The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tRF-20-S998LO9D | tRF-5 | ArgTCT | GTCTCTGTGGCGCAATGGAC | GABRB3//ACVR2B//ALDH7A1//HES7//FBH1//PXYLP1//EFCAB5//SEPTIN1//VSIG10L2//TBC1D5 |
| tRF-21-I8W47W1R0 | i-tRF | GluTTC | ATTGGTCGTGGTTGTAGTCCG | KLK1//CACNG8//ACE2//AC097625.2//GALK1//PLXNB3//MMP2//MUC5B//ACAD9//ERGIC2 |
| tRF-25-9M739P8WQ0 | i-tRF | GluTTC | TGGTCGTGGTTGTAGTCCGTGCGAG | ACAD9//CACNG8//CPAMD8//SLC30A1//SEPTIN4//RSPO2//FAM181B//TSNAXIP1//RREB1//PACS2 |
| tRF-28-OB1690PQR304 | tRF-5 | SerTGA | GAAAAAGTCATGGAGGCCATGGGGTTGG | STRN4//PGLYRP2//NCOR2//SSTR1//OMP//CCHCR1//ERGIC1//ANKRD54//AGBL5//ZNF592 |
| tiRNA-1:33-Gly-CCC-1 | 5'-tiRNA | GlyCCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTC | FCGR2A//SLC26A6//LPAR1//DPF1//ABLIM2//ERAS//ST3GAL2//COL6A5//ANAPC2//C10orf105 |
| tiRNA-1:33-Gly-GCC-1 | 5'-tiRNA | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTG | FCGR2A//B4GALNT4//ZNF513//CNTLN//TGIF2LX//TGIF2LY//DPF1//LPAR1//AATK//F2RL2 |
| tiRNA-1:33-Gly-GCC-2-M3 | 5'-tiRNA | GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG | FCGR2A//DPF1//ABLIM2//LPAR1//COL6A5//ERAS//SLC26A6//ST3GAL2//ZNF26//CACNA1E |
| tRF-30-PNR8YP9LON4V | 5'-tiRNA | GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1 |
| tiRNA-1:34-Lys-CTT-1-M2 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTC | EBI3//WDR54//BCL7C//GNA14//ZBTB17//CFAP410//GRK3//CFAP43//ZDHHC3//GPER1 |
| tiRNA-1:34-Lys-CTT-3 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCC | NFKBID//EBI3//RPS6KA2//JPH1//WDR54//MOB2//GULP1//SEC61A1//PES1//PLXNA1 |
| tiRNA-Lys-CTT-002 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTC | EBI3//NFKBID//CHTF18//JPH1//TNFRSF11A//PES1//MGAT1//POM121C//ALG14//STX18 |
| tiRNA-Val-CAC-001 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
| tRF-16-I8W47WB | i-tRF | GluTTC | ATTGGTCGTGGTTGTA | ADAMTSL2//ZFHX4//ING1//CHRNA10//PPFIA3//ACAD9//ACE2//AC097625.2//SLC39A9//GPCPD1 |
| tRF-17-VBY9PYJ | i-tRF | GlyGCC | TAGAATTCTCGCCTGCC | FCGR2A//CTBS//ZNF668//CENPB//SOX11//TMEM132B//NRP2//TRARG1//IQSEC2//IFI30 |
| tRF-18-JMRPFQDY | i-tRF | LysCTT | CAGTCGGTAGAGCATGGG | SLC6A9//PXDN//TSPAN11//PDE6B//FNDC1//NPHP4//ADH1B//NMT1//ADH1C//ADH1A |
| ts-55 | tRF-1 | CysGCA | CGGGTTTCTTTAAGTTT | DNAJC18//REPIN1//FAM83F//PPP1R13B//SPRY3//PHF20//PSMD1//NUCB1//UBE2L3//SPACA6 |
| ts-60 | tRF-1 | CysGCA | CTGTGCTCTGGAGTTT | RAB36//PTPN7//FAM49A//TAF6L//UNC80//ITLN1//SNX4//TMOD1//MROH2A//KLK8 |
| tRF-+1:T17-Ser-TGA-1 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTAT | GOLGA7B//CDK2AP2//ARHGAP20//ASS1//UBE2L3//UBE2L5//COG5//SYT8//NDUFB4//GINS3 |
| tRF-1001 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTATTT | GOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8 |
| 3'tRF-CAT1 | tRF-3 | AlaAGC | TCCCCAGTACCTCCACCA | SEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G |
| tRFdb-3003a | tRF-3 | CysGCA | TCCGGGTGCCCCCTCCA | VSX2//MAN1A1//PDGFC//POLR2H//FAM181B//JAKMIP1//C4orf50//PDZRN3//TSPY2//CLIC6 |
| tRFdb-3003b | tRF-3 | CysGCA | TCAAATCCGGGTGCCCCCTCCA | TSPY2//TSPY1//TSPY3//TSPY10//FAM181B//PDGFC//TSPY8//TSPY4//TSPY9P//PDZRN3 |
| tRF-Leu-CAG-002 | tRF-3 | LeuCAG | ATCCCACTCCTGACACCA | LRRC8E//PLN//C12orf45//HERC3//C6orf89//CHST10//EML1//TADA2A//DTWD1//FGF13 |
| tRF-17-88481D2 | tRF-3 | TyrGTA | TCCGGCTCGGAGGACCA | STMN3//CCDC106//C8orf58//EPN2//CLK3//NMRAL1//RNF32//OSCAR//ADAMTS10//PSTPIP1 |
| tRF-30-PNR8YP9LON4V | tRF-5 | GlyCCC;GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1 |
| tRF-1:31-His-GTG-1 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCG | SHF//ARHGAP25//EVPLL//SUSD5//OTUB2//RBMXL2//LHFPL6//FOXC1//PTPRN//ELK4 |
| tRF-30-XSXMSL73VL4Y | tRF-5 | HisGTG | TGCCGTGATCGTATAGTGGTTAGTACTCTG | SHF//OTUB2//FAM49B//RBMXL2//CXCL16//TEP1//COX7B//SEMA4G//SUSD5//LRP4 |
| tRF-Leu-AAG-002 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAG | MRPS2//SLC39A8//PTBP1//TP73//DIP2B//HAPLN2//TRIL//RNF139//RUNX1//TM9SF1 |
| tRF-28-PSQP4PW3FJD0 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATG | EBI3//RPS6KA2//RPS6KA1//RHOD//PIK3CD//ACAN//FBXL12//PRPF40B//B3GNT4//NMT1 |
| tRF-1:32-chrM.Lys-TTT | tRF-5 | LysTTT | CACTGTAAAGCTAACTTAGCATTAACCTTTTA | MGAT3//CSNK1D//AIG1//HAND2//MPRIP//SPN//APOL1//MAGEF1//GRIN2B//PGPEP1 |
| tRF-Pro-AGG-004 | tRF-5 | ProAGG;ProCGG;ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGC | KCNJ4//NOMO3//NOMO2//STAB2//BLMH//PTPRU//ZSWIM8//D2HGDH//MAN1C1//PRDM7 |
| tRF-1:22-chrM.Ser-GCT | tRF-5 | SerGCT | GAGAAAGCTCACAAGAACTGCT | PTPRZ1//C4orf33//GTPBP10//SLC24A4//SCGN//ZNF540//TBC1D19//DTX4//SYNPO2//ARIH1 |
| tRF-Thr-CGT-009 | tRF-5 | ThrCGT | GGCCCTGTAGCTCAG | RIPOR1//NET1//AIFM3//FAM114A2//CASC4//TNFSF13B//ZDHHC1//HSPA12B//SIRT7//WDR27 |
| tRF-1001 | N/A | N/A | N/A | N/A |