The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tiRNA-Arg-CCG-001 | 5'-tiRNA | ArgCCG | GACCCAGTGGCCTAATGGATAAGGCATCAGCCTC | OAZ3//NSMF//HPSE//SMG9//TTC30A//TMCC1//CIZ1//NAT10//SHC3//SEC31B |
| tiRNA-Gln-CTG-003 | 5'-tiRNA | GlnCTG | GGTTCCATGGTGTAATGGTTAGCACTCTGGACTC | NEFL//SLC25A48//DISC1//WDR66//RPL41//TSNAX-DISC1//FAM92B//C10orf67//EIF4ENIF1//GCNA |
| tiRNA-5GluCTC | 5'-tiRNA | GluCTC | N/A | N/A |
| tiRNA-Glu-CTC-001 | 5'-tiRNA | GluCTC | TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTC | TFCP2L1//PAQR4//EME2//TMEM69//RFTN1//TMEM92//CCDC159//PFKFB3//SLC25A48//TPCN2 |
| tiRNA-Glu-TTC-003 | 5'-tiRNA | GluTTC | TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGCTT | PAQR4//TMEM69//RFTN1//BAHCC1//DDX60//TFCP2L1//PHETA1//CHRNB4//SLC25A6//EME2 |
| tiRNA-5′GlyGCC | 5'-tiRNA | GlyGCC | N/A | N/A |
| tiRNA-5HisGTG | 5'-tiRNA | HisGTG | N/A | N/A |
| tiRNA-His-GTG-001 | 5'-tiRNA | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTG | SHF//EVPLL//AC010422.3//MAN2B1//ZNF497//MFGE8//SHANK2//ARHGAP25//DDB1//SUSD5 |
| tiRNA-Lys-CTT-001 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCC | NFKBID//EBI3//RPS6KA2//JPH1//WDR54//MOB2//GULP1//SEC61A1//PES1//PLXNA1 |
| tiRNA-Lys-CTT-002 | 5'-tiRNA | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTC | EBI3//NFKBID//CHTF18//JPH1//TNFRSF11A//PES1//MGAT1//POM121C//ALG14//STX18 |
| tiRNA-Lys-CTT-005 | 5'-tiRNA | LysCTT | GCCCAGCTAGCTCAGTCGGTAGAGCATGAGACTC | NFKBID//TNFRSF11A//EBI3//MGAT1//PES1//ALG14//JPH1//INTS6//KCNC4//TEX51 |
| tiRNA-Pro-CGG-001 | 5'-tiRNA | ProCGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTC | KCNJ4//HMGN2//STAB2//NOMO2//NOMO3//TRMT5//BLMH//GTF3C4//ASGR1//KEAP1 |
| tiRNA-1:20-chrM.Ser-GCT | 5'-tiRNA | SerGCT | N/A | N/A |
| tiRNA-Val-AAC-002 | 5'-tiRNA | ValAAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTA | ZBED2//CTNND2//CDYL2//SLC12A5//KIAA1549//HK2//CLSTN3//CELA2A//ACAP1//LRRN3 |
| tiRNA-5′ValCAC | 5'-tiRNA | ValCAC | N/A | N/A |
| tiRNA-Val-CAC-001 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
| tiRNA-Val-CAC-002 | 5'-tiRNA | ValCAC | GTTTCCGTAGTGTAGCGGTTATCACATTCGCCTC | PLEKHG5//CDYL2//KLK10//GPC6//GALNTL6//ILRUN//SOCS2//SNX1//TRERF1//CIAO3 |
| tiRNA-Val-CAC-003 | 5'-tiRNA | ValCAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//CTNND2//SLC12A5//CDYL2//KIAA1549//STK36//CELA2A//ACAP1//CDC25C//HK2 |
| tiRNA-Val-TAC-003 | 5'-tiRNA | ValTAC | GGTTCCATAGTGTAGTGGTTATCACATCTGCTTT | CAMK1D//ZNF281//CYP4F3//TEDC1//ZC3H15//TMBIM6//FMNL3//ANK3//CD86//CYP4F2 |
| mt-i-tRF-GluUUC | i-tRF | GluTTC | N/A | N/A |
| tRF-+1:T24-Leu-AAG-1 | tRF-1 | LeuAAG | N/A | N/A |
