Associated tsRNAs in Cartilage Diseases

tsRNA_NametsRNA_TypeAnticodonSequenceTarget_Gene
tRF-20-S998LO9DtRF-5ArgTCTGTCTCTGTGGCGCAATGGACGABRB3//ACVR2B//ALDH7A1//HES7//FBH1//PXYLP1//EFCAB5//SEPTIN1//VSIG10L2//TBC1D5
tRF-31-PER8YP9LON4VD5'-tiRNAGluTTCGCAATGGTGGTTCAGTGGTAGAATTCTCGCCABLIM2//C8orf82//PTCD3//DPF1//SAMHD1//LPAR1//SLC26A6//C9orf129//KPNA6//PLA2R1
tRF-33-86V8WPMN1E8Y0E5'-tiRNAGluTTCTCCCATATGGTCTAGCGGTTAGGATTCCTGGTTSGMS2//MOB3C//PPP1R26//CLEC18A//CLEC18C//CLEC18B//FRK//COL4A3//CCDC24//PAQR4
tRF-34-87R8WP9I1EWJIQ5'-tiRNAGluTTCTCCCTGGTGGTCTAGTGGCTAGGATTCGGCGCTTPAQR4//TMEM69//RFTN1//BAHCC1//DDX60//TFCP2L1//PHETA1//CHRNB4//SLC25A6//EME2
tiRNA-iMet-CAT-0015'-tiRNAiMetCATAGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCTBC1D5//SIRPB1//IFIH1//SRPX//LHX6//ZNF579//SETD4//SRRM2//ZFAND3//CCL14
tiRNA-Lys-CTT-0015'-tiRNALysCTTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCCNFKBID//EBI3//RPS6KA2//JPH1//WDR54//MOB2//GULP1//SEC61A1//PES1//PLXNA1
tRF-33-PSQP4PW3FJI0V5'-tiRNALysCTTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCNFKBID//EBI3//RPS6KA2//JPH1//PES1//POM121C//MGAT1//ALG14//STX18//POMZP3
tiRNA-Lys-TTT-0025'-tiRNALysTTTGCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTEBI3//URM1//SEC24C//ARHGEF19//CD3D//TNFRSF11A//ALDOC//MMP21//NDUFA8//PFKP
tiRNA-Val-CAC-0035'-tiRNAValCACGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTCZBED2//CTNND2//SLC12A5//CDYL2//KIAA1549//STK36//CELA2A//ACAP1//CDC25C//HK2
tRF-34-LZNL7L73V6M9I35'-tiRNAValCACCGCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTERAP1//ZBED2//CLPB//SLC12A5//HK2//NPTXR//CLASRP//OBSCN//MYO1G//ATG101
tRF-31-PIR8YP9LON4VD5'-tiRNAValCAC;GlyCCCGCACTGGTGGTTCAGTGGTAGAATTCTCGCCLPAR1//ST3GAL2//ABLIM2//ERAS//C8orf82//ANAPC2//ZNF592//ZG16B//TTLL7//NTMT1
tiRNA-Val-TAC-0045'-tiRNAValTACGGTTCCATAGTGTAGTGGTTATCACGTCTGCTTTCAMK1D//ZNF281//CYP4F3//SCAF1//TEDC1//ZC3H15//TMBIM6//SLC35B2//DSP//CAST
tRF-20-40KK5Y93i-tRFArgCCTCTAAGCCAGGGATTGTGGGTARNT2//RAB37//RIMS3//ERGIC1//GMPPA//MYO1G//ACSS1//TCP11L1//C10orf82//FLNA
tRF-28-D89NJ4S2I7DMi-tRFGluTTCAATGGTGGTTCAGTGGTAGAATTCTCGCFCGR2A//C9orf129//ZG16B//C8orf82//PCDH1//POLR3C//CNOT4//ABLIM2//PTCD3//ATE1
tRF-28-QSZ34KRQ590Ki-tRFProAGG;ProCGG;ProTGGGCTCGTTGGTCTAGGGGTATGATTCTCGNOMO3//NOMO2//PLXNB3//TNS1//KCNJ4//PTPRU//DVL2//TNFAIP3//NMNAT2//SCRIB
tRF-1001tRF-1SerTGAGAAGCGGGTGCTCTTATTTGOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8
tRF-1035tRF-1ThrCGTGATATCCAACCTTCGGCTATAGGGTGGAGACTTTTT PSG1//ADCK2//PLRG1//MAJIN//EFCAB2//MSH2//CELF3//FREM2//IZUMO4//MIEN1
tRF-27:42-Gly-GCC-1-M3tRF-2GlyGCCTCGCCTGCCACGCGGGFCGR2A//DNLZ//FAM83C//ABHD17C//SPTB//IL12RB2//TFAP2B//PRRC2A//LMNTD2//TRIOBP
3'tRF-CAT1tRF-3AlaAGCTCCCCAGTACCTCCACCASEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G
AS-tDR-000100tRF-3AlaAGCN/AN/A
tRF-22-8EKSP1852tRF-3AlaAGCTCAATCCCCGGCACCTCCACCANEO1//RBM27//FAM171A2//DCHS1//RAB43//ISY1-RAB43//IFI44L//SMTN//MEX3A//RETREG3
tRF-3003atRF-3AlaAGCTCCCCGGCACCTCCACCASEC14L1//RAB43//ISY1-RAB43//FAM171A2//SMTN//RIC3//RETREG3//EGLN3//DCHS1//PLXNB1
AS-tDR-000102tRF-3AlaCGCN/AN/A
tRF-3021tRF-3AlaCGC;AlaTGCTCCCCGGCATCTCCACCASEC14L1//PABPN1//RAB43//ISY1-RAB43//FAM171A2//SMTN//GLI2//RIC3//RETREG3//FRMPD4
tRF-57:75-Gln-CTG-2-M3tRF-3GlnCTGAGTCTCGGTGGAACCTCCAST3GAL4//TOR3A//PRDM1//MYO1C//SLC6A7//GPR149//FNDC11//ACOXL//STAG2//HEXIM1
tRF-Gln-CTG-005tRF-3GlnCTGTCTCGGTGGAACCTCCAST3GAL4//TOR3A//FNDC11//FNBP1//DCAKD//ORC1//CRTAP//SYNE2//FHAD1//TP53BP2
tRF-Glu-CTC-022tRF-3GluCTCN/AN/A
tRF-Glu-TTC-071tRF-3GluTTCN/AN/A
tRF-Gly-TCC-060tRF-3GlyTCCN/AN/A
i-tRFle-AAT-019tRF-3IleAATTCCCCGTACGGGCCACCARNF39//HCLS1//LPCAT3//COL9A3//PRRC2B//NUTM2D//ALKAL2//DOK2//HLA-C//DNAH1
tRF-65:86-Leu-CAA-1-M5tRF-3LeuCAATCGAATCCCACTTCTGACACCAPTCH1//PCYT2//ALDH1L1//CLSPN//RBM43//NGB//ZNF26//PLN//TAF8//TENM4
tRF-Leu-CAA-006tRF-3LeuCAATCCCACTTCTGACACCAACSBG1//ALDH1L1//ZC3H7B//FBXL19//ESRRA//NGB//PLN//INTS9//RBM43//ATN1
tRF-3009tRF-3LeuTAAACCCCACTCCTGGTACCAANKRD27//DTWD1//SHANK3//ELN//GDF6//CCDC88C//SLC39A13//ACE//ID4//AC011498.4
tRF-53:71-chrM.Pro-TGGtRF-3ProTGGAAGACTTTTTCTCTGACCARPL28//PHEX//TASOR2//TSC22D1//FLG//PRMT2//RNFT1//VCPIP1//MPRIP//PRKAG3
