Entry Detail


General Information

Database ID:TRD04399
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:mature-tRNA-Gln-CTG_n6
tsRNA Type:N/A
Amino acid and Anticodon:GlnCTG
Sequence:TGGACTCTGAATCCAG
Related Target:N/A
Predicted Target:FOLH1//NBEA//ANGPTL6//REV1//BCL9L//PANK1//ZNF529//RPRD2//GALNT5//CNKSR3
External Links:
MINTbase ID:tRF-16-9DWUH60
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Gln-CTG-12-1
Anticodon:GlnCTG
tRNA_number:trna3
Chromosome:12
Strand:+
Coordinate:Start Site(bp): 74851209        End Site(bp): 74851224

[2] gtRNAdb_ID:tRNA-Gln-CTG-7-1
Anticodon:GlnCTG
tRNA_number:trna22
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 147800964        End Site(bp): 147800979

[3] gtRNAdb_ID:tRNA-Gln-CTG-6-1
Anticodon:GlnCTG
tRNA_number:trna131
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27759164        End Site(bp): 27759179

[4] gtRNAdb_ID:tRNA-Gln-CTG-4-1
Anticodon:GlnCTG
tRNA_number:trna112
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 147737411        End Site(bp): 147737426

[5] gtRNAdb_ID:tRNA-Gln-CTG-4-2
Anticodon:GlnCTG
tRNA_number:trna28
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 149186152        End Site(bp): 149186167

[6] gtRNAdb_ID:tRNA-Gln-CTG-3-1
Anticodon:GlnCTG
tRNA_number:trna15
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 145963331        End Site(bp): 145963346

[7] gtRNAdb_ID:tRNA-Gln-CTG-3-2
Anticodon:GlnCTG
tRNA_number:trna19
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 147505065        End Site(bp): 147505080

[8] gtRNAdb_ID:tRNA-Gln-CTG-2-1
Anticodon:GlnCTG
tRNA_number:trna146
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27515560        End Site(bp): 27515575

[9] gtRNAdb_ID:tRNA-Gln-CTG-1-4
Anticodon:GlnCTG
tRNA_number:trna7
Chromosome:15
Strand:-
Coordinate:Start Site(bp): 66161429        End Site(bp): 66161444

[10] gtRNAdb_ID:tRNA-Gln-CTG-1-5
Anticodon:GlnCTG
tRNA_number:trna3
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 8023097        End Site(bp): 8023112

[11] gtRNAdb_ID:tRNA-Gln-CTG-1-1
Anticodon:GlnCTG
tRNA_number:trna1
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 18836429        End Site(bp): 18836444

[12] gtRNAdb_ID:tRNA-Gln-CTG-1-2
Anticodon:GlnCTG
tRNA_number:trna49
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27487335        End Site(bp): 27487350

[13] gtRNAdb_ID:tRNA-Gln-CTG-1-3
Anticodon:GlnCTG
tRNA_number:trna99
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28909407        End Site(bp): 28909422



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D050197 DOID:1936
Disease Name:Atherosclerosisatherosclerosis
Category:MeSHDisease Ontology
Type:Cardiovascular Diseasesdisease of anatomical entity
Define:A thickening and loss of elasticity of the walls of ARTERIES that occurs with formation of ATHEROSCLEROTIC PLAQUES within the ARTERIAL INTIMA.N/A
Alias:N/AN/A



Disease Association Statistics

Total Associated tsRNA Number:271
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:36871792
Disease Name:Atherosclerosis
Tissue:Arterial Tissues
Dysfunction Pattern:Down-Regulation
Validated Method:High-throughput sequencing
Description:PANDORA-Seq detected a total of 1,383 differentially regulated sncRNAs (FC >2 and FDR <0.1), including 1160 rsRNAs and 195 tsRNAs (Fig. 5A and supplemental Tables S2–S145).
Comparision:HCD VS LCD
Mechanism:N/A