The tsRNA and Disease Database (version 1.0)
tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
---|---|---|---|---|
tRF-35-LR6XQ6S8V0J8O9 | 5'-tiRNA | LysCTT | CGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTC | EBI3//WDR54//BCL7C//GPER1//GNA14//PDCL//ZBTB17//GRK3//CFAP410//CFAP43 |
tRF-19-JN5XR4HO | i-tRF | AsnGTT | CAGTTGATTAGGGTGCTTA | PHKA2//SPRYD3//C5orf51//PGD//ABCD4//DGKI//GLMP//KCTD12//MYO9B//VCPIP1 |
tRF-Asn-GTT-010 | i-tRF | AsnGTT | CGGCTGTTAACCGAA | TSPOAP1//GKAP1//SMYD5//CENPC//WDFY4//MAS1//KCNJ14//GBX2//LPP//TRMT9B |
tRF-22-JNORRNLNJ | i-tRF | GlyTCC | CAGTTGACCCGGGTTCGATCC | NLRX1//ZNF699//TRERF1//MAPK12//RNGTT//MTERF4//DLG3//ZIC1//SON//PARP10 |
tRF-18-L61MQK05 | i-tRF | IleAAT | CGCCAAGGTCGCGGGTTC | CYBC1//PEX10//MAPK9//ARID3B//SMCR8//DAB2IP//ZNF185//ULK1//RAD51D//CASZ1 |
tRF-20-FWVDX0HX | i-tRF | PheGAA | AGCGTTAGACTGAAGATCTA | GNA13//FREM2//ASAP2//ATF5//ZNF836//WDR27//PPP1R10//SNAP91//ZNF525//GRAMD1B |
3P_tRNA-Arg-ACG-2-3 | tRF-1 | ArgACG | GGTGTTAATCTTGGCTTT | NDST3//PLCL2//IGSF22//SEMA3D//GLRA4//ANKRD50//IP6K1//PTPN2//ADGRV1//ARMCX3 |
tRF-+1:T14-Arg-CCT-4 | tRF-1 | ArgCCT | N/A | N/A |
3P_tRNA-Arg-TCG-1-1 | tRF-1 | ArgTCG | AAGGGAGGTTATGATTAACTTT | ADAMTS12//HNRNPU//CTDSP2//ABCA4//DTNA//DGAT2L6//SLC25A1//KLHL7//CYYR1//AFAP1L1 |
tRF-+1:T31-Gly-CCC-1-2 | tRF-1 | GlyCCC | N/A | N/A |
3P_tRNA-Ile-AAT-2-1 | tRF-1 | IleAAT | AGTATTCTCTGTGGCTTT | PHACTR2//OSTM1//CIT//DNAH11//PPP1R8//TAF1//TAF1L//ABCC9//ASB11//KMT2B |
tRF-+1:T18-Ile-AAT-5-2 | tRF-1 | IleAAT | N/A | N/A |
tRF-+1:T15-Leu-AAG-2-4 | tRF-1 | LeuAAG | N/A | N/A |
tRF-+1:T25-Leu-CAG-1-6 | tRF-1 | LeuCAG | ATATGTGTTTTCCGTCCTTACTTTT | PTPRG//ADGRL4//ENC1//PITPNA//RMDN3//SMARCB1//SLC8A3//CASC3//PHIP//BCL2L11 |
3P_tRNA-Leu-TAA-3-1 | tRF-1 | LeuTAA | AAGAGGAGTTGTTTT | MTRR//AMPH//FOXR1//ERICH1//PLS3//ZBTB44//AASS//FAM180A//DENND5A//SYNRG |
tRF-+1:T14-Lys-TTT-3-2 | tRF-1 | LysTTT | N/A | N/A |
3P_tRNA-SeC-TCA-1-1 | tRF-1 | SecTCA | GGTAGTAACTAAGCGCCTTAAATCTTACTTATCGAACCGGACTTCTTT | SYTL4//ZFHX2//RBMS2//VANGL2//PLEKHD1//DCLK1//TBC1D8B//TLN1//GPATCH1//GPRIN3 |
3P_tRNA-ThrAGT-2-2 | tRF-1 | ThrAGT | TGATTTCTGTACCTTACACATTT | BCAS1//XPO7//ZNF718//AGFG2//ZNF595//NBR1//PSD4//METTL8//COLEC10//ZNF432 |
