The tsRNA and Disease Database (version 1.0)
| tsRNA_Name | tsRNA_Type | Anticodon | Sequence | Target_Gene |
|---|---|---|---|---|
| tRF-20-S998LO9D | tRF-5 | ArgTCT | GTCTCTGTGGCGCAATGGAC | GABRB3//ACVR2B//ALDH7A1//HES7//FBH1//PXYLP1//EFCAB5//SEPTIN1//VSIG10L2//TBC1D5 |
| tRF-20-6S7P4PWJ | tRF-5 | IleAAT | GGCCGGTTAGCTCAGTCGGC | GRWD1//PODNL1//PREX1//SRSF8//TNN//DTD1//KIFC2//CILP//CELA3B//RPL15 |
| tRF-19-Q99P9PJZ | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGT | SLC16A7//FAHD2A//FNTB//CHURC1-FNTB//SENP8//CERCAM//RGS8//KCNK5//NKX2-3//TCP10 |
| tRF-21-I8W47W1R0 | i-tRF | GluTTC | ATTGGTCGTGGTTGTAGTCCG | KLK1//CACNG8//ACE2//AC097625.2//GALK1//PLXNB3//MMP2//MUC5B//ACAD9//ERGIC2 |
| tRF-25-9M739P8WQ0 | i-tRF | GluTTC | TGGTCGTGGTTGTAGTCCGTGCGAG | ACAD9//CACNG8//CPAMD8//SLC30A1//SEPTIN4//RSPO2//FAM181B//TSNAXIP1//RREB1//PACS2 |
| tRF-28-OB1690PQR304 | tRF-5 | SerTGA | GAAAAAGTCATGGAGGCCATGGGGTTGG | STRN4//PGLYRP2//NCOR2//SSTR1//OMP//CCHCR1//ERGIC1//ANKRD54//AGBL5//ZNF592 |
| tRF-34-V29K9UV36562FQ | 5'-tiRNA | GlnTTG | TAGGATGGGGTGTGATAGGTGGCACGGAGAATTT | NRXN2//VSIG10L//ZNF831//INTS6//ATP6V1FNB//PSMD2//PCNX1//BICRA//SLC22A12//ST8SIA2 |
| tRF-30-PNR8YP9LON4V | 5'-tiRNA | GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1 |
| tiRNA-His-GTG-001 | 5'-tiRNA | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTG | SHF//EVPLL//AC010422.3//MAN2B1//ZNF497//MFGE8//SHANK2//ARHGAP25//DDB1//SUSD5 |
| tRF-28-2YU04DYJIOD3 | 5'-tiRNA | LysTTT | CACTGTAAAGCTAACTTAGCATTAACCT | NAPEPLD//MGAT3//CSNK1D//MPRIP//DDHD1//RAB23//SLC2A10//SLC25A14//C1orf141//PPP1R3C |
| tRF-30-2YU04DYJIO3Z | 5'-tiRNA | LysTTT | CACTGTAAAGCTAACTTAGCATTAACCTTT | CSNK1D//MGAT3//NAPEPLD//MPRIP//MAGEF1//RAB23//IKZF5//SPN//AIG1//SLC25A14 |
| tiRNA-Val-CAC-001 | 5'-tiRNA | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGCCTC | ZBED2//ERAP1//PTPN14//OBSCN//NPTXR//CLASRP//NR1H3//AGRN//HK2//CDC25C |
| tRF-26-MI7O3B1NR8E | i-tRF | AsnGTT | CGGCTGTTAACCGAAAGGTTGGTGGT | PI4KB//SKOR2//PDE4DIP//KPNA6//ESPN//TRPM7//PTPRD//KIF13B//IFIT3//GFAP |
