The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tRF-20-S998LO9D | tRF-5 | ArgTCT | GTCTCTGTGGCGCAATGGAC | GABRB3//ACVR2B//ALDH7A1//HES7//FBH1//PXYLP1//EFCAB5//SEPTIN1//VSIG10L2//TBC1D5 |
| tRF-20-6S7P4PWJ | tRF-5 | IleAAT | GGCCGGTTAGCTCAGTCGGC | GRWD1//PODNL1//PREX1//SRSF8//TNN//DTD1//KIFC2//CILP//CELA3B//RPL15 |
| tRF-19-Q99P9PJZ | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGT | SLC16A7//FAHD2A//FNTB//CHURC1-FNTB//SENP8//CERCAM//RGS8//KCNK5//NKX2-3//TCP10 |
| tRF-21-I8W47W1R0 | i-tRF | GluTTC | ATTGGTCGTGGTTGTAGTCCG | KLK1//CACNG8//ACE2//AC097625.2//GALK1//PLXNB3//MMP2//MUC5B//ACAD9//ERGIC2 |
| tRF-25-9M739P8WQ0 | i-tRF | GluTTC | TGGTCGTGGTTGTAGTCCGTGCGAG | ACAD9//CACNG8//CPAMD8//SLC30A1//SEPTIN4//RSPO2//FAM181B//TSNAXIP1//RREB1//PACS2 |
| tRF-30-PNR8YP9LON4V | 5'-tiRNA | GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1 |
| tiRNA-Lys-CTT-001 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCC | NFKBID//EBI3//RPS6KA2//JPH1//WDR54//MOB2//GULP1//SEC61A1//PES1//PLXNA1 |
| tiRNA-Lys-CTT-002 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTC | EBI3//NFKBID//CHTF18//JPH1//TNFRSF11A//PES1//MGAT1//POM121C//ALG14//STX18 |
| tiRNA-Val-CAC-001 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
| tRF-1001 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTATTT | GOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8 |
| 3'tRF-CAT1 | tRF-3 | AlaAGC | TCCCCAGTACCTCCACCA | SEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G |
| AS-tDR-000100 | tRF-3 | AlaAGC | N/A | N/A |
| AS-tDR-000102 | tRF-3 | AlaCGC | N/A | N/A |
| tRF-Gly-CCC-043 | tRF-3 | GlyCCC | TCGATTCCCGGGCGGCGCACCA | WDR55//EME2//HAAO//ABCB8//IGHV5-51//IGHV5-10-1//PAFAH1B3//KCTD1//ARHGAP45//IER3 |
| i-tRFle-AAT-019 | tRF-3 | IleAAT | TCCCCGTACGGGCCACCA | RNF39//HCLS1//LPCAT3//COL9A3//PRRC2B//NUTM2D//ALKAL2//DOK2//HLA-C//DNAH1 |
| tRF-Leu-CAG-002 | tRF-3 | LeuCAG | ATCCCACTCCTGACACCA | LRRC8E//PLN//C12orf45//HERC3//C6orf89//CHST10//EML1//TADA2A//DTWD1//FGF13 |
| tRF-60:76-Lys-CTT-1-M4 | tRF-3 | LysCTT | CCCCACGTTGGGCGCCA | PRX//CHKA//LARP7//OR52N5//PTTG1IP//ST18//SKI//RRAD//SLC1A5//TAF9 |
| tRF-Phe-GAA-001 | tRF-3 | PheGAA | TATATACCCGGGTTTCGGCACCA | NFATC3//NFE4//PKN3//LRP10//CSMD2//PHF20//TUBA4A//HAGHL//TNFSF12-TNFSF13//TNFSF13 |
| tRF-Pro-TGG-003 | tRF-3 | ProTGG | AGACTTTTTCTCTGACCA | RPL28//PHEX//TASOR2//TSC22D1//FLG//RNFT1//PRMT2//PRKAG3//MPRIP//PRKD1 |
| AS-tDR-005700 | tRF-3 | ValCAC | N/A | N/A |
| tRF-Val-TAC-023 | tRF-3 | ValTAC | AACTTACACTTAGG | KIF18A//AFG1L//FAM53C//TRANK1//SERPINB8//RNF144B//C21orf58//CRTC1//UBE2D2//OOSP4A |