3P_tRNA-Thr-CGT-4-1 | tRF-1 | ThrCGT | GAGACCCGAGGTAGGGCTTTGGCTGTGGGGAAGTCGGGTTT | FUT5//AC024592.3//CAMK1//CDCA4//TRAF4//NUTM2B//NUTM2D//NUTM2A//NUTM2E//NUPR1 |
3P_tRNA-Thr-TGT-5-1 | tRF-1 | ThrTGT | TGCGAAACTACTTTCTTGATTCAGGTGTTT | PPP1R3E//LRRIQ1//AP1G1//TICRR//APOBEC3C//TBL2//MAGI3//EDNRB//ZNF362//SMG6 |
3P_tRNA-Val-TAC-1-1 | tRF-1 | ValTAC | TGAGATGTTACCTAGCGTTT | ZSCAN23//CLCNKA//SLC41A3//HIPK2//TNFRSF11A//WDR35//COBL//TLN1//TMCC1//HDHD5 |
tRF-28:41-Gln-CTG-1-M7 | tRF-2 | GlnCTG | N/A | N/A |
3a_tRF-Ala-AGC/TGC | tRF-3 | AlaAGC;AlaTGC | TCCCCGGCACCTCCACCA | SEC14L1//RAB43//ISY1-RAB43//FAM171A2//SMTN//RIC3//RETREG3//EGLN3//DCHS1//PLXNB1 |
tRF-3-tRNA-Ala-TGC-4-1 | tRF-3 | AlaTGC | N/A | N/A |
3a_tRF-Asn-GTT | tRF-3 | AsnGTT | CCCACCCAGGGACGCCA | PRRT4//NFE2L1//C12orf66//STON2//RPL7A//TMEM129//PLEKHG4B//KIF26B//REXO4//CPOX |
tRF-3-tRNA-Asp-GTC-2-7 | tRF-3 | AspGTC | N/A | N/A |
tsRNA-3025a | tRF-3 | AspGTC | TTCCCCGACGGGGAGCCA | AC236972.4//ACTR2//SLC35E4//PDE4C//ANKRD11//GPS1//C5orf63//DIP2B//NDUFA8//FIGNL2 |
tsRNA-3025b | tRF-3 | AspGTC | TCGATTCCCCGACGGGGAGCCA | NDUFA8//FIGNL2//MAOA//XKR4//CDC14B//ELOF1//ACTR2//RSBN1//C5orf63//CHRNA4 |
tRF-56:75-Gln-CTG-1-M2 | tRF-3 | GlnCTG | N/A | N/A |
tRF-22-8BWS7K092 | tRF-3 | GlnTTG | TCAAATCTCGGTGGGACTCCA | HIVEP3//TOR3A//KRBA1//NOVA1//ZNF510//SLC4A8//ELN//ZMYM4//WDR33//TBCC |
tsRNA-3045b | tRF-3 | GluCTC | TCGATTCCCGGTCAGGGAACCA | MYOCOS//RNF213//MID1//CHST3//PROM1//SCAF4//UBQLN4//PAXBP1//LLGL2//CDH9 |
tsRNA-3029b | tRF-3 | GluCTC;GluTTC | TCGATTCCCGGTCAGGGAACCA | MYOCOS//RNF213//MID1//CHST3//PROM1//SCAF4//UBQLN4//PAXBP1//LLGL2//CDH9 |
3a_tRF-Glu-TTC/CTC | tRF-3 | GluTTC;GluCTC | TTCCCGGTCAGGGAACCA | MYOCOS//PXDNL//C17orf80//RNF213//MID1//SCAF4//FBP2//OR7A5//CHST3//OSBP2 |
tsRNA-3042b | tRF-3 | GlyCCC | TCGATTCCCGGCCAATGCACCA | FCGR2A//MAVS//DDX51//PNPT1//PRSS36//DPM1//CACNA1E//ANKAR//PPP1R15A//ADH6 |
tsRNA-3027a | tRF-3 | GlyCCC;GlyGCC | TCCCGGCCAATGCACCA | FCGR2A//BEND6//MCC//BAZ1B//SORCS3//NAP1L4//INPPL1//KHDC3L//PNPT1//PCNT |
tsRNA-3027b | tRF-3 | GlyGCC | TCGATTCCCGGCCAATGCACCA | FCGR2A//MAVS//DDX51//PNPT1//PRSS36//DPM1//CACNA1E//ANKAR//PPP1R15A//ADH6 |
tsRNA-3028b | tRF-3 | GlyGCC | TCGATTCCCGGCCCATGCACCA | DDX51//FCGR2A//CYP2W1//NAP1L4//ANXA2//AHDC1//PRSS36//MLST8//CACNA1E//SPPL2B |
