Entry Detail


General Information

Database ID:TRD03661
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-28-PSQP4PW3FJD0
tsRNA Type:tRF-5
Amino acid and Anticodon:LysCTT
Sequence:GCCCGGCTAGCTCAGTCGGTAGAGCATG
Related Target:N/A
Predicted Target:EBI3//RPS6KA2//RPS6KA1//RHOD//PIK3CD//ACAN//FBXL12//PRPF40B//B3GNT4//NMT1
External Links:
MINTbase ID:tRF-28-PSQP4PW3FJD0
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Lys-CTT-4-1
Anticodon:LysCTT
tRNA_number:trna10
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3241501        End Site(bp): 3241528

[2] gtRNAdb_ID:tRNA-Lys-CTT-3-1
Anticodon:LysCTT
tRNA_number:trna32
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 3207451        End Site(bp): 3207478

[3] gtRNAdb_ID:tRNA-Lys-CTT-2-1
Anticodon:LysCTT
tRNA_number:trna119
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145395567        End Site(bp): 145395594

[4] gtRNAdb_ID:tRNA-Lys-CTT-2-5
Anticodon:LysCTT
tRNA_number:trna7
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3225692        End Site(bp): 3225719

[5] gtRNAdb_ID:tRNA-Lys-CTT-2-3
Anticodon:LysCTT
tRNA_number:trna11
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180649024        End Site(bp): 180649051

[6] gtRNAdb_ID:tRNA-Lys-CTT-2-2
Anticodon:LysCTT
tRNA_number:trna9
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180634755        End Site(bp): 180634782

[7] gtRNAdb_ID:tRNA-Lys-CTT-2-4
Anticodon:LysCTT
tRNA_number:trna13
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26556774        End Site(bp): 26556801

[8] gtRNAdb_ID:tRNA-Lys-CTT-1-1
Anticodon:LysCTT
tRNA_number:trna13
Chromosome:14
Strand:-
Coordinate:Start Site(bp): 58706658        End Site(bp): 58706685

[9] gtRNAdb_ID:tRNA-Lys-CTT-1-2
Anticodon:LysCTT
tRNA_number:trna2
Chromosome:15
Strand:+
Coordinate:Start Site(bp): 79152904        End Site(bp): 79152931



tsRNA Association Statistics

Total Associated Disease Number:33
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D006528DOID:684
Disease Name:Carcinoma, Hepatocellularhepatocellular carcinoma
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:A primary malignant neoplasm of epithelial liver cells. It ranges from a well-differentiated tumor with EPITHELIAL CELLS indistinguishable from normal HEPATOCYTES to a poorly differentiated neoplasm. The cells may be uniform or markedly pleomorphic, or form GIANT CELLS. Several classification schemes have been suggested.A liver carcinoma that has_material_basis_in undifferentiated hepatocytes and located_in the liver.
Alias:Hepatocellular Carcinoma//Hepatoma//Liver Cancer, Adult//Liver Cell Carcinoma//Liver Cell Carcinoma, AdultHepatoma



Disease Association Statistics

Total Associated tsRNA Number:61
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:35879647
Disease Name:Carcinoma, Hepatocellular
Tissue:Hepatocellular Carcinoma
Dysfunction Pattern:Up-Regulation
Validated Method:RT-PCR//High-throughput sequencing
Description:N/A
Comparision:Cancer VS Normal
Mechanism:N/A