tRF-68:85-Ser-GCT-3-M4tRF-3SerGCTATCCCATCCTCGTCGCCASMAD6//ADAM10//BOP1//PPP2R5E//MZF1//ZEB2//ADRA2A//ELMSAN1//HECA//RASGRP2
tRF-68:85-Ser-TGA-4tRF-3SerTGAATCCTGTCGGCTACGCCACD320//GPSM1//DYRK3//HMCN2//FBXL14//TOR2A//MKS1//GALNT2//FANCC//ST3GAL2
tRF-Thr-AGT-003tRF-3ThrAGTN/AN/A
tRF-34-YKWIR959MIL0HVtRF-3TyrGTATTAGGTCGCTGGTTCGATTCCGGCTCGAAGGACCKLHDC4//PMPCA//DNMT3A//UBR2//WASF1//TMEM125//ADGRB2//PPP2R3B//ABCB9//RILPL1
tRF-57:76-Tyr-GTA-2-M2tRF-3TyrGTAGATTCCGGCTCGAAGGACCAKLHDC4//GAD2//ARHGAP33//REPIN1//PLEKHA8//ATAD1//TNR//DNMT3A//CCDC106//CHD2
tRF-Tyr-GTA-010tRF-3TyrGTAATCCGGCTCGAAGGACCAKLHDC4//GAD2//CHST3//CHD2//TMEM41A//CCDC106//NRROS//DUS2//IPO13//FAM135B
tRF-Tyr-GTA-011tRF-3TyrGTAATCCGGCTCGGAGGACCACCDC106//STMN3//CLK3//EPN2//C8orf58//TBX1//NMRAL1//RNF32//ADAMTS10//OSCAR
tRF-18-BS68BFD2tRF-3ValAAC;ValCACAACCGGGCGGAAACACCASTK32A//LTBP3//ITGB3BP//DENND6A//CDYL//HNRNPH1//DNAJC5//SH3BP5L//LYPLA1//LPO
tRF-25-R9ODMJ6B26tRF-3ValAAC;ValCACGGTTCGAAACCGGGCGGAAACACCAHECTD4//LTBP3//MTURN//RMND5A//ESR1//STK32A//MYO1G//ERAP1//MOV10//GNG2
tRF-38-QB1MK8YUBS68BFD2tRF-3ValAAC;ValCACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCAFAM160B2//AKAP1//FANCM//GDF2//ITGB3BP//LRRC57//IL20RB//CORO1C//PCYT1A//PNPLA5
AS-tDR-005700tRF-3ValCACN/AN/A
tRF-Ala-AGC-047tRF-5AlaAGCGGGGGTGTAGCTCAGTENAH//PIK3R2//MFSD2B//PRKDC//GPR84//DUSP10//SLC4A11//RHOD//CDK10//TRIM10
tRF-1:23-chrM.Ala-TGCtRF-5AlaTGCAAGGGCTTAGCTTAATTAAAGTGTFDP2//NTRK2//COMMD9//TSPAN6//PNPLA8//ADGRG4//NLRC3//ENSA//LRRN1//RHO
tRF-Gln-CTG-003tRF-5GlnCTGGGTTCCATGGTGTAATGGTTAGCACTCTGGNEFL//RASSF8//PDGFRB//FAM92B//NOP16//ATP13A2//TEX37//C10orf67//C19orf85//EIF4ENIF1
tRF-Glu-CTC-003tRF-5GluCTCTCCCTGGTGGTCTAGTSLC39A13//TFCP2L1//SMAD3//COL6A6//DAB2IP//NDOR1//QSER1//CC2D2A//MUC4//RP1
tRF-Glu-TTC-024tRF-5GluTTCTCCCTGGTGGTCTAGTGGCTAGGATTCGGCGSLC25A6//ESPL1//TFCP2L1//GALNT11//CLEC14A//NPY4R//NPY4R2//MYOZ1//UBE2J2//TRIM6-TRIM34
tRF-30-PNR8YO9LON4VtRF-5GlyCCCGCATTGGTGGTTCAATGGTAGAATTCTCGCFCGR2A//ANAPC2//LPAR1//ACAN//TSPAN18//SPARC//LRP1//SP100//OLFM3//AGBL3
