Entry Detail


General Information

Database ID:TRD03890
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:AS-tDR-001032
tsRNA Type:tRF-5
Amino acid and Anticodon:SerGCT
Sequence:GACGAGGTGGCCGAGTGG
Related Target:N/A
Predicted Target:RNF130//PTGER1//RAP1GAP//GPS1//ADAM23//FADS2//RIN1//SRRM2//ATP9B//KIAA0556
External Links:
MINTbase ID:tRF-18-OUR83004
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Ser-GCT-5-1
Anticodon:SerGCT
tRNA_number:trna62
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28180815        End Site(bp): 28180832

[2] gtRNAdb_ID:tRNA-Ser-GCT-4-2
Anticodon:SerGCT
tRNA_number:trna10
Chromosome:15
Strand:-
Coordinate:Start Site(bp): 40886087        End Site(bp): 40886104

[3] gtRNAdb_ID:tRNA-Ser-GCT-4-3
Anticodon:SerGCT
tRNA_number:trna7
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 8090184        End Site(bp): 8090201

[4] gtRNAdb_ID:tRNA-Ser-GCT-4-1
Anticodon:SerGCT
tRNA_number:trna123
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28565181        End Site(bp): 28565198

[5] gtRNAdb_ID:tRNA-Ser-GCT-3-1
Anticodon:SerGCT
tRNA_number:trna8
Chromosome:11
Strand:+
Coordinate:Start Site(bp): 66115591        End Site(bp): 66115608

[6] gtRNAdb_ID:tRNA-Ser-GCT-2-1
Anticodon:SerGCT
tRNA_number:trna43
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27265775        End Site(bp): 27265792

[7] gtRNAdb_ID:tRNA-Ser-GCT-1-1
Anticodon:SerGCT
tRNA_number:trna31
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27065085        End Site(bp): 27065102



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D009404N/A
Disease Name:Nephrotic SyndromeN/A
Category:MeSHDisease Ontology
Type:N/AN/A
Define:N/AN/A
Alias:Congenital nephrotic syndrome 1//Congenital nephrotic syndrome, Finnish type//Finnish congenital nephrosis//Nephrosis 1, congenital, Finnish type//Nephrotic Syndrome, Early-Onset, Type 3//Nephrotic Syndrome, Idiopathic//Nephrotic Syndrome, Type 1//Nephrotic Syndrome, Type 2//Nephrotic Syndrome, Type 3//Nphs3N/A



Disease Association Statistics

Total Associated tsRNA Number:209
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:32685525
Disease Name:Nephrotic Syndrome
Tissue:Podocyte
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:N/A
Comparision:Adriamycin-treated Group VS None
Mechanism:N/A