Entry Detail


General Information

Database ID:TRD04490
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:mature-tRNA-Glu-CTC_n5
tsRNA Type:N/A
Amino acid and Anticodon:GluCTC
Sequence:GTTAGGATTCGGCGCTCT
Related Target:N/A
Predicted Target:DDX60//TBC1D17//BUB3//ABHD8//CXorf40B//OAS2//NCF1//PCDHGA9//AP3M1//TMEM132E
External Links:
MINTbase ID:tRF-18-7P596V03
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Glu-CTC-15-1
Anticodon:GluCTC
tRNA_number:trna25
Chromosome:2
Strand:-
Coordinate:Start Site(bp): 71273526        End Site(bp): 71273543

[2] gtRNAdb_ID:tRNA-Glu-CTC-12-1
Anticodon:GluCTC
tRNA_number:trna10
Chromosome:3
Strand:-
Coordinate:Start Site(bp): 103879561        End Site(bp): 103879578

[3] gtRNAdb_ID:tRNA-Glu-CTC-2-1
Anticodon:GluCTC
tRNA_number:trna59
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 249168464        End Site(bp): 249168481

[4] gtRNAdb_ID:tRNA-Glu-CTC-1-1
Anticodon:GluCTC
tRNA_number:trna116
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145399270        End Site(bp): 145399287

[5] gtRNAdb_ID:tRNA-Glu-CTC-1-5
Anticodon:GluCTC
tRNA_number:trna71
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161439226        End Site(bp): 161439243

[6] gtRNAdb_ID:tRNA-Glu-CTC-1-4
Anticodon:GluCTC
tRNA_number:trna74
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161431846        End Site(bp): 161431863

[7] gtRNAdb_ID:tRNA-Glu-CTC-1-3
Anticodon:GluCTC
tRNA_number:trna77
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161424435        End Site(bp): 161424452

[8] gtRNAdb_ID:tRNA-Glu-CTC-1-2
Anticodon:GluCTC
tRNA_number:trna80
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161417055        End Site(bp): 161417072

[9] gtRNAdb_ID:tRNA-Glu-CTC-1-6
Anticodon:GluCTC
tRNA_number:trna77
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28949993        End Site(bp): 28950010

[10] gtRNAdb_ID:tRNA-Glu-CTC-1-7
Anticodon:GluCTC
tRNA_number:trna87
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 126101430        End Site(bp): 126101447



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D050197 DOID:1936
Disease Name:Atherosclerosisatherosclerosis
Category:MeSHDisease Ontology
Type:Cardiovascular Diseasesdisease of anatomical entity
Define:A thickening and loss of elasticity of the walls of ARTERIES that occurs with formation of ATHEROSCLEROTIC PLAQUES within the ARTERIAL INTIMA.N/A
Alias:N/AN/A



Disease Association Statistics

Total Associated tsRNA Number:271
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:36871792
Disease Name:Atherosclerosis
Tissue:Arterial Tissues
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:PANDORA-Seq detected a total of 1,383 differentially regulated sncRNAs (FC >2 and FDR <0.1), including 1160 rsRNAs and 195 tsRNAs (Fig. 5A and supplemental Tables S2–S61).
Comparision:HCD VS LCD
Mechanism:N/A