| tRF-Cys-GCA-004 | tRF-3 | CysGCA | TCCGGGTGCCCCCTCCA | VSX2//MAN1A1//PDGFC//POLR2H//FAM181B//JAKMIP1//C4orf50//PDZRN3//TSPY2//CLIC6 |
| tRF-56:75-Gln-CTG-2 | tRF-3 | GlnCTG | N/A | N/A |
| tRF-55:75-Gln-TTG-1-M2 | tRF-3 | GlnTTG | N/A | N/A |
| tRF-3001a | tRF-3 | LeuAAG | ATCCCACCGCTGCCACCA | ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB |
| tRF-3001a | tRF-3 | LeuAAG;LeuTAG | ATCCCACCGCTGCCACCA | ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB |
| tRF-Leu-CAG-002 | tRF-3 | LeuCAG | ATCCCACTCCTGACACCA | LRRC8E//PLN//C12orf45//HERC3//C6orf89//CHST10//EML1//TADA2A//DTWD1//FGF13 |
| tRF-Lys-TTT-012 | tRF-3 | LysTTT | AACACCTCTTTACAGTGACCA | KLK13//MTHFR//ITPRIPL1//TSPAN14//TNFAIP3//KNOP1//COPZ1//IQGAP2//EIF2B4//MOB3C |
| tRF-Phe-GAA-001 | tRF-3 | PheGAA | TATATACCCGGGTTTCGGCACCA | NFATC3//NFE4//PKN3//LRP10//CSMD2//PHF20//TUBA4A//HAGHL//TNFSF12-TNFSF13//TNFSF13 |
| tRF-56:77-Thr-AGT-3 | tRF-3 | ThrAGT | N/A | N/A |
| tRF-56:75-Thr-CGT-2-M2 | tRF-3 | ThrCGT | N/A | N/A |
| tRF-Trp-TCA-005 | tRF-3 | TrpTCA | ATACTTAATTTCTGCCA | NPIPB6//OR2V1//PPP6R3//NPIPB7//NIPBL//RBM7//SELL//CEP41//AC138894.1//ZMYM5 |
| tRF-Tyr-GTA-010 | tRF-3 | TyrGTA | ATCCGGCTCGAAGGACCA | KLHDC4//GAD2//CHST3//CHD2//TMEM41A//CCDC106//NRROS//DUS2//IPO13//FAM135B |
| tRF-18-BS68BFD2 | tRF-3 | ValAAC;ValCAC | AACCGGGCGGAAACACCA | STK32A//LTBP3//ITGB3BP//DENND6A//CDYL//HNRNPH1//DNAJC5//SH3BP5L//LYPLA1//LPO |
| tRF-25-R9ODMJ6B26 | tRF-3 | ValAAC;ValCAC | GGTTCGAAACCGGGCGGAAACACCA | HECTD4//LTBP3//MTURN//RMND5A//ESR1//STK32A//MYO1G//ERAP1//MOV10//GNG2 |
| tRF-38-QB1MK8YUBS68BFD2 | tRF-3 | ValAAC;ValCAC | GCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCA | FAM160B2//AKAP1//FANCM//GDF2//ITGB3BP//LRRC57//IL20RB//CORO1C//PCYT1A//PNPLA5 |
| tRF-56:72-chrM.Val-TAC | tRF-3 | ValTAC | N/A | N/A |
| tRF-1:14-chrM.Ala-TGC | tRF-5 | AlaTGC | N/A | N/A |
| tRF-Gln-CTG-003 | tRF-5 | GlnCTG | GGTTCCATGGTGTAATGGTTAGCACTCTGG | NEFL//RASSF8//PDGFRB//FAM92B//NOP16//ATP13A2//TEX37//C10orf67//C19orf85//EIF4ENIF1 |
| tRF-Glu-CTC-010 | tRF-5 | GluCTC | TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGC | TFCP2L1//EME2//SLC25A48//TMEM92//RFTN1//SLC25A6//PAQR4//CCDC159//PDE12//ALKBH2 |
| tRF-Glu-TTC-069 | tRF-5 | GluTTC | TCCCTGGTGGTCTAGTGGCTAGGATTCGG | TFCP2L1//NPY4R//NPY4R2//GALNT11//SLC25A6//UBE2J2//ALS2CL//PHETA1//MUC4//BAHCC1 |
| tRF-Gly-CCC-009 | tRF-5 | GlyCCC | GCATTGGTGGTTCAGTGGTAGAAT | FCGR2A//OLFM3//OR7C1//MUCL1//PCGF5//HSD17B4//MRRF//PEG10//FAM149B1//SH3GLB1 |
| tRF-Gly-CCC-039 | tRF-5 | GlyCCC | GCGCCGCTGGTGTAGTGGTATCATGCAA | PTPRK//ZNF273//ESPN//SSH1//FKBP1A//STAG3//DMAP1//KMT2D//ZNF467//GATD1 |
| tRF-Gly-GCC-008 | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGAATTCTCG | FCGR2A//POLR1A//SORCS1//HSD17B4//PPARGC1B//PTCD3//MRPS5//SP3//OTUB2//TNS2 |
