Entry Detail



General Information

Database ID:TRD09200
Confidence:Prediction
Confidence Score:0.01 (L1-norm-Graph) & 0.04 (WBNPMD)
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics



tsRNA Information

tsRNA Name:tRNA-ValCAC
tsRNA Type:tRF-5
Amino acid and Anticodon:ValCAC
Sequence:GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT
Related Target:PRKCB;CEL;EARS2;SLC23A2
Predicted Target:CTNND2//ZBED2//SLC12A5//CDYL2//KIAA1549//HK2//NMT1//CELA2A//ACAP1//GPC6
External Links:
MINTbase ID:tRF-33-79MP9P9NH57SD3
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Val-AAC-4-1
Anticodon:ValAAC
tRNA_number:trna136
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27648925        End Site(bp): 27648957

[2] gtRNAdb_ID:tRNA-Val-AAC-3-1
Anticodon:ValAAC
tRNA_number:trna139
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27618747        End Site(bp): 27618779

[3] gtRNAdb_ID:tRNA-Val-AAC-1-1
Anticodon:ValAAC
tRNA_number:trna2
Chromosome:3
Strand:+
Coordinate:Start Site(bp): 169490018        End Site(bp): 169490050

[4] gtRNAdb_ID:tRNA-Val-AAC-1-4
Anticodon:ValAAC
tRNA_number:trna12
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180645310        End Site(bp): 180645342

[5] gtRNAdb_ID:tRNA-Val-AAC-1-2
Anticodon:ValAAC
tRNA_number:trna4
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180591154        End Site(bp): 180591186

[6] gtRNAdb_ID:tRNA-Val-AAC-1-3
Anticodon:ValAAC
tRNA_number:trna5
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180596610        End Site(bp): 180596642

[7] gtRNAdb_ID:tRNA-Val-AAC-1-5
Anticodon:ValAAC
tRNA_number:trna132
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27721219        End Site(bp): 27721251

[8] gtRNAdb_ID:tRNA-Val-CAC-5-1
Anticodon:ValCAC
tRNA_number:trna90
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149684129        End Site(bp): 149684161

[9] gtRNAdb_ID:tRNA-Val-CAC-4-1
Anticodon:ValCAC
tRNA_number:trna98
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149298595        End Site(bp): 149298627

[10] gtRNAdb_ID:tRNA-Val-CAC-1-1
Anticodon:ValCAC
tRNA_number:trna85
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161369530        End Site(bp): 161369562

[11] gtRNAdb_ID:tRNA-Val-CAC-1-5
Anticodon:ValCAC
tRNA_number:trna10
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180649435        End Site(bp): 180649467

[12] gtRNAdb_ID:tRNA-Val-CAC-1-3
Anticodon:ValCAC
tRNA_number:trna18
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180529293        End Site(bp): 180529325

[13] gtRNAdb_ID:tRNA-Val-CAC-1-2
Anticodon:ValCAC
tRNA_number:trna2
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180524070        End Site(bp): 180524102

[14] gtRNAdb_ID:tRNA-Val-CAC-1-4
Anticodon:ValCAC
tRNA_number:trna6
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180600650        End Site(bp): 180600682

[15] gtRNAdb_ID:tRNA-Val-CAC-1-6
Anticodon:ValCAC
tRNA_number:trna9
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26538282        End Site(bp): 26538314



tsRNA Association Statistics

Total Associated Disease Number:4
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D003586DOID:0080827
Disease Name:Cytomegalovirus Infectionshuman cytomegalovirus infection
Category:MeSHDisease Ontology
Type:Infectionsdisease by infectious agent
Define:Infection with CYTOMEGALOVIRUS, characterized by enlarged cells bearing intranuclear inclusions. Infection may be in almost any organ, but the salivary glands are the most common site in children, as are the lungs in adults.A viral infectious disease that has_material_basis_in Human betaherpesvirus 5.
Alias:CMV Inclusion//CMV Inclusions//Congenital CMV Infection//Congenital Cytomegalovirus Infection//Cytomegalic Inclusion Disease//Cytomegalovirus Colitis//Cytomegalovirus Inclusion//Cytomegalovirus Inclusion Disease//Cytomegalovirus Inclusions//Inclusion Disease//Infections, Cytomegalovirus//Perinatal CMV Infection//Perinatal Cytomegalovirus Infection//Renal Tubular Cytomegalovirus Inclusion//Renal Tubular Cytomegalovirus Inclusions//Salivary Gland Virus Disease//Severe Cytomegalovirus Infection//Severe Cytomegalovirus InfectionsN/A



Disease Association Statistics

Total Associated tsRNA Number:39
More Information
Network:
(Display the first 15 nodes)