Entry Detail


General Information

Database ID:TRD03297
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-Gly-CCC-009
tsRNA Type:tRF-5
Amino acid and Anticodon:GlyCCC
Sequence:GCATTGGTGGTTCAGTGGTAGAAT
Related Target:N/A
Predicted Target:FCGR2A//OLFM3//OR7C1//MUCL1//PCGF5//HSD17B4//MRRF//PEG10//FAM149B1//SH3GLB1
External Links:
MINTbase ID:tRF-24-PNR8YP9LH7
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Gly-CCC-1-1
Anticodon:GlyCCC
tRNA_number:trna133
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 16872481        End Site(bp): 16872504

[2] gtRNAdb_ID:tRNA-Gly-CCC-1-2
Anticodon:GlyCCC
tRNA_number:trna4
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 17188416        End Site(bp): 17188439

[3] gtRNAdb_ID:tRNA-Gly-GCC-5-1
Anticodon:GlyGCC
tRNA_number:trna18
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 70822597        End Site(bp): 70822620

[4] gtRNAdb_ID:tRNA-Gly-GCC-3-1
Anticodon:GlyGCC
tRNA_number:trna25
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 70812161        End Site(bp): 70812184

[5] gtRNAdb_ID:tRNA-Gly-GCC-2-1
Anticodon:GlyGCC
tRNA_number:trna68
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161493684        End Site(bp): 161493707

[6] gtRNAdb_ID:tRNA-Gly-GCC-2-5
Anticodon:GlyGCC
tRNA_number:trna19
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 70823410        End Site(bp): 70823433

[7] gtRNAdb_ID:tRNA-Gly-GCC-2-4
Anticodon:GlyGCC
tRNA_number:trna24
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 70812989        End Site(bp): 70813012

[8] gtRNAdb_ID:tRNA-Gly-GCC-2-6
Anticodon:GlyGCC
tRNA_number:trna5
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 8029064        End Site(bp): 8029087

[9] gtRNAdb_ID:tRNA-Gly-GCC-2-2
Anticodon:GlyGCC
tRNA_number:trna19
Chromosome:2
Strand:-
Coordinate:Start Site(bp): 157257706        End Site(bp): 157257729

[10] gtRNAdb_ID:tRNA-Gly-GCC-2-3
Anticodon:GlyGCC
tRNