Entry Detail


General Information

Database ID:TRD04010
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRNA-Val-AAC-5
tsRNA Type:tRF-5
Amino acid and Anticodon:ValAAC
Sequence:GTTTCCGTAGTGTAGTGGTTATC
Related Target:N/A
Predicted Target:CTNND2//RGS8//HNRNPUL1//ELMO3//CDH18//NEFL//ZBED2//CEL//KRTAP19-8//FAM171A1
External Links:
MINTbase ID:tRF-23-79MP9P9NDD
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Val-AAC-5-1
Anticodon:ValAAC
tRNA_number:trna37
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27203288        End Site(bp): 27203310

[2] gtRNAdb_ID:tRNA-Val-AAC-4-1
Anticodon:ValAAC
tRNA_number:trna136
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27648935        End Site(bp): 27648957

[3] gtRNAdb_ID:tRNA-Val-AAC-3-1
Anticodon:ValAAC
tRNA_number:trna139
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27618757        End Site(bp): 27618779

[4] gtRNAdb_ID:tRNA-Val-AAC-1-1
Anticodon:ValAAC
tRNA_number:trna2
Chromosome:3
Strand:+
Coordinate:Start Site(bp): 169490018        End Site(bp): 169490040

[5] gtRNAdb_ID:tRNA-Val-AAC-1-4
Anticodon:ValAAC
tRNA_number:trna12
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180645320        End Site(bp): 180645342

[6] gtRNAdb_ID:tRNA-Val-AAC-1-2
Anticodon:ValAAC
tRNA_number:trna4
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180591154        End Site(bp): 180591176

[7] gtRNAdb_ID:tRNA-Val-AAC-1-3
Anticodon:ValAAC
tRNA_number:trna5
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180596610        End Site(bp): 180596632

[8] gtRNAdb_ID:tRNA-Val-AAC-1-5
Anticodon:ValAAC
tRNA_number:trna132
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27721229        End Site(bp): 27721251

[9] gtRNAdb_ID:tRNA-Val-CAC-5-1
Anticodon:ValCAC
tRNA_number:trna90
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149684139        End Site(bp): 149684161

[10] gtRNAdb_ID:tRNA-Val-CAC-4-1
Anticodon:ValCAC
tRNA_number:trna98
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149298605        End Site(bp): 149298627

[11] gtRNAdb_ID:tRNA-Val-CAC-1-1
Anticodon:ValCAC
tRNA_number:trna85
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161369540        End Site(bp): 161369562

[12] gtRNAdb_ID:tRNA-Val-CAC-1-5
Anticodon:ValCAC
tRNA_number:trna10
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180649445        End Site(bp): 180649467

[13] gtRNAdb_ID:tRNA-Val-CAC-1-3
Anticodon:ValCAC
tRNA_number:trna18
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180529303        End Site(bp): 180529325

[14] gtRNAdb_ID:tRNA-Val-CAC-1-2
Anticodon:ValCAC
tRNA_number:trna2
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180524070        End Site(bp): 180524092

[15] gtRNAdb_ID:tRNA-Val-CAC-1-4
Anticodon:ValCAC
tRNA_number:trna6
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180600650        End Site(bp): 180600672

[16] gtRNAdb_ID:tRNA-Val-CAC-1-6
Anticodon:ValCAC
tRNA_number:trna9
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26538282        End Site(bp): 26538304



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D008113DOID:3571
Disease Name:Liver Neoplasmsliver cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the LIVER.A hepatobiliary system cancer that is located_in the liver.
Alias:Cancer of Liver//Cancer of the Liver//Cancer, Hepatocellular//Hepatic Cancer//Hepatic Neoplasms//Hepatocellular Cancer//Liver Cancer//Neoplasms, Hepatic//Neoplasms, LiverCa liver - primary//hepatic cancer//hepatic neoplasm//malignant hepato-biliary neoplasm//malignant neoplasm of liver//malignant neoplasm of liver, not specified as primary or secondary malignant neoplasm of liver, primary [EXACT] malignant tumor of liver [EXACT] neoplasm of liver [EXACT] non-resectable primary hepatic malignant neoplasm [EXACT] primary liver cancer [EXACT] primary malignant neoplasm of liver [EXACT] Resectable malignant neoplasm of Liver [EXACT] resectable malignant neoplasm of the liver [EXACT]



Disease Association Statistics

Total Associated tsRNA Number:39
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:30940133
Disease Name:Liver Neoplasms
Tissue:Plasma Exosomes
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:Importantly, patients with liver cancer exhibited significantly higher levels of four tsRNAs (tRNA-ValTAC-3, tRNA-GlyTCC-5, tRNA-ValAAC-5 and tRNA-GluCTC-5) in plasma exosome, demonstrating that plasma exosomal tsRNA could serve as a novel diagnostic biomarker.
Comparision:Cancer VS Normal
Mechanism:N/A