| tRF-Gly-TCC-012 | tRF-5 | GlyTCC | GCGTTGGTGGTATAGTGGTTAGCATAGC | PHGDH//SLC6A4//LRP1//OTOG//WNK4//ZBED3//CSMD2//C3//B3GALT5//ITPR1 |
| tRF-Leu-AAG-002 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAG | MRPS2//SLC39A8//PTBP1//TP73//DIP2B//HAPLN2//TRIL//RNF139//RUNX1//TM9SF1 |
| tRF-Leu-AAG-003 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAGC | TP73//MRPS2//RUNX1//SLC39A8//ZMYM2//PTBP1//FBXL22//CDT1//HEXA//TRIL |
| tRF-Leu-AAG-004 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAGT | MRPS2//TP73//SLC39A8//RUNX1//PTBP1//TRIL//MRPS26//ZMYM2//GPT//RNF139 |
| tRF-1:16-Leu-TAA-1 | tRF-5 | LeuTAA | ACCAGGATGGCCGAGT | C6orf201//TENM4//GSTT2B//GSTT2//AQP10//HDAC1//TMEM42//GCGR//MAN2B2//ARL2BP |
| tRF-Leu-TAG-002 | tRF-5 | LeuTAG | GGTAGTGTGGCCGAGC | TP73//SORBS1//RUNX1//APOBEC3D//AL022318.4//MARCH4//MRPS2//AATK//SLC39A8//EDIL3 |
| tRF-Lys-TTT-011 | tRF-5 | LysTTT | GCCCGGATAGCTCAGTCGGTAGAGCATCAGAC | EBI3//URM1//RPS6KA1//GLG1//ARHGEF19//SEC24C//MMP21//PROM2//PFKP//GASK1A |
| tRF-Lys-TTT-024 | tRF-5 | LysTTT | CACTGTAAAGCTAACT | ANK3//FAM91A1//SNX12//MELTF//HAND2//NCKIPSD//TTLL3//APOB//NDE1//FGF13 |
| tRF-1:31-Ser-AGA-1-M6 | tRF-5 | SerAGA | N/A | N/A |
| tRF-1:22-chrM.Ser-GCT | tRF-5 | SerGCT | GAGAAAGCTCACAAGAACTGCT | PTPRZ1//C4orf33//GTPBP10//SLC24A4//SCGN//ZNF540//TBC1D19//DTX4//SYNPO2//ARIH1 |
| tRF-1:14-Tyr-GTA-1-M7 | tRF-5 | TyrGTA | CCTTCGATAGCTCA | SOX11//TMED3//SRPK1//ZMAT3//SYT5//ZNF862//HAP1//GDPD2//CHMP7//MYH10 |
| tRF-Tyr-GTA-131 | tRF-5 | TyrGTA | GGTAAAATGGCTGAGTGAAGCATTGGACTGTA | BACH1//ATXN2//TK2//LLGL1//PTGFR//NPAS3//BAIAP2L1//LRRK1//ACTG2//DCAF8 |
| tRF-Val-AAC-016 | tRF-5 | ValAAC | GTTTCCGTAGTGTAGTGGTTATCACGTTCGCC | CTNND2//ZBED2//SLC12A5//CLSTN3//HK2//KIAA1549//CDYL2//NLRC5//ACAP1//CLPB |
| tRF-Val-CAC-007 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTT | SREBF2//ZBED2//FNTB//CHURC1-FNTB//CASZ1//SCIN//STARD6//THOP1//PTPN14//TUBB |
| tRF-1-28-Glu-TTC-3-M2 | N/A | GluTTC | N/A | N/A |
| tRF-1-31-His-GTG-1 | N/A | HisGTG | N/A | N/A |
| tRF-131-His-GTG-1 | N/A | HisGTG | N/A | N/A |
| miR-23b-3p | N/A | N/A | N/A | N/A |
| tiRNA-Val-CAC-002 | N/A | N/A | N/A | N/A |
| tRF-18-BS68BFD2 | N/A | N/A | AACCGGGCGGAAACACCA | STK32A//LTBP3//ITGB3BP//DENND6A//CDYL//HNRNPH1//DNAJC5//SH3BP5L//LYPLA1//LPO |
| tRF-25-R9ODMJ6B26 | N/A | N/A | GGTTCGAAACCGGGCGGAAACACCA | HECTD4//LTBP3//MTURN//RMND5A//ESR1//STK32A//MYO1G//ERAP1//MOV10//GNG2 |
| tRF-38-QB1MK8YUBS68BFD2 | N/A | N/A | GCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCA | FAM160B2//AKAP1//FANCM//GDF2//ITGB3BP//LRRC57//IL20RB//CORO1C//PCYT1A//PNPLA5 |