Entry Detail


General Information

Database ID:TRD03650
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-1:32-Lys-CTT-1-M2
tsRNA Type:tRF-5
Amino acid and Anticodon:LysCTT
Sequence:GCCCGGCTAGCTCAGTCGGTAGAGCATGGGAC
Related Target:N/A
Predicted Target:EBI3//ZDHHC3//ZBTB17//GPER1//SMOC2//GNA14//RPS6KA2//TNRC18//CFAP410//WDR54
External Links:
MINTbase ID:tRF-32-PSQP4PW3FJIK1
tRFdb ID:tRFdb-5006c

[1] gtRNAdb_ID:tRNA-Lys-CTT-4-1
Anticodon:LysCTT
tRNA_number:trna10
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3241501        End Site(bp): 3241532

[2] gtRNAdb_ID:tRNA-Lys-CTT-1-1
Anticodon:LysCTT
tRNA_number:trna13
Chromosome:14
Strand:-
Coordinate:Start Site(bp): 58706654        End Site(bp): 58706685

[3] gtRNAdb_ID:tRNA-Lys-CTT-1-2
Anticodon:LysCTT
tRNA_number:trna2
Chromosome:15
Strand:+
Coordinate:Start Site(bp): 79152904        End Site(bp): 79152935



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D015179DOID:9256
Disease Name:Colorectal Neoplasmscolorectal cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the COLON or the RECTUM or both. Risk factors for colorectal cancer include chronic ULCERATIVE COLITIS; FAMILIAL POLYPOSIS COLI; exposure to ASBESTOS; and irradiation of the CERVIX UTERI.A large intestine cancer that is located_in the colon and/or located_in the rectum.
Alias:Colorectal Cancer//Colorectal Carcinoma//Colorectal Tumors//Neoplasms, ColorectalN/A



Disease Association Statistics

Total Associated tsRNA Number:195
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:37389118
Disease Name:Colorectal Neoplasms
Tissue:Colon
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:Differences in tRFs and tiRNAs found in SSLs and NCs were determined under the following conditions: absolute log2 (fold change) ≥ 1.5 and P < 0.05. Under these conditions, we identified 52 upregulated and 28 downregulated tRFs and tiRNAs and have shown them in a hierarchical cluster heatmap (Figure ​(Figure1D1D).
Comparision:SSL VS Normal
Mechanism:N/A