tRF-Gly-CCC-005tRF-5GlyCCCGCATTGGTGGTTCAATGGTAGAATTCTCGCCTFCGR2A//LPAR1//ANAPC2//COL6A5//ACAN//ERAS//DPF1//AGBL3//SLC26A6//DNAH12
tRF-Gly-CCC-006tRF-5GlyCCCGCATTGGTGGTTCAGTERAS//FCGR2A//ZNF526//ADAR//RWDD1//TMEM131//LRP1//RC3H2//XYLT1//KCTD7
tRF-Gly-CCC-007tRF-5GlyCCCGCATTGGTGGTTCAGTGGTAGAFCGR2A//PRELP//OR7C1//MUCL1//MRRF//PEG10//HSD17B4//OLFM3//DGKH//FAM149B1
tRF-Gly-CCC-009tRF-5GlyCCCGCATTGGTGGTTCAGTGGTAGAATFCGR2A//OLFM3//OR7C1//MUCL1//PCGF5//HSD17B4//MRRF//PEG10//FAM149B1//SH3GLB1
tRF-1:28-His-GTG-1tRF-5HisGTGGCCGTGATCGTATAGTGGTTAGTACTCTSHF//OTUB2//RBMXL2//MUC5B//CXCL16//TEP1//DUSP10//AGAP2//LUZP1//TET2
tRF-32-XSXMSL73VL4YKtRF-5HisGTGTGCCGTGATCGTATAGTGGTTAGTACTCTGCGSHF//SUSD5//ARHGAP25//EVPLL//OTUB2//LHFPL6//RBMXL2//ELK4//PTPRN//ATF7IP2
tRF-His-GTG-006tRF-5HisGTGGCCGTGATCGTATAGTGGTTAGTACTCTGSHF//OTUB2//RBMXL2//FAM49B//TEP1//SEMA4G//CXCL16//OR13J1//ARID1A//COX7B
tRF-His-GTG-009tRF-5HisGTGGCCGTGATCGTATAGTGGTTAGTACTCTGCGTSHF//EVPLL//ARHGAP25//SHANK2//DDB1//SUSD5//RBMXL2//FOXC1//OTUB2//AC010422.3
tRF-iMet-CAT-003tRF-5iMetCATAGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCSIRPB1//LHX6//TBC1D5//SRPX//IFIH1//ZNF786//ADAM15//RNF183//TMEM255B//CACNG8
tRF-Leu-CAA-003tRF-5LeuCAAGTCAGGATGGCCGAGCGSTT2B//GSTT2//TENM4//PSAPL1//SEC13//C6orf201//NOP9//GPSM1//RNF225//TREX1
AS-tDR-000882tRF-5LysCTTN/AN/A
tRF-Lys-CTT-005tRF-5LysCTTGCCCGGCTAGCTCAGTCGGTAGAGCATGARPS6KA2//EBI3//RHOD//PIK3CD//RPS6KA1//ACAN//LGR6//GPER1//FBXL12//PRPF40B
tRF-Lys-CTT-007tRF-5LysCTTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGARPS6KA2//PES1//POM121C//CFAP410//POMZP3//STX18//ALG14//DDR1//PIK3CD//INTS6
tRF-Lys-CTT-008tRF-5LysCTTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACEBI3//RPS6KA2//NFKBID//PES1//POM121C//STX18//CFAP410//ALG14//POMZP3//INTS6
tRF-Lys-CTT-011tRF-5LysCTTGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACEBI3//ZDHHC3//ZBTB17//GPER1//SMOC2//GNA14//RPS6KA2//TNRC18//CFAP410//WDR54
tRF-Pro-AGG-006tRF-5ProAGGGGCTCGTTGGTCTAGGGGTATGATTCTCGCTTKCNJ4//STAB2//NOMO2//NOMO3//BLMH//HMGN2//KEAP1//LEMD3//PRDM7//NOG
