Entry Detail



General Information

Database ID:TRD04042
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-1:28-Val-CAC-2
tsRNA Type:tRF-5
Amino acid and Anticodon:ValCAC
Sequence:GCTTCTGTAGTGTAGTGGTTATCACGTT
Related Target:N/A
Predicted Target:SREBF2//ZBED2//FNTB//CHURC1-FNTB//CASZ1//SCIN//STARD6//THOP1//PTPN14//TUBB
External Links:
MINTbase ID:tRF-28-Q99P9P9NH50E
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Val-CAC-2-1
Anticodon:ValCAC
tRNA_number:trna152
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27248094        End Site(bp): 27248121



tsRNA Association Statistics

Total Associated Disease Number:13
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D000077274DOID:9261
Disease Name:Nasopharyngeal Carcinomanasopharynx carcinoma
Category:MeSHDisease Ontology
Type:Neoplasms//Stomatognathic Diseases//Otorhinolaryngologic Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:A carcinoma that originates in the EPITHELIUM of the NASOPHARYNX and includes four subtypes: keratinizing squamous cell, non-keratinizing, basaloid squamous cell, and PAPILLARY ADENOCARCINOMA. It is most prevalent in Southeast Asian populations and is associated with EPSTEIN-BARR VIRUS INFECTIONS. Somatic mutations associated with this cancer have been identified in NPCR, BAP1, UBAP1, ERBB2, ERBB3, MLL2, PIK3CA, KRAS, NRAS, and ARID1A genes.A pharynx cancer that is located in the nasopharynx, the uppermost region of the pharynx or throat, where the nasal passages and auditory tubes join the remainder of the upper respiratory tract.
Alias:N/Acarcinoma of nasopharynx//malignant Nasopharyngeal tumor//malignant neoplasm of nasopharynx//Nasopharyngeal carcinoma//nasopharynx cancer



Disease Association Statistics

Total Associated tsRNA Number:21
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:34988117
Disease Name:Nasopharyngeal Carcinoma
Tissue:NPC tissue
Dysfunction Pattern:Up-Regulation
Validated Method:RT-PCR//High-throughput sequencing
Description:N/A
Comparision:Cancer VS Normal
Mechanism:N/A