3b_tRF-Leu-CAA/CGA_n1 | tRF-3 | LeuCAA;LeuCAG | TCGAATCCCACTTCTGACACCA | PTCH1//PCYT2//ALDH1L1//CLSPN//RBM43//NGB//ZNF26//PLN//TAF8//TENM4 |
3b_tRF-Leu-TAA | tRF-3 | LeuTAA | TCGAACCCCACTCCTGGTACCA | DTWD1//CCDC88C//SHANK3//ELN//GDF6//SLC39A13//SIAH1//TMEM185B//AC011498.4//LHFPL5 |
tRF-69:86-Leu-TAA-1 | tRF-3 | LeuTAA | N/A | N/A |
tRF-22-WE8SSP6D2 | tRF-3 | PheGAA;GluCTC;GluTTC | TCGATCCCGGTCAGGGAACCA | MYOCOS//C17orf80//OR7A5//BAHCC1//UGT1A6//PLCL2//CHST3//CFAP52//DNAI1//TPM4 |
tRF-22-WE884U1D2 | tRF-3 | TyrGTA | TCGATTCCGGCTCGAAGGACCA | KLHDC4//TNR//REPIN1//ARHGAP33//DUS2//GAD2//TTC8//DNMT3A//MDN1//UROC1 |
tRF-60:76-Tyr-GTA-1-M5 | tRF-3 | TyrGTA | N/A | N/A |
tRF-3-tRNA-Val-CAC-3-1 | tRF-3 | ValCAC | N/A | N/A |
tsRNA-5002a | tRF-5 | ArgCCG | GACCCAGTGGCCTA | UCK2//ITFG2//MPRIP//SSH2//ITGB4//PAX5//SPIN2B//STK35//HPCAL4//CALM1 |
tsRNA-5002b | tRF-5 | ArgCCG | GACCCAGTGGCCTAATGGA | UCK2//ZBED3//PLAUR//STAT5B//PAX5//SPRY4//ITSN1//CALM1//CHML//OPN3 |
tRF-20-LRJ4PXI2 | tRF-5 | ArgCCT | CGCCCCAGTGGCCTAATGGA | COA1//PTK2//ZNF566//ABCF1//ZBTB3//PLAUR//ACE//GRB10//AATK//RHPN1 |
tRF-1:29-Gln-CTG-3 | tRF-5 | GlnCTG | N/A | N/A |
tRF-1:29-Gln-CTG-4-M2 | tRF-5 | GlnCTG | N/A | N/A |
tsRNA-5021a | tRF-5 | GlnCTG | GGTTCCATGGTGTA | NFKB2//SOAT2//ATP13A2//PTPRS//AC008676.3//TRIM35//ELAVL4//LRRC55//BBX//ATG2B |
tRF-1:14-Gln-TTG-1-M3 | tRF-5 | GlnTTG | N/A | N/A |
tRF-1:22-chrM.Gln-TTG | tRF-5 | GlnTTG | N/A | N/A |
tsRNA-5004a | tRF-5 | GlyGCC | GCATTGGTGGTTCAGTGGTAGA | FCGR2A//PRELP//OR7C1//MUCL1//MRRF//PEG10//HSD17B4//OLFM3//DGKH//FAM149B1 |
tRF-Leu-TAA-005 | tRF-5 | LeuTAA | ACCAGGATGGCCGAGT | C6orf201//TENM4//GSTT2B//GSTT2//AQP10//HDAC1//TMEM42//GCGR//MAN2B2//ARL2BP |
tRF-1:28-Lys-CTT-1-M4 | tRF-5 | LysCTT | N/A | N/A |
tRF-Lys-CTT-049 | tRF-5 | LysCTT | GCCCAGCTAGCTCAG | PRR14L//SMIM19//MYO15A//RHOD//WDR54//SWAP70//GDPGP1//MAG//CNTNAP1//MTA3 |
tsRNA-5006a | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGG | MYO15A//ZIC5//PRR14L//SIAH3//SPHK2//ZBTB46//ZDHHC3//SHISA4//UHRF1BP1L//SMIM19 |
tsRNA-5005b | tRF-5 | LysCTT;LysTTT | GCCCGGCTAGCTCAGTCGGTAGAGC | MYO15A//RPS6KA2//EBI3//RPS6KA1//ZDHHC3//UHRF1BP1L//FBXL12//ARHGAP20//PRPF40B//NMT1 |
