Entry Detail


General Information

Database ID:TRD03443
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-Gly-TCC-007
tsRNA Type:tRF-5
Amino acid and Anticodon:GlyTCC
Sequence:GCGTTGGTGGTATAGTGGTGAGC
Related Target:N/A
Predicted Target:PHGDH//SPSB1//SLC6A9//ICAM5//ENDOG//CPHXL//ZNF775//MRPL54//CAPSL//SLC34A1
External Links:
MINTbase ID:tRF-23-QNR8VP949
tRFdb ID:tRFdb-5008b

[1] gtRNAdb_ID:tRNA-Gly-TCC-4-1
Anticodon:GlyTCC
tRNA_number:trna82
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161410010        End Site(bp): 161410032

[2] gtRNAdb_ID:tRNA-Gly-TCC-2-1
Anticodon:GlyTCC
tRNA_number:trna117
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145397913        End Site(bp): 145397935

[3] gtRNAdb_ID:tRNA-Gly-TCC-2-6
Anticodon:GlyTCC
tRNA_number:trna45
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161500903        End Site(bp): 161500925

[4] gtRNAdb_ID:tRNA-Gly-TCC-2-5
Anticodon:GlyTCC
tRNA_number:trna70
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161439596        End Site(bp): 161439618

[5] gtRNAdb_ID:tRNA-Gly-TCC-2-4
Anticodon:GlyTCC
tRNA_number:trna73
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161432215        End Site(bp): 161432237

[6] gtRNAdb_ID:tRNA-Gly-TCC-2-3
Anticodon:GlyTCC
tRNA_number:trna76
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161424805        End Site(bp): 161424827

[7] gtRNAdb_ID:tRNA-Gly-TCC-2-2
Anticodon:GlyTCC
tRNA_number:trna79
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161417424        End Site(bp): 161417446



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D009914DOID:5773
Disease Name:Oral Submucous Fibrosisoral submucous fibrosis
Category:MeSHDisease Ontology
Type:Stomatognathic Diseasesdisease of anatomical entity
Define:Irreversible FIBROSIS of the submucosal tissue of the MOUTH.A mouth disease that is characterized by juxta-epithelial inflammatory reaction and progressive fibrosis of the submucosal tissues.
Alias:N/AOral cavity Submucous Fibrosis//Oral submucosal fibrosis//Oral submucosal fibrosis, including of tongue



Disease Association Statistics

Total Associated tsRNA Number:126
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:34558114
Disease Name:Oral Submucous Fibrosis
Tissue:Oral Submucous Fibrosis
Dysfunction Pattern:Down-Regulation
Validated Method:High-throughput sequencing
Description:Of 126 tsRNAs in OSF were dysregulated, including 73 upregulated tsRNAs and 53 downregulated tsRNAs. The downregulated tiRNA-Val-CAC-002,tRF-Asn-GTT-005, tRF-Trp-CCA-007 and upregulated tRF-Gly-TCC-016,tRF-Pro-TGG-009 showed significant differences by qRT-PCR validation.
Comparision:Disease VS Control
Mechanism:tRNA-derived fragments are dysregulated and could be involved in the pathogenesis of oral submucous fibrosis.