| tRF-33-RZYQHQ9M739P0J | i-tRF | GluTTC | GGTTTTTCATATCATTGGTCGTGGTTGTAGTCC | ZBTB39//NOP16//TMEFF1//MSANTD3-TMEFF1//ELOF1//ARHGAP42//STAB1//ANKRD54//LTN1//CAND2 |
| Gly-tRF | i-tRF | N/A | GCGAGAATTCTACCACTGAACCACCAATGC | PBX2//KRT1//BNIP1//ATP6AP2//CLCN6//SNX22//MYBPC3//DEXI//GPAT4//LAX1 |
| tRF-Pro-TGG-010 | tRF-1 | ProTGG | TCGTGGCTACTGTTTT | TRIM2//CLIC4//GLCCI1//HTR3A//ABCB4//GIP//GRIN2B//CORO1C//GREB1L//CDC40 |
| tRF-1001 | tRF-1 | SerTGA | GAAGCGGGTGCTCTTATTT | GOLGA7B//CDK2AP2//ARHGAP20//ASS1//NOTCH3//UBE2L3//UBE2L5//ANO9//COG5//SYT8 |
| 3'tRF-CAT1 | tRF-3 | AlaAGC | TCCCCAGTACCTCCACCA | SEC14L1//RIC3//GNPTAB//RETREG3//C6orf223//SNX33//KLF14//COLGALT1//PDE6C//SEMA3G |
| AS-tDR-000100 | tRF-3 | AlaAGC | N/A | N/A |
| AS-tDR-000102 | tRF-3 | AlaCGC | N/A | N/A |
| tRF-Gly-CCC-043 | tRF-3 | GlyCCC | TCGATTCCCGGGCGGCGCACCA | WDR55//EME2//HAAO//ABCB8//IGHV5-51//IGHV5-10-1//PAFAH1B3//KCTD1//ARHGAP45//IER3 |
| i-tRFle-AAT-019 | tRF-3 | IleAAT | TCCCCGTACGGGCCACCA | RNF39//HCLS1//LPCAT3//COL9A3//PRRC2B//NUTM2D//ALKAL2//DOK2//HLA-C//DNAH1 |
| tRF-3022a | tRF-3 | IleAAT | TCCCCGTACGGGCCACCA | RNF39//HCLS1//LPCAT3//COL9A3//PRRC2B//NUTM2D//ALKAL2//DOK2//HLA-C//DNAH1 |
| tRF-Leu-CAG-002 | tRF-3 | LeuCAG | ATCCCACTCCTGACACCA | LRRC8E//PLN//C12orf45//HERC3//C6orf89//CHST10//EML1//TADA2A//DTWD1//FGF13 |
| tRF-Pro-TGG-003 | tRF-3 | ProTGG | AGACTTTTTCTCTGACCA | RPL28//PHEX//TASOR2//TSC22D1//FLG//RNFT1//PRMT2//PRKAG3//MPRIP//PRKD1 |
| tRF_U3_1 | tRF-3 | SerTGA | N/A | N/A |
| AS-tDR-005700 | tRF-3 | ValCAC | N/A | N/A |
| tRF-18-BS6PDFD2 | tRF-3 | ValCAC | AACCGGGCAGAAGCACCA | MUC6//PCSK5//STK32A//ERO1A//PDE8B//CDC73//NFATC3//MMS19//SFXN3//AFF2 |
| tRF-Val-TAC-023 | tRF-3 | ValTAC | AACTTACACTTAGG | KIF18A//AFG1L//FAM53C//TRANK1//SERPINB8//RNF144B//C21orf58//CRTC1//UBE2D2//OOSP4A |
| tRF-Gln-TTG-006 | tRF-5 | GlnTTG | TAGGATGGGGTGTGATAGGTGG | PCNX1//HSPA1L//YLPM1//VSIG10L//GABRA6//KRBA1//TRAK1//KMT2D//ADGRA1//CCN3 |
| tRF-29-86V8WPMN1EJ3 | tRF-5 | GluTTC | TCCCATATGGTCTAGCGGTTAGGATTCCT | PPP1R26//CYB561A3//ZNF654//CLEC18A//CLEC18C//CLEC18B//SGMS2//COLGALT1//NAALADL1//EPHB6 |
