Entry Detail


General Information

Database ID:TRD05110
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:mature-tRNA-Thr-TGT
tsRNA Type:N/A
Amino acid and Anticodon:ThrTGT
Sequence:GTAAACCAGGGGTCGCGAGTT
Related Target:N/A
Predicted Target:SHANK1//CHST10//TF//WSCD2//SSH1//KDM2B//TVP23B//DCC//TAF6//LANCL2
External Links:
MINTbase ID:tRF-21-SBKKRSL3E
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Thr-TGT-5-1
Anticodon:ThrTGT
tRNA_number:trna4
Chromosome:14
Strand:+
Coordinate:Start Site(bp): 21149883        End Site(bp): 21149903

[2] gtRNAdb_ID:tRNA-Thr-TGT-4-1
Anticodon:ThrTGT
tRNA_number:trna20
Chromosome:14
Strand:-
Coordinate:Start Site(bp): 21099337        End Site(bp): 21099357

[3] gtRNAdb_ID:tRNA-Thr-TGT-3-1
Anticodon:ThrTGT
tRNA_number:trna21
Chromosome:14
Strand:-
Coordinate:Start Site(bp): 21081967        End Site(bp): 21081987

[4] gtRNAdb_ID:tRNA-Thr-TGT-2-1
Anticodon:ThrTGT
tRNA_number:trna56
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 222638381        End Site(bp): 222638401



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D050197 DOID:1936
Disease Name:Atherosclerosisatherosclerosis
Category:MeSHDisease Ontology
Type:Cardiovascular Diseasesdisease of anatomical entity
Define:A thickening and loss of elasticity of the walls of ARTERIES that occurs with formation of ATHEROSCLEROTIC PLAQUES within the ARTERIAL INTIMA.N/A
Alias:N/AN/A



Disease Association Statistics

Total Associated tsRNA Number:271
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:36871792
Disease Name:Atherosclerosis
Tissue:Arterial Tissues
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:PANDORA-Seq detected a total of 1,383 differentially regulated sncRNAs (FC >2 and FDR <0.1), including 1160 rsRNAs and 195 tsRNAs (Fig. 5A and supplemental Tables S2–S8).
Comparision:HCD VS LCD
Mechanism:N/A