The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tRF-20-S998LO9D | tRF-5 | ArgTCT | GTCTCTGTGGCGCAATGGAC | GABRB3//ACVR2B//ALDH7A1//HES7//FBH1//PXYLP1//EFCAB5//SEPTIN1//VSIG10L2//TBC1D5 |
| tRF-25-9M739P8WQ0 | i-tRF | GluTTC | TGGTCGTGGTTGTAGTCCGTGCGAG | ACAD9//CACNG8//CPAMD8//SLC30A1//SEPTIN4//RSPO2//FAM181B//TSNAXIP1//RREB1//PACS2 |
| tRF-31-PER8YP9LON4VD | 5'-tiRNA | GluTTC | GCAATGGTGGTTCAGTGGTAGAATTCTCGCC | ABLIM2//C8orf82//PTCD3//DPF1//SAMHD1//LPAR1//SLC26A6//C9orf129//KPNA6//PLA2R1 |
| tRF-30-PNR8YP9LON4V | 5'-tiRNA | GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1 |
| tRF-33-P4R8YP9LON4VDP | 5'-tiRNA | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTG | FCGR2A//B4GALNT4//ZNF513//CNTLN//TGIF2LX//TGIF2LY//DPF1//LPAR1//AATK//F2RL2 |
| tiRNA-His-GTG-001 | 5'-tiRNA | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTG | SHF//EVPLL//AC010422.3//MAN2B1//ZNF497//MFGE8//SHANK2//ARHGAP25//DDB1//SUSD5 |
| tiRNA-Val-CAC-001 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
| tRF-31-PIR8YP9LON4VD | 5'-tiRNA | ValCAC;GlyCCC | GCACTGGTGGTTCAGTGGTAGAATTCTCGCC | LPAR1//ST3GAL2//ABLIM2//ERAS//C8orf82//ANAPC2//ZNF592//ZG16B//TTLL7//NTMT1 |
| tRF-20-M0NK5Y93 | i-tRF | ArgCCG | CGGAGCTGGGGATTGTGGGT | CDCP2//AL357673.1//MUC5B//TMEM150C//MUC12//C1orf159//SLC39A13//MAOA//MROH1//RILP |
| tRF-26-MI7O3B1NR8E | i-tRF | AsnGTT | CGGCTGTTAACCGAAAGGTTGGTGGT | PI4KB//SKOR2//PDE4DIP//KPNA6//ESPN//TRPM7//PTPRD//KIF13B//IFIT3//GFAP |
| tRF-1001 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTATTT | GOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8 |
| 3'tRF-CAT1 | tRF-3 | AlaAGC | TCCCCAGTACCTCCACCA | SEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G |
| AS-tDR-000100 | tRF-3 | AlaAGC | N/A | N/A |
| AS-tDR-000102 | tRF-3 | AlaCGC | N/A | N/A |
| tRF-His-GTG-012 | tRF-3 | HisGTG | TCGAATCCGAGTCACGGCACCA | CALB1//ERVFRD-1//MED20//MKRN2//STK11//HSD17B6//PRDM11//TMEM263//NYAP2//P3H3 |
| i-tRFle-AAT-019 | tRF-3 | IleAAT | TCCCCGTACGGGCCACCA | RNF39//HCLS1//LPCAT3//COL9A3//PRRC2B//NUTM2D//ALKAL2//DOK2//HLA-C//DNAH1 |
| tRF-Leu-CAG-002 | tRF-3 | LeuCAG | ATCCCACTCCTGACACCA | LRRC8E//PLN//C12orf45//HERC3//C6orf89//CHST10//EML1//TADA2A//DTWD1//FGF13 |
| AS-tDR-005700 | tRF-3 | ValCAC | N/A | N/A |
| tRF-Val-TAC-023 | tRF-3 | ValTAC | AACTTACACTTAGG | KIF18A//AFG1L//FAM53C//TRANK1//SERPINB8//RNF144B//C21orf58//CRTC1//UBE2D2//OOSP4A |
| tRF-Glu-TTC-007 | tRF-5 | GluTTC | TCCCACATGGTCTAGC | MRGBP//TSR3//USP31//CSNK1G1//SLC43A2//AC087632.2//NTRK3//MAZ//PPP1R26//AL359736.1 |
| tRF-Gly-CCC-007 | tRF-5 | GlyCCC | GCATTGGTGGTTCAGTGGTAGA | FCGR2A//PRELP//OR7C1//MUCL1//MRRF//PEG10//HSD17B4//OLFM3//DGKH//FAM149B1 |
| tRF-30-PNR8YP9LON4V | tRF-5 | GlyCCC;GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1 |
| tRF-30-XSXMSL73VL4Y | tRF-5 | HisGTG | TGCCGTGATCGTATAGTGGTTAGTACTCTG | SHF//OTUB2//FAM49B//RBMXL2//CXCL16//TEP1//COX7B//SEMA4G//SUSD5//LRP4 |
