Entry Detail


General Information

Database ID:TRD03529
Confidence:Low
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:chr6.trna80-IleAAT@1.20.20_3_15|Out
tsRNA Type:tRF-5
Amino acid and Anticodon:IleAAT
Sequence:GGCCGGTTAGCTCAGTTGGT
Related Target:N/A
Predicted Target:SRSF8//CILP//CLCNKA//CHIA//AMBP//SALL3//NMRAL1//PODNL1//BMP8B//C8A
External Links:
MINTbase ID:tRF-20-6S7P4PZ3
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Ser-ACT-1-1
Anticodon:SerACT
tRNA_number:trna41
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27261671        End Site(bp): 27261690

[2] gtRNAdb_ID:tRNA-Ile-AAT-7-1
Anticodon:IleAAT
tRNA_number:trna165
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26721275        End Site(bp): 26721294

[3] gtRNAdb_ID:tRNA-Ile-AAT-7-2
Anticodon:IleAAT
tRNA_number:trna28
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26780832        End Site(bp): 26780851

[4] gtRNAdb_ID:tRNA-Ile-AAT-6-1
Anticodon:IleAAT
tRNA_number:trna163
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26745309        End Site(bp): 26745328

[5] gtRNAdb_ID:tRNA-Ile-AAT-5-4
Anticodon:IleAAT
tRNA_number:trna10
Chromosome:14
Strand:+
Coordinate:Start Site(bp): 102783429        End Site(bp): 102783448

[6] gtRNAdb_ID:tRNA-Ile-AAT-5-5
Anticodon:IleAAT
tRNA_number:trna9
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 8090911        End Site(bp): 8090930

[7] gtRNAdb_ID:tRNA-Ile-AAT-5-1
Anticodon:IleAAT
tRNA_number:trna11
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26554350        End Site(bp): 26554369

[8] gtRNAdb_ID:tRNA-Ile-AAT-5-3
Anticodon:IleAAT
tRNA_number:trna154
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27205404        End Site(bp): 27205423

[9] gtRNAdb_ID:tRNA-Ile-AAT-5-2
Anticodon:IleAAT
tRNA_number:trna158
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27145048        End Site(bp): 27145067

[10] gtRNAdb_ID:tRNA-Ile-AAT-4-1
Anticodon:IleAAT
tRNA_number:trna34
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 8130363        End Site(bp): 8130382

[11] gtRNAdb_ID:tRNA-Ile-AAT-2-1
Anticodon:IleAAT
tRNA_number:trna59
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27655967        End Site(bp): 27655986

[12] gtRNAdb_ID:tRNA-Ile-AAT-1-1
Anticodon:IleAAT
tRNA_number:trna80
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 58149254        End Site(bp): 58149273

[13] gtRNAdb_ID:tRNA-Ile-GAT-1-3
Anticodon:IleGAT
tRNA_number:trna5
Chromosome:X
Strand:-
Coordinate:Start Site(bp): 3833325        End Site(bp): 3833344

[14] gtRNAdb_ID:tRNA-Ile-GAT-1-2
Anticodon:IleGAT
tRNA_number:trna6
Chromosome:X
Strand:-
Coordinate:Start Site(bp): 3794896        End Site(bp): 3794915

[15] gtRNAdb_ID:tRNA-Ile-GAT-1-1
Anticodon:IleGAT
tRNA_number:trna7
Chromosome:X
Strand:-
Coordinate:Start Site(bp): 3756472        End Site(bp): 3756491



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D001943DOID:1612
Disease Name:Breast Neoplasmsbreast cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Skin and Connective Tissue Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the human BREAST.A thoracic cancer that originates in the mammary gland.
Alias:Breast Cancer//Breast Carcinoma//Breast Tumors//Cancer of Breast//Cancer of the Breast//Human Mammary Carcinoma//Malignant Neoplasm of Breast//Malignant Tumor of Breast//Mammary Cancer//Mammary Carcinoma, Human//Mammary Neoplasm, Human//Mammary Neoplasms, Human//Neoplasms, Breast//Tumors, Breastbreast tumor//malignant neoplasm of breast//malignant tumor of the breast//mammary cancer//mammary neoplasm//mammary tumor//primary breast cancer



Disease Association Statistics

Total Associated tsRNA Number:549
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:Data Mining



Reference

[1] PubMed ID:29229607
Disease Name:Breast Neoplasms
Tissue:Breast
Dysfunction Pattern:Up-Regulation
Validated Method:Data Mining
Description:N/A
Comparision:Tumor/White VS Normal/White
Mechanism:N/A