The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tiRNA-5GluCTC | 5'-tiRNA | GluCTC | N/A | N/A |
| tiRNA-Glu-CTC-001 | 5'-tiRNA | GluCTC | TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTC | TFCP2L1//PAQR4//EME2//TMEM69//RFTN1//TMEM92//CCDC159//PFKFB3//SLC25A48//TPCN2 |
| tiRNA-Glu-TTC-001 | 5'-tiRNA | GluTTC | TCCCACATGGTCTAGCGGTTAGGATTCCTGGTTT | SGMS2//PPP1R26//MOB3C//WSCD2//CLEC18A//CLEC18C//CLEC18B//ZNF654//DDX41//KIF1B |
| tiRNA-5′GlyGCC | 5'-tiRNA | GlyGCC | N/A | N/A |
| tiRNA-Gly-GCC-003 | 5'-tiRNA | GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG | FCGR2A//DPF1//ABLIM2//LPAR1//COL6A5//ERAS//SLC26A6//ST3GAL2//ZNF26//CACNA1E |
| tiRNA-Gly-TCC-002 | 5'-tiRNA | GlyTCC | GCGTTGGTGGTATAGTGGTTAGCATAGCTGCCTT | PHGDH//UHMK1//RPS6KA4//SYNPO2L//CD40//INPP5K//SUPT6H//MYO1D//FAM205A//MDM2 |
| 5'tiRNA‐His‐GTG | 5'-tiRNA | HisGTG | N/A | N/A |
| tiRNA-5HisGTG | 5'-tiRNA | HisGTG | N/A | N/A |
| tiRNA-His-GTG-001 | 5'-tiRNA | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTG | SHF//EVPLL//AC010422.3//MAN2B1//ZNF497//MFGE8//SHANK2//ARHGAP25//DDB1//SUSD5 |
| tiRNA-Lys-CTT-003 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTC | EBI3//WDR54//BCL7C//GNA14//ZBTB17//CFAP410//GRK3//CFAP43//ZDHHC3//GPER1 |
| tiRNA-Lys-TTT-002 | 5'-tiRNA | LysTTT | GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTT | EBI3//URM1//SEC24C//ARHGEF19//CD3D//TNFRSF11A//ALDOC//MMP21//NDUFA8//PFKP |
| tiRNA-Met-CAT-001 | 5'-tiRNA | MetCAT | N/A | N/A |
| tiRNA-Pro-CGG-001 | 5'-tiRNA | ProCGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTC | KCNJ4//HMGN2//STAB2//NOMO2//NOMO3//TRMT5//BLMH//GTF3C4//ASGR1//KEAP1 |
| tiRNA-1:20-chrM.Ser-GCT | 5'-tiRNA | SerGCT | N/A | N/A |
| tiRNA-Val-AAC-002 | 5'-tiRNA | ValAAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTA | ZBED2//CTNND2//CDYL2//SLC12A5//KIAA1549//HK2//CLSTN3//CELA2A//ACAP1//LRRN3 |
| tiRNA-5′ValCAC | 5'-tiRNA | ValCAC | N/A | N/A |
| tiRNA-Val-CAC-001 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
| tiRNA-Val-CAC-002 | 5'-tiRNA | ValCAC | GTTTCCGTAGTGTAGCGGTTATCACATTCGCCTC | PLEKHG5//CDYL2//KLK10//GPC6//GALNTL6//ILRUN//SOCS2//SNX1//TRERF1//CIAO3 |
| tiRNA-Val-CAC-003 | 5'-tiRNA | ValCAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//CTNND2//SLC12A5//CDYL2//KIAA1549//STK36//CELA2A//ACAP1//CDC25C//HK2 |