tRF-19-LR6LQ62K | tRF-5 | LysTTT | CGCCCGGATAGCTCAGTCG | FAM234B//TSR3//RELT//FKBP2//ATP8B4//AP001453.3//VSIG10L//PPIL2//IQANK1//NCR3 |
tRF-21-LR6LQ6S8E | tRF-5 | LysTTT | CGCCCGGATAGCTCAGTCGGT | PDZD4//PPIL2//ARVCF//PLEKHG4//ATP8B4//TCEAL3//GIGYF1//KDM5C//IFIT1//RNF103-CHMP3 |
tRF-29-LR6LQ6S8V01D | tRF-5 | LysTTT | CGCCCGGATAGCTCAGTCGGTAGAGCATC | EBI3//FBN2//ARHGEF19//RPS6KA1//SEC24C//GASK1A//BDNF//GLG1//SLC11A1//RNF103-CHMP3 |
tRF-1:24-Phe-GAA-1-M3 | tRF-5 | PheGAA | N/A | N/A |
tRF-1:29-Pro-AGG-1-M6 | tRF-5 | ProAGG | N/A | N/A |
tsRNA-5011a | tRF-5 | ProAGG;ProTGG;ProCGG | GGCTCGTTGGTCTAG | BET1L//ANKRD10//PERP//MBTPS1//TNS1//SMIM23//VAC14//MATN3//MTCL1//SMARCB1 |
tRF-1:29-Pro-TGG-1 | tRF-5 | ProTGG | N/A | N/A |
tRF-1:16-SeC-TCA-1 | tRF-5 | SecTCA | GCCCGGATGATCCTCA | PPP1R3B//GLE1//VSIG10L//DIPK1B//ARMCX1//RPS29//MLPH//PAX5//ENY2//TENM4 |
tsRNA-5016b | tRF-5 | SerAGA | GTAGTCGTGGCCGAGTGGTTAAGG | PLEKHH3//ADAT3//DCBLD1//ARHGEF2//PRKCQ//L3HYPDH//IGSF9B//PSD//SUV39H1//GSC |
tRF-1:29-Thr-TGT-4-M2 | tRF-5 | ThrTGT | N/A | N/A |
tsRNA-5009b | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATC | SLC16A7//MRPL42//KCMF1//MDM4//RGS8//KCNK5//EARS2//TCP10//FNTB//CHURC1-FNTB |
tRF-Ala-AGC-036 | N/A | AlaAGC | GGGGATGTAGCTCA | JAG1//GPR84//TAF9//AK6//KNOP1//SH3BP4//WDR55//RRM2//PLEKHA2//GNA15 |
5P_tRNA-Arg-CCG-2-1 | N/A | ArgCCG | GAGAAGCCGGATCCTGTGGT | INTS1//SCUBE3//PLEC//GTF3C3//TLCD3B//RPL13//BTBD8//ANKEF1//ABCC11//UNC93B1 |
5P_tRNA-Asn-GTT-1-1 | N/A | AsnGTT | AGCCAAAATCGCCAACGCCC | PIGL//FANCC//MAGT1//RRAGC//KRT24//NUP133//REPS2//DNAJA1//POTEI//CLN3 |
5P_tRNA-Asn-GTT-2-6 | N/A | AsnGTT | GAGAAGCCGGATCCTGTGGT | INTS1//SCUBE3//PLEC//GTF3C3//TLCD3B//RPL13//BTBD8//ANKEF1//ABCC11//UNC93B1 |
tRF-Gly-GCC | N/A | GlyGCC | N/A | N/A |
tRF-Gly-GCC | N/A | GlyGCC | GACAATTCTACCAGTGAACCAGCCATGC | SH3PXD2A//DNASE2B//CHRNE//KCNN1//HRH1//HTR2B//PDGFRA//TSPOAP1//ATP5MC2//PCMTD1 |
5P_tRNA-Leu-TAG-3-1 | N/A | LeuTAG | N/A | N/A |
5P_tRNA-Phe-GAA-1-5 | N/A | PheGAA | CAGGAGACAACCCAGAACGT | AGTR2//ZIM3//KIAA1958//KCNH3//RPSA//FAN1//STAT4//CNTN2//NFIB//HYPK |
5P_tRNA-Ser-CGA-4-1 | N/A | SerCGA | N/A | N/A |
tsRNA-1009 | N/A | N/A | N/A | N/A |
tsRNA-1018 | N/A | N/A | N/A | N/A |
tsRNA-1020 | N/A | N/A | N/A | N/A |
tsRNA-1026 | N/A | N/A | N/A | N/A |