Entry Detail


General Information

Database ID:TRD04302
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:mature-tRNA-Asp-GTC_n11
tsRNA Type:N/A
Amino acid and Anticodon:AspGTC
Sequence:CGCGGGAGACCGGGGTTCGATTCCCCGACGGGG
Related Target:N/A
Predicted Target:MTCL1//INPP5E//LRRC37B//SH3D21//FBXL14//CACNA1C//GRIK5//FAM47B//NDST1//TMEM59L
External Links:
MINTbase ID:tRF-33-L85DMKYUYRLHDY
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Asp-GTC-3-1
Anticodon:AspGTC
tRNA_number:trna144
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27551238        End Site(bp): 27551270

[2] gtRNAdb_ID:tRNA-Asp-GTC-2-5
Anticodon:AspGTC
tRNA_number:trna69
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161440207        End Site(bp): 161440239

[3] gtRNAdb_ID:tRNA-Asp-GTC-2-4
Anticodon:AspGTC
tRNA_number:trna72
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161432826        End Site(bp): 161432858

[4] gtRNAdb_ID:tRNA-Asp-GTC-2-3
Anticodon:AspGTC
tRNA_number:trna75
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161425416        End Site(bp): 161425448

[5] gtRNAdb_ID:tRNA-Asp-GTC-2-2
Anticodon:AspGTC
tRNA_number:trna78
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161418035        End Site(bp): 161418067

[6] gtRNAdb_ID:tRNA-Asp-GTC-2-1
Anticodon:AspGTC
tRNA_number:trna81
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161410617        End Site(bp): 161410649

[7] gtRNAdb_ID:tRNA-Asp-GTC-2-10
Anticodon:AspGTC
tRNA_number:trna10
Chromosome:12
Strand:-
Coordinate:Start Site(bp): 125424195        End Site(bp): 125424227

[8] gtRNAdb_ID:tRNA-Asp-GTC-2-9
Anticodon:AspGTC
tRNA_number:trna12
Chromosome:12
Strand:-
Coordinate:Start Site(bp): 125411893        End Site(bp): 125411925

[9] gtRNAdb_ID:tRNA-Asp-GTC-2-8
Anticodon:AspGTC
tRNA_number:trna4
Chromosome:12
Strand:+
Coordinate:Start Site(bp): 96429836        End Site(bp): 96429868

[10] gtRNAdb_ID:tRNA-Asp-GTC-2-11
Anticodon:AspGTC
tRNA_number:trna38
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 8125558        End Site(bp): 8125590

[11] gtRNAdb_ID:tRNA-Asp-GTC-2-6
Anticodon:AspGTC
tRNA_number:trna45
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27447490        End Site(bp): 27447522

[12] gtRNAdb_ID:tRNA-Asp-GTC-2-7
Anticodon:AspGTC
tRNA_number:trna48
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27471560        End Site(bp): 27471592



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D050197 DOID:1936
Disease Name:Atherosclerosisatherosclerosis
Category:MeSHDisease Ontology
Type:Cardiovascular Diseasesdisease of anatomical entity
Define:A thickening and loss of elasticity of the walls of ARTERIES that occurs with formation of ATHEROSCLEROTIC PLAQUES within the ARTERIAL INTIMA.N/A
Alias:N/AN/A



Disease Association Statistics

Total Associated tsRNA Number:271
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:36871792
Disease Name:Atherosclerosis
Tissue:Arterial Tissues
Dysfunction Pattern:Down-Regulation
Validated Method:High-throughput sequencing
Description:PANDORA-Seq detected a total of 1,383 differentially regulated sncRNAs (FC >2 and FDR <0.1), including 1160 rsRNAs and 195 tsRNAs (Fig. 5A and supplemental Tables S2–S102).
Comparision:HCD VS LCD
Mechanism:N/A