| tRF-Gln-CTG-003 | tRF-5 | GlnCTG | GGTTCCATGGTGTAATGGTTAGCACTCTGG | NEFL//RASSF8//PDGFRB//FAM92B//NOP16//ATP13A2//TEX37//C10orf67//C19orf85//EIF4ENIF1 |
| tRF-Gly-CCC-007 | tRF-5 | GlyCCC | GCATTGGTGGTTCAGTGGTAGA | FCGR2A//PRELP//OR7C1//MUCL1//MRRF//PEG10//HSD17B4//OLFM3//DGKH//FAM149B1 |
| tRF-30-PNR8YP9LON4V | tRF-5 | GlyCCC;GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1 |
| tRF-30-XSXMSL73VL4Y | tRF-5 | HisGTG | TGCCGTGATCGTATAGTGGTTAGTACTCTG | SHF//OTUB2//FAM49B//RBMXL2//CXCL16//TEP1//COX7B//SEMA4G//SUSD5//LRP4 |
| tRF-His-GTG-009 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGT | SHF//EVPLL//ARHGAP25//SHANK2//DDB1//SUSD5//RBMXL2//FOXC1//OTUB2//AC010422.3 |
| tRF-Leu-AAG-002 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAG | MRPS2//SLC39A8//PTBP1//TP73//DIP2B//HAPLN2//TRIL//RNF139//RUNX1//TM9SF1 |
| AS-tDR-000882 | tRF-5 | LysCTT | N/A | N/A |
| tRF-1:30-Lys-CTT-1-M2 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGGG | EBI3//GPER1//RPS6KA2//EXOC3//ZDHHC3//TNRC18//SMOC2//NMT1//ADAM32//LRRTM1 |
| tRF-1:30-Lys-CTT-2-M2 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAG | RPS6KA2//POM121C//POMZP3//PES1//CFAP410//RHOD//RPS6KA1//PIK3CD//LGR6//DDR1 |
| tRF-28-PSQP4PW3FJD0 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATG | EBI3//RPS6KA2//RPS6KA1//RHOD//PIK3CD//ACAN//FBXL12//PRPF40B//B3GNT4//NMT1 |
| tRF-Lys-CTT-002 | tRF-5 | LysCTT | GCCCGGCTAGCTCAG | SIAH3//PANK4//LMOD1//PTDSS1//TTYH1//PRR14L//SMIM19//FAM167A//MYO15A//UNCX |
| tRF-Lys-TTT-003 | tRF-5 | LysTTT | GCCCGGATAGCTCAG | FAM234B//TSR3//CLEC4G//GLG1//HTR5A//GLDN//ARHGEF4//TCEAL3//TIAM1//STEAP2 |
| tRF-Pro-AGG-004 | tRF-5 | ProAGG;ProCGG;ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGC | KCNJ4//NOMO3//NOMO2//STAB2//BLMH//PTPRU//ZSWIM8//D2HGDH//MAN1C1//PRDM7 |
| tRF-SeC-TCA-001 | tRF-5 | SecTCA | GCCCGGATGATCCTC | PPP1R3B//GLE1//ARMCX1//VSIG10L//DIPK1B//MAP2K7//RPS29//PAX5//TENM4//HERPUD1 |
| tRF-Ser-GCT-005 | tRF-5 | SerGCT | GACGAGGTGGCCGA | CBFA2T3//AP1S2//RAP1GAP//BEST1//MYDGF//GREB1//KIAA0556//EGFR//NLGN2//NME3 |
| tRF-Thr-CGT-009 | tRF-5 | ThrCGT | GGCCCTGTAGCTCAG | RIPOR1//NET1//AIFM3//FAM114A2//CASC4//TNFSF13B//ZDHHC1//HSPA12B//SIRT7//WDR27 |
| tRF-Tyr-GTA-015 | tRF-5 | TyrGTA | CCTTCGATAGCTCAG | TMED3//SOX11//HIF1AN//HAP1//SRPK1//SYT5//LIN28A//ZMAT3//ZNF862//CHMP7 |
| AS-tDR-001130 | tRF-5 | ValCAC | N/A | N/A |
| tRF-1:28-Val-CAC-2 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTT | SREBF2//ZBED2//FNTB//CHURC1-FNTB//CASZ1//SCIN//STARD6//THOP1//PTPN14//TUBB |
| tRF-Val-TAC-010 | tRF-5 | ValTAC | GGTTCCATAGTGTAG | NEFL//XIRP1//ROS1//CTRC//METTL1//PTPRT//GIPR//CACNA2D1//MMACHC//LRRFIP1 |
| tRF-1:28-Val-CAC-2 | N/A | N/A | N/A | N/A |
| tRF-1001 | N/A | N/A | N/A | N/A |