| tRF-His-GTG-009 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGT | SHF//EVPLL//ARHGAP25//SHANK2//DDB1//SUSD5//RBMXL2//FOXC1//OTUB2//AC010422.3 |
| i-tRFle-AAT-002 | tRF-5 | IleAAT | GGCCGGTTAGCTCAG | CLCNKA//SRSF8//CELSR2//PIEZO1//KIFC2//PHLDB1//CILP//SRP19//MFHAS1//ZNF175 |
| tRF-Leu-AAG-002 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAG | MRPS2//SLC39A8//PTBP1//TP73//DIP2B//HAPLN2//TRIL//RNF139//RUNX1//TM9SF1 |
| AS-tDR-000882 | tRF-5 | LysCTT | N/A | N/A |
| tRF-28-PSQP4PW3FJD0 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATG | EBI3//RPS6KA2//RPS6KA1//RHOD//PIK3CD//ACAN//FBXL12//PRPF40B//B3GNT4//NMT1 |
| tRF-Lys-CTT-002 | tRF-5 | LysCTT | GCCCGGCTAGCTCAG | SIAH3//PANK4//LMOD1//PTDSS1//TTYH1//PRR14L//SMIM19//FAM167A//MYO15A//UNCX |
| tRF-Lys-TTT-003 | tRF-5 | LysTTT | GCCCGGATAGCTCAG | FAM234B//TSR3//CLEC4G//GLG1//HTR5A//GLDN//ARHGEF4//TCEAL3//TIAM1//STEAP2 |
| tRF-Pro-AGG-004 | tRF-5 | ProAGG;ProCGG;ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGC | KCNJ4//NOMO3//NOMO2//STAB2//BLMH//PTPRU//ZSWIM8//D2HGDH//MAN1C1//PRDM7 |
| tRF-SeC-TCA-001 | tRF-5 | SecTCA | GCCCGGATGATCCTC | PPP1R3B//GLE1//ARMCX1//VSIG10L//DIPK1B//MAP2K7//RPS29//PAX5//TENM4//HERPUD1 |
| tRF-Ser-AGA-003 | tRF-5 | SerAGA | GTAGTCGTGGCCGAG | SOX1//POLI//PLEKHH3//ADAT3//ZFAND3//CREB3L1//USP28//CTBP2//ARAP1//LTBP2 |
| tRF-Thr-CGT-009 | tRF-5 | ThrCGT | GGCCCTGTAGCTCAG | RIPOR1//NET1//AIFM3//FAM114A2//CASC4//TNFSF13B//ZDHHC1//HSPA12B//SIRT7//WDR27 |
| tRF-Tyr-GTA-002 | tRF-5 | TyrGTA | CCTTCGATAGCTCAGC | HAP1//TMED3//SUPT6H//SLC49A4//TNS3//MUC5AC//AKT2//HIF1AN//SLC5A10//STRBP |
| tRF-Tyr-GTA-015 | tRF-5 | TyrGTA | CCTTCGATAGCTCAG | TMED3//SOX11//HIF1AN//HAP1//SRPK1//SYT5//LIN28A//ZMAT3//ZNF862//CHMP7 |
| tRF-Val-AAC-005 | tRF-5 | ValAAC | GTTTCCGTAGTGTAG | NLRC5//MYH6//ZNF521//CDX2//MYH3//CHRNB2//TIMM21//CEL//SLC23A2//CARM1 |
| AS-tDR-001130 | tRF-5 | ValCAC | N/A | N/A |
| tRF-23-Q99P9P9NDD | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATC | SLC16A7//MRPL42//KCMF1//MDM4//RGS8//KCNK5//EARS2//TCP10//FNTB//CHURC1-FNTB |
| tRF-Val-CAC-004 | tRF-5 | ValCAC | GCTTCTGTAGTGTAG | CENPF//EEA1//SLC16A7//OLIG2//SLC25A22//ESRP1//ZNF275//RABEP1//KIF16B//BARD1 |
| tRF-Val-TAC-010 | tRF-5 | ValTAC | GGTTCCATAGTGTAG | NEFL//XIRP1//ROS1//CTRC//METTL1//PTPRT//GIPR//CACNA2D1//MMACHC//LRRFIP1 |
| tRF-Gln-CTG | N/A | GlnCTG | N/A | N/A |
| tRF-Leu-AAG | N/A | LeuAAG | N/A | N/A |
| tRF-1001 | N/A | N/A | N/A | N/A |
| tRF-20-M0NK5Y93 | N/A | N/A | CGGAGCTGGGGATTGTGGGT | CDCP2//AL357673.1//MUC5B//TMEM150C//MUC12//C1orf159//SLC39A13//MAOA//MROH1//RILP |
| tRF-23-Q99P9P9NDD | N/A | N/A | GCTTCTGTAGTGTAGTGGTTATC | SLC16A7//MRPL42//KCMF1//MDM4//RGS8//KCNK5//EARS2//TCP10//FNTB//CHURC1-FNTB |
| tRF-33-P4R8YP9LON4VDP | N/A | N/A | GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTG | FCGR2A//B4GALNT4//ZNF513//CNTLN//TGIF2LX//TGIF2LY//DPF1//LPAR1//AATK//F2RL2 |