Entry Detail



General Information

Database ID:TRD08865
Confidence:Prediction
Confidence Score:0.01 (L1-norm-Graph) & 0.08 (WBNPMD)
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics



tsRNA Information

tsRNA Name:AS-tDR-001008
tsRNA Type:tRF-5
Amino acid and Anticodon:ProAGG;ProCGG;ProTGG
Sequence:GGCTCGTTGGTCTAGGGGTATGATTCT
Related Target:Slain1; Rac1
Predicted Target:PTPRU//PLXNB3//NOMO3//NOMO2//STAB2//ACTA1//PCDHGA7//TMEM72//KDM5B//PRDM7
External Links:
MINTbase ID:tRF-27-6978WPRLXN3
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Pro-AGG-2-1
Anticodon:ProAGG
tRNA_number:trna65
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 167684770        End Site(bp): 167684796

[2] gtRNAdb_ID:tRNA-Pro-AGG-2-4
Anticodon:ProAGG
tRNA_number:trna9
Chromosome:11
Strand:+
Coordinate:Start Site(bp): 75946557        End Site(bp): 75946583

[3] gtRNAdb_ID:tRNA-Pro-AGG-2-6
Anticodon:ProAGG
tRNA_number:trna22
Chromosome:14
Strand:-
Coordinate:Start Site(bp): 21081605        End Site(bp): 21081631

[4] gtRNAdb_ID:tRNA-Pro-AGG-2-5
Anticodon:ProAGG
tRNA_number:trna23
Chromosome:14
Strand:-
Coordinate:Start Site(bp): 21077540        End Site(bp): 21077566

[5] gtRNAdb_ID:tRNA-Pro-AGG-2-7
Anticodon:ProAGG
tRNA_number:trna29
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 3232680        End Site(bp): 3232706

[6] gtRNAdb_ID:tRNA-Pro-AGG-2-8
Anticodon:ProAGG
tRNA_number:trna9
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3239634        End Site(bp): 3239660

[7] gtRNAdb_ID:tRNA-Pro-AGG-2-2
Anticodon:ProAGG
tRNA_number:trna12
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26555498        End Site(bp): 26555524

[8] gtRNAdb_ID:tRNA-Pro-AGG-2-3
Anticodon:ProAGG
tRNA_number:trna2
Chromosome:7
Strand:+
Coordinate:Start Site(bp): 128423504        End Site(bp): 128423530

[9] gtRNAdb_ID:tRNA-Pro-AGG-1-1
Anticodon:ProAGG
tRNA_number:trna11
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3241989        End Site(bp): 3242015

[10] gtRNAdb_ID:tRNA-Pro-CGG-2-1
Anticodon:ProCGG
tRNA_number:trna30
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27059521        End Site(bp): 27059547

[11] gtRNAdb_ID:tRNA-Pro-CGG-1-1
Anticodon:ProCGG
tRNA_number:trna52
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 167683962        End Site(bp): 167683988

[12] gtRNAdb_ID:tRNA-Pro-CGG-1-2
Anticodon:ProCGG
tRNA_number:trna6
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3222049        End Site(bp): 3222075

[13] gtRNAdb_ID:tRNA-Pro-CGG-1-3
Anticodon:ProCGG
tRNA_number:trna37
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 8126196        End Site(bp): 8126222

[14] gtRNAdb_ID:tRNA-Pro-TGG-3-2
Anticodon:ProTGG
tRNA_number:trna6
Chromosome:14
Strand:+
Coordinate:Start Site(bp): 21152175        End Site(bp): 21152201

[15] gtRNAdb_ID:tRNA-Pro-TGG-3-4
Anticodon:ProTGG
tRNA_number:trna28
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 3234178        End Site(bp): 3234204

[16] gtRNAdb_ID:tRNA-Pro-TGG-3-3
Anticodon:ProTGG
tRNA_number:trna3
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3208923        End Site(bp): 3208949

[17] gtRNAdb_ID:tRNA-Pro-TGG-3-5
Anticodon:ProTGG
tRNA_number:trna8
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3238094        End Site(bp): 3238120

[18] gtRNAdb_ID:tRNA-Pro-TGG-3-1
Anticodon:ProTGG
tRNA_number:trna14
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180615899        End Site(bp): 180615925

[19] gtRNAdb_ID:tRNA-Pro-TGG-2-1
Anticodon:ProTGG
tRNA_number:trna12
Chromosome:11
Strand:-
Coordinate:Start Site(bp): 75946914        End Site(bp): 75946940



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D005923DOID:1312
Disease Name:Glomerulosclerosis, Focal Segmentalfocal segmental glomerulosclerosis
Category:MeSHDisease Ontology
Type:Urogenital Diseasesdisease of anatomical entity
Define:A clinicopathological syndrome or diagnostic term for a type of glomerular injury that has multiple causes, primary or secondary. Clinical features include PROTEINURIA, reduced GLOMERULAR FILTRATION RATE, and EDEMA. Kidney biopsy initially indicates focal segmental glomerular consolidation (hyalinosis) or scarring which can progress to globally sclerotic glomeruli leading to eventual KIDNEY FAILURE.A disease that manifests in a defined anatomical structure.
Alias:N/AN/A



Disease Association Statistics

Total Associated tsRNA Number:89
More Information
Network:
(Display the first 15 nodes)