| tRF-Gly-TCC-034 | tRF-1 | GlyTCC | GCGGGCGGACCTTT | DOCK11//TEX35//ZSCAN1//NOP9//FAM193A//HR//UCP3//KIAA0513//ICE1//XIRP1 |
| tRF-Gly-TCC-035 | tRF-1 | GlyTCC | GCGGGCGGACCTTTT | DOCK11//ZSCAN1//TEX35//FAM193A//NOP9//HR//KIAA0513//RPP25//UCP3//ICE1 |
| tRF-His-GTG-047 | tRF-1 | HisGTG | ATGTCGTTAGTCTAGGCTGTCAGCTCTT | ALOXE3//IGHV1-24//IGHV1-69//IGHV1-69D//IGHV1OR15-1//AC135068.8//IGHV1-69-2//IGHV1-46//CXXC5//IGHV1-18 |
| tRF-+1:T24-Leu-AAG-1 | tRF-1 | LeuAAG | N/A | N/A |
| tRF-+1:T25-Leu-CAG-1-6 | tRF-1 | LeuCAG | ATATGTGTTTTCCGTCCTTACTTTT | PTPRG//ADGRL4//ENC1//PITPNA//RMDN3//SMARCB1//SLC8A3//CASC3//PHIP//BCL2L11 |
| tRF-1020 | tRF-1 | PheGAA | GAGAGCGCTCGGTTTTT | PLK2//NCAM1//JCAD//SLC22A23//PARS2//KLHL36//DPPA4//CD99//PAPPA//CXorf40B |
| tRF-Ser-GCT-033 | tRF-1 | SerGCT | GCTAAGGAAGTCCTGTGCTCAGTTTTG | AC013394.1//CHD2//C6orf89//SLC25A36//NAV2//PHF11//MAN2B2//OTX1//DPCD//TPP1 |
| tRF-Ser-TGA-010 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTATTTTTT | TPO//GOLGA7B//CDK2AP2//KSR1//ASS1//ARHGAP20//TMEM178A//DAPK2//NOTCH3//COX10 |
| tRF-Thr-CGT-019 | tRF-1 | ThrCGT | GAGACCCGAGGTAGGGCTTT | REEP4//C3orf20//HOXC12//ANKRD12//FAM214B//CES2//CBL//CST4//USP7//TIGD2 |
| tRF-Val-CAC-023 | tRF-1 | ValCAC | AAGTGGTTCCTGTT | TUT4//MSMO1//P2RX5-TAX1BP3//ST8SIA1//ZNF468//ZNF320//CYFIP1//UBQLN1//AQR//CCL28 |
| tRF-Glu-CTC-014 | tRF-2 | GluCTC | GCGCTCTCACCGCC | CD3EAP//BCS1L//CCNYL1//SPRTN//TOX4//PCOLCE2//PDGFD//POGK//CFL1//ZNF664 |
| tRF-56:75-Gln-CTG-2 | tRF-3 | GlnCTG | N/A | N/A |
| tRF-55:75-Gln-TTG-1-M2 | tRF-3 | GlnTTG | N/A | N/A |
| tRF-61:77-Ile-AAT-2-M3 | tRF-3 | IleAAT | N/A | N/A |
| tRF-3001a | tRF-3 | LeuAAG | ATCCCACCGCTGCCACCA | ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB |
| tRF-3001a | tRF-3 | LeuAAG;LeuTAG | ATCCCACCGCTGCCACCA | ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB |
| tRF-66:86-Leu-CAG-1 | tRF-3 | LeuCAG | N/A | N/A |
| tRF-68:86-Leu-CAG-1 | tRF-3 | LeuCAG | N/A | N/A |
| tRF-Phe-GAA-012 | tRF-3 | PheGAA | CATCACCCCATAAACACCA | ZNF630//AHNAK//TMEM8B//PKP3//FADS2//MOB3B//MED1//APEH//FBXO3//KRT1 |
| tRF-Ser-GCT-001 | tRF-3 | SerGCT | AACAACATGGCTTTCTCACCA | S100A7L2//AUTS2//SNX25//DYNC1LI2//CRIM1//SGSM3//AL022238.4//TENT5A//SGK1//PALD1 |
| tRF-56:77-Thr-AGT-3 | tRF-3 | ThrAGT | N/A | N/A |
| tRF-56:75-Thr-CGT-2-M2 | tRF-3 | ThrCGT | N/A | N/A |
| tRF-Trp-TCA-002 | tRF-3 | TrpTCA | AATACTTAATTTCTGCCA | NPIPB6//OR2V1//PPP6R3//SELL//NPIPB7//NIPBL//RBM7//AC138894.1//AKIRIN1//NPIPB9 |