| tRF-Gly-CCC-007 | tRF-5 | GlyCCC | GCATTGGTGGTTCAGTGGTAGA | FCGR2A//PRELP//OR7C1//MUCL1//MRRF//PEG10//HSD17B4//OLFM3//DGKH//FAM149B1 |
| tRF-30-PNR8YP9LON4V | tRF-5 | GlyCCC;GlyGCC | GCATTGGTGGTTCAGTGGTAGAATTCTCGC | FCGR2A//ZG16B//ANAPC2//LPAR1//CLIP1//ZNF592//C9orf129//DPF1//ACAN//PLA2R1 |
| tRF-5003b | tRF-5 | GlyGCC | GCATGGGTGGTTCAGTGGTAGA | FCGR2A//HSD17B4//SORCS1//TNS2//DDI1//CDCP2//AL357673.1//EIF3G//MRPS5//CDC16 |
| tRF-30-XSXMSL73VL4Y | tRF-5 | HisGTG | TGCCGTGATCGTATAGTGGTTAGTACTCTG | SHF//OTUB2//FAM49B//RBMXL2//CXCL16//TEP1//COX7B//SEMA4G//SUSD5//LRP4 |
| tRF-His-GTG-009 | tRF-5 | HisGTG | GCCGTGATCGTATAGTGGTTAGTACTCTGCGT | SHF//EVPLL//ARHGAP25//SHANK2//DDB1//SUSD5//RBMXL2//FOXC1//OTUB2//AC010422.3 |
| tRF-Leu-AAG-002 | tRF-5 | LeuAAG | GGTAGCGTGGCCGAG | MRPS2//SLC39A8//PTBP1//TP73//DIP2B//HAPLN2//TRIL//RNF139//RUNX1//TM9SF1 |
| tRF-Leu-TAA-017 | tRF-5 | LeuTAA | ACCAGAATGGCCGAG | ST6GALNAC2//RNF225//ARL2BP//ZNF514//ERC1//CFAP97D2//SMAD3//TJP1//MTURN//EPPK1 |
| AS-tDR-000882 | tRF-5 | LysCTT | N/A | N/A |
| tRF-28-PSQP4PW3FJD0 | tRF-5 | LysCTT | GCCCGGCTAGCTCAGTCGGTAGAGCATG | EBI3//RPS6KA2//RPS6KA1//RHOD//PIK3CD//ACAN//FBXL12//PRPF40B//B3GNT4//NMT1 |
| tRF-23-2YU04DYJDE | tRF-5 | LysTTT | CACTGTAAAGCTAACTTAGCATT | MGAT3//RNF112//EIF5A2//TTLL3//SNX12//MPRIP//CYP2S1//CCSER1//LRMDA//DTWD1 |
| tRF-Pro-AGG-002 | tRF-5 | ProAGG;ProCGG;ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTC | NOMO3//PTPRU//NOMO2//STAB2//PLXNB3//OR2M3//ZSWIM8//D2HGDH//XIRP1//MAN1C1 |
| tRF-Pro-AGG-004 | tRF-5 | ProAGG;ProCGG;ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGC | KCNJ4//NOMO3//NOMO2//STAB2//BLMH//PTPRU//ZSWIM8//D2HGDH//MAN1C1//PRDM7 |
| tRF-Pro-AGG-005 | tRF-5 | ProAGG;ProCGG;ProTGG | GGCTCGTTGGTCTAGGGGTATGATTCTCGCT | KCNJ4//STAB2//NOMO3//NOMO2//BLMH//HMGN2//PRDM7//LEMD3//KEAP1//ZSWIM8 |
| tRF-SeC-TCA-001 | tRF-5 | SecTCA | GCCCGGATGATCCTC | PPP1R3B//GLE1//ARMCX1//VSIG10L//DIPK1B//MAP2K7//RPS29//PAX5//TENM4//HERPUD1 |
| tRF-Ser-GCT-005 | tRF-5 | SerGCT | GACGAGGTGGCCGA | CBFA2T3//AP1S2//RAP1GAP//BEST1//MYDGF//GREB1//KIAA0556//EGFR//NLGN2//NME3 |
