Entry Detail


General Information

Database ID:TRD04793
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:mature-tRNA-Leu-CAA_3_end
tsRNA Type:N/A
Amino acid and Anticodon:LeuCAA;LeuCAG
Sequence:GAATCCCACTTCTGACA
Related Target:N/A
Predicted Target:LRIG3//TAF8//SEMA3E//ZNF26//ITGA2//CPLX4//TUBGCP6//TSPAN9//SHE//CACUL1
External Links:
MINTbase ID:tRF-17-OMKIWU2
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Leu-CAG-2-1
Anticodon:LeuCAG
tRNA_number:trna17
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 57333929        End Site(bp): 57333945

[2] gtRNAdb_ID:tRNA-Leu-CAG-2-2
Anticodon:LeuCAG
tRNA_number:trna26
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 57334392        End Site(bp): 57334408

[3] gtRNAdb_ID:tRNA-Leu-CAA-3-1
Anticodon:LeuCAA
tRNA_number:trna141
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27570348        End Site(bp): 27570364

[4] gtRNAdb_ID:tRNA-Leu-CAA-2-1
Anticodon:LeuCAA
tRNA_number:trna140
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27573417        End Site(bp): 27573433

[5] gtRNAdb_ID:tRNA-Leu-CAA-1-1
Anticodon:LeuCAA
tRNA_number:trna100
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28864000        End Site(bp): 28864016

[6] gtRNAdb_ID:tRNA-Leu-CAA-1-2
Anticodon:LeuCAA
tRNA_number:trna74
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28908918        End Site(bp): 28908934

[7] gtRNAdb_ID:tRNA-Leu-CAA-4-1
Anticodon:LeuCAA
tRNA_number:trna58
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 249168143        End Site(bp): 249168159



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D050197 DOID:1936
Disease Name:Atherosclerosisatherosclerosis
Category:MeSHDisease Ontology
Type:Cardiovascular Diseasesdisease of anatomical entity
Define:A thickening and loss of elasticity of the walls of ARTERIES that occurs with formation of ATHEROSCLEROTIC PLAQUES within the ARTERIAL INTIMA.N/A
Alias:N/AN/A



Disease Association Statistics

Total Associated tsRNA Number:271
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:36871792
Disease Name:Atherosclerosis
Tissue:Arterial Tissues
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:PANDORA-Seq detected a total of 1,383 differentially regulated sncRNAs (FC >2 and FDR <0.1), including 1160 rsRNAs and 195 tsRNAs (Fig. 5A and supplemental Tables S2–S11).
Comparision:HCD VS LCD
Mechanism:N/A