| tRF-Trp-TCA-005 | tRF-3 | TrpTCA | ATACTTAATTTCTGCCA | NPIPB6//OR2V1//PPP6R3//NPIPB7//NIPBL//RBM7//SELL//CEP41//AC138894.1//ZMYM5 |
| tRF-58:76-Tyr-ATA-1 | tRF-3 | TyrATA | N/A | N/A |
| tRF-57:76-Tyr-GTA-1-M2 | tRF-3 | TyrGTA | N/A | N/A |
| tRF-Tyr-GTA-005 | tRF-3 | TyrGTA | TCCGGCTCGAAGGACCA | KLHDC4//GAD2//CHST3//CHD2//TMEM41A//IPO13//CCDC106//DUS2//NRROS//STMN3 |
| tRF-Tyr-GTA-007 | tRF-3 | TyrGTA | TTCCGGCTCGAAGGACCA | KLHDC4//GAD2//CHD2//TMEM41A//NRROS//CCDC106//IPO13//ATAD1//AP2A2//DUS2 |
| tRF-Tyr-GTA-010 | tRF-3 | TyrGTA | ATCCGGCTCGAAGGACCA | KLHDC4//GAD2//CHST3//CHD2//TMEM41A//CCDC106//NRROS//DUS2//IPO13//FAM135B |
| tRF-56:72-chrM.Val-TAC | tRF-3 | ValTAC | N/A | N/A |
| tRF-1:14-chrM.Ala-TGC | tRF-5 | AlaTGC | N/A | N/A |
| tRF-1:30-Gln-CTG-4 | tRF-5 | GlnCTG | GGTTCCATGGTGTAATGGTGAGCACTCTGG | NEFL//SNAPC2//XIRP1//RASSF8//FAM92B//HAGH//SLC26A1//MTSS1//CDH26//PDGFRB |
| tRF-Glu-CTC-017 | tRF-5 | GluCTC | TCCCTGGTGGTCTAGTGGTTAGGA | TFCP2L1//CHRNA1//TUBA1B//EME2//QSER1//SLC25A48//ARMCX4//RBM28//EHMT1//INSYN1 |
| tRF-1:28-Glu-TTC-2 | tRF-5 | GluTTC | N/A | N/A |
| tRF-Gly-CCC-009 | tRF-5 | GlyCCC | GCATTGGTGGTTCAGTGGTAGAAT | FCGR2A//OLFM3//OR7C1//MUCL1//PCGF5//HSD17B4//MRRF//PEG10//FAM149B1//SH3GLB1 |
| tRF-Gly-CCC-039 | tRF-5 | GlyCCC | GCGCCGCTGGTGTAGTGGTATCATGCAA | PTPRK//ZNF273//ESPN//SSH1//FKBP1A//STAG3//DMAP1//KMT2D//ZNF467//GATD1 |
| tRF-Gly-GCC-002 | tRF-5 | GlyGCC | GCATAGGTGGTTCAGTGGTAGAATTCTT | FCGR2A//SP3//NDUFAF1//SMIM3//PRELP//OLFM3//ALOXE3//SNRNP200//C9orf129//AGBL3 |
| tRF-Gly-GCC-008 | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCG | FCGR2A//POLR1A//SORCS1//HSD17B4//PPARGC1B//PTCD3//MRPS5//SP3//OTUB2//TNS2 |
| tRF-1:32-Gly-TCC-3 | tRF-5 | GlyTCC | N/A | N/A |
| tRF-Gly-TCC-013 | tRF-5 | GlyTCC | GCGTTGGTGGTATAGTGGTTAGCATAGCT | PHGDH//CSMD2//WNK4//ITPR1//SLC6A4//LRP1//B3GALT5//DLG1//SSPO//DTNA |
| tRF-1:16-Leu-TAA-1 | tRF-5 | LeuTAA | ACCAGGATGGCCGAGT | C6orf201//TENM4//GSTT2B//GSTT2//AQP10//HDAC1//TMEM42//GCGR//MAN2B2//ARL2BP |
| tRF-Leu-TAA-005 | tRF-5 | LeuTAA | ACCAGGATGGCCGAGT | C6orf201//TENM4//GSTT2B//GSTT2//AQP10//HDAC1//TMEM42//GCGR//MAN2B2//ARL2BP |
| tRF-Lys-CTT-006 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAG | RPS6KA2//POM121C//POMZP3//PES1//CFAP410//RHOD//RPS6KA1//PIK3CD//LGR6//DDR1 |