| tRF-Ser-GCT-024 | tRF-5 | SerGCT | GACGAGGTGGCCGAG | RAP1GAP//CBFA2T3//AP1S2//ATP5F1D//KIAA0556//GPS1//RNF130//PRDM13//MYDGF//BEST1 |
| tRF-Thr-CGT-009 | tRF-5 | ThrCGT | GGCCCTGTAGCTCAG | RIPOR1//NET1//AIFM3//FAM114A2//CASC4//TNFSF13B//ZDHHC1//HSPA12B//SIRT7//WDR27 |
| tRF-Val-AAC-004 | tRF-5 | ValAAC | GTTTCCGTAGTGTA | MYH6//MYH3//KLK10//CDX2//GPRC5A//TIMM21//RNF149//CARM1//TMEM104//HELZ2 |
| AS-tDR-001130 | tRF-5 | ValCAC | N/A | N/A |
| tRF-1:28-Val-CAC-2 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTT | SREBF2//ZBED2//FNTB//CHURC1-FNTB//CASZ1//SCIN//STARD6//THOP1//PTPN14//TUBB |
| tRF-23-Q99P9P9NDD | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATC | SLC16A7//MRPL42//KCMF1//MDM4//RGS8//KCNK5//EARS2//TCP10//FNTB//CHURC1-FNTB |
| tRF-Val-CAC-005 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATC | SLC16A7//MRPL42//KCMF1//MDM4//RGS8//KCNK5//EARS2//TCP10//FNTB//CHURC1-FNTB |
| tRF-Val-CAC-010 | tRF-5 | ValCAC | GCTTCTGTAGTGTAGTGGTTATCACGTTCGC | SREBF2//PTPN14//CLASRP//CASZ1//G6PC3//ERAP1//YAF2//SFT2D3//PELP1//HSPA6 |
| tRF-Gln-CTG | N/A | GlnCTG | N/A | N/A |
| tRF HCETSR | N/A | GluTTC | N/A | N/A |
| tRF-Leu-AAG | N/A | LeuAAG | N/A | N/A |
| tRF-3Thr-CGT | N/A | ThrCGT | N/A | N/A |
| tiRNA-Gly-GCC-002 | N/A | N/A | N/A | N/A |
| TiRNA-Gly-GCC-002 | N/A | N/A | N/A | N/A |
| tRF-1:28-Val-CAC-2 | N/A | N/A | N/A | N/A |
| tRF-1001 | N/A | N/A | N/A | N/A |
| tRF-23-Q99P9P9NDD | N/A | N/A | GCTTCTGTAGTGTAGTGGTTATC | SLC16A7//MRPL42//KCMF1//MDM4//RGS8//KCNK5//EARS2//TCP10//FNTB//CHURC1-FNTB |
| tRF-33-RZYQHQ9M739P0J | N/A | N/A | GGTTTTTCATATCATTGGTCGTGGTTGTAGTCC | ZBTB39//NOP16//TMEFF1//MSANTD3-TMEFF1//ELOF1//ARHGAP42//STAB1//ANKRD54//LTN1//CAND2 |
| tRF-34-P4R8YP9LON4VHM | N/A | N/A | GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTGC | FCGR2A//AATK//ZNF513//CNTLN//DPF1//TGM3//AL121899.2//F2RL2//LPAR1//TGIF2LX |
| tRF-Val-CAC-010 | N/A | N/A | N/A | N/A |
| tsRNA-Asp-5-0002 | N/A | N/A | N/A | N/A |
| tsRNA-Thr-5-0015 | N/A | N/A | N/A | N/A |