RHAG//KAZN |
| tRF-1:14-Tyr-GTA-1-M7 | tRF-5 | TyrGTA | CCTTCGATAGCTCA | SOX11//TMED3//SRPK1//ZMAT3//SYT5//ZNF862//HAP1//GDPD2//CHMP7//MYH10 |
| tRF-Val-CAC-007 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTT | SREBF2//ZBED2//FNTB//CHURC1-FNTB//CASZ1//SCIN//STARD6//THOP1//PTPN14//TUBB |
| tRF-Arg-TCT-007 | N/A | ArgTCT | N/A | N/A |
| tRF-Cys-GCA-02 | N/A | CysGCA | N/A | N/A |
| tRF-Glu-CTC-016 | N/A | GluCTC | N/A | N/A |
| tRF-1-28-Glu-TTC-3-M2 | N/A | GluTTC | N/A | N/A |
| tRF-Gly-CCC-036 | N/A | GlyCCC | N/A | N/A |
| tRF-1-31-His-GTG-1 | N/A | HisGTG | N/A | N/A |
| tRF-131-His-GTG-1 | N/A | HisGTG | N/A | N/A |
| tRF-Met-CAT-007 | N/A | MetCAT | N/A | N/A |
| tRF-Val-AAC-027 | N/A | ValAAC | N/A | N/A |
| miR-23b-3p | N/A | N/A | N/A | N/A |
| tiRNA-Val | N/A | N/A | N/A | N/A |
| tRF-1001 | N/A | N/A | N/A | N/A |
| tRF-1020 | N/A | N/A | N/A | N/A |