| tRF-Lys-CTT-007 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGA | RPS6KA2//PES1//POM121C//CFAP410//POMZP3//STX18//ALG14//DDR1//PIK3CD//INTS6 |
| tRF-Lys-CTT-037 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGG | EBI3//RPS6KA2//GPER1//EXOC3//ADAM32//NMT1//RHOD//ACAN//RPS6KA1//EHD2 |
| tRF-Lys-TTT-024 | tRF-5 | LysTTT | CACTGTAAAGCTAACT | ANK3//FAM91A1//SNX12//MELTF//HAND2//NCKIPSD//TTLL3//APOB//NDE1//FGF13 |
| tRF-Pro-AGG-006 | tRF-5 | ProAGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGCTT | KCNJ4//STAB2//NOMO2//NOMO3//BLMH//HMGN2//KEAP1//LEMD3//PRDM7//NOG |
| tRF-1:31-Ser-AGA-1-M6 | tRF-5 | SerAGA | N/A | N/A |
| tRF-1:22-chrM.Ser-GCT | tRF-5 | SerGCT | GAGAAAGCTCACAAGAACTGCT | PTPRZ1//C4orf33//GTPBP10//SLC24A4//SCGN//ZNF540//TBC1D19//DTX4//SYNPO2//ARIH1 |
| tRF-Ser-GCT-005 | tRF-5 | SerGCT | GACGAGGTGGCCGA | CBFA2T3//AP1S2//RAP1GAP//BEST1//MYDGF//GREB1//KIAA0556//EGFR//NLGN2//NME3 |
| tRF-Ser-TGA-011 | tRF-5 | SerTGA | GCAGCGATGGCCGAGT | RNF139//SLC14A2//C12orf43//CACNA1D//CACNA1A//FANCE//NXPE3//SNAI3//RHAG//KAZN |
| tRF-1:14-Tyr-GTA-1-M7 | tRF-5 | TyrGTA | CCTTCGATAGCTCA | SOX11//TMED3//SRPK1//ZMAT3//SYT5//ZNF862//HAP1//GDPD2//CHMP7//MYH10 |
| tRF-Val-AAC-009 | tRF-5 | ValAAC | GTTTCCGTAGTGTAGTGGTCATCACGTTCGCC | CTNND2//ZBED2//SLC12A5//HK2//CDYL2//KIAA1549//PGRMC2//RABGAP1//NLRC5//UNC5A |
| tRF-Val-AAC-014 | tRF-5 | ValAAC | GTTTCCGTAGTGTAGTGGTTATCACGTTC | ZBED2//CTNND2//SREBF2//TNFRSF10B//NEFL//LDLRAD1//FAM171A1//MYH6//ADAR//HK2 |
| tRF-Val-CAC-007 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTT | SREBF2//ZBED2//FNTB//CHURC1-FNTB//CASZ1//SCIN//STARD6//THOP1//PTPN14//TUBB |
| tRF-Arg-TCT-007 | N/A | ArgTCT | N/A | N/A |
| tRF-Cys-GCA-02 | N/A | CysGCA | N/A | N/A |
| tRF-Glu-CTC-016 | N/A | GluCTC | N/A | N/A |
| tRF-1-28-Glu-TTC-3-M2 | N/A | GluTTC | N/A | N/A |
| tRF-Gly-CCC-036 | N/A | GlyCCC | N/A | N/A |
| tiRNA-Gly-GCC | N/A | GlyGCC | N/A | N/A |
| tRF-Gly-GCC-002 | N/A | GlyGCC | N/A | N/A |
| tRF-1-31-His-GTG-1 | N/A | HisGTG | N/A | N/A |
| tRF-131-His-GTG-1 | N/A | HisGTG | N/A | N/A |
| tRF-Met-CAT-007 | N/A | MetCAT | N/A | N/A |
| tRF-Val-AAC-027 | N/A | ValAAC | N/A | N/A |
| miR-23b-3p | N/A | N/A | N/A | N/A |
| tiRNA-Val | N/A | N/A | N/A | N/A |
| tiRNA-Val-CAC-002 | N/A | N/A | N/A | N/A |
| tRF-1:30-Gln-CTG-4 | N/A | N/A | N/A | N/A |
| tRF-1020 | N/A | N/A | N/A | N/A |
| tRF-30 | N/A | N/A | N/A | N/A |