tRF-Ser-AGA-002tRF-5SerAGAGTAGTCGTGGCCGAADAT3//ZFAND3//POLI//CTBP2//LTBP2//SOX1//COL1A2//ARAP1//POLD1//ZNF276
tRF-1:22-Val-AAC-1-M7tRF-5ValAACGTTTCCGTAGTGTAGTGGTTATCTNND2//HNRNPUL1//RGS8//ELMO3//ZBED2//NEFL//CEL//KRTAP19-8//MYH6//FAM171A1
AS-tDR-001130tRF-5ValCACN/AN/A
tRF-22-79MP9PMNItRF-5ValCACGTTTCCGTAGTGTAGCGGTTATHNRNPUL1//KLK10//ELMO3//BECN1//MYH3//TCP1//CEL//KIAA0319//MED31//PEPD
tRF-37-Q99P9P9NH57S362tRF-5ValCACGCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTCACAZBED2//ERAP1//SCN1A//OBSCN//TRIM22//GRIN2A//PLEKHG5//ABI3//NPTXR//SBF1
tRF-5009atRF-5ValCACGCTTCTGTAGTGTAGCENPF//EEA1//SLC16A7//OLIG2//SLC25A22//ESRP1//ZNF275//RABEP1//KIF16B//BARD1
Trnas-gcuN/AAlaAGCN/AN/A
TRNAR-ACGN/AArgACGN/AN/A
TRNAI-AAUN/AAsnATTN/AN/A
TRN-GTT9-1N/AAsnGTTN/AN/A
TRNAD-GUCN/AAspGTCN/AN/A
TRC-GCA7-1N/ACysGCAN/AN/A
TRNAA-UGCN/ACysGCAN/AN/A
tRF-Gln-CTG-001N/AGlnCTGN/AN/A
TRQ-CTG3-1N/AGlnCTGN/AN/A
n-TQttg6N/AGlnTTGN/AN/A
tiRNA-5031-GluCTC-1N/AGluCTCN/AN/A
tiRNA-5035-GluCTCN/AGluCTCN/AN/A
tRF-Gly-CCC-041N/AGlyCCCN/AN/A
tRF-Ile-AAT-019N/AIleAATN/AN/A
TRM-CAT4-3N/AMetCATN/AN/A
TRNAE-UUCN/APheGAAN/AN/A
TRNAF-GAAN/APheGAAN/AN/A
TRNAP-AGGN/AProAGGN/AN/A
TRNAR-CCUN/AProAGGN/AN/A
TRNAP-CGGN/AProCGGN/AN/A
TRNAT-AGUN/ASerACTN/AN/A
TRNAS-AGAN/ASerAGAN/AN/A
TRNAP-UGGN/ATrpCCAN/AN/A
TRNAV-AACN/AValAACN/AN/A
tDR-001271N/AN/AN/AN/A
tDR-001276N/AN/AN/AN/A
tDR-006049N/AN/AN/AN/A
tDR-006826N/AN/AN/AN/A
tRF-1001N/AN/AN/AN/A
tRF-18-BS68BFD2N/AN/AAACCGGGCGGAAACACCASTK32A//LTBP3//ITGB3BP//DENND6A//CDYL//HNRNPH1//DNAJC5//SH3BP5L//LYPLA1//LPO
tRF-18H9R8B7D2N/AN/AN/AN/A
tRF-25-R9ODMJ6B26N/AN/AGGTTCGAAACCGGGCGGAAACACCAHECTD4//LTBP3//MTURN//RMND5A//ESR1//STK32A//MYO1G//ERAP1//MOV10//GNG2
tRF-36-Q99P9-P9NH57S36DN/AN/AN/AN/A
tRF-38-QB1MK8YUBS68BFD2N/AN/AGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCAFAM160B2//AKAP1//FANCM//GDF2//ITGB3BP//LRRC57//IL20RB//CORO1C//PCYT1A//PNPLA5
tRF-His-GTG-006N/AN/AN/AN/A
TRNAY-GUAN/AN/AN/AN/A
tsRNA-08579N/AN/AN/AN/A
tsRNA-21109N/AN/AN/AN/A
tsRNA-22025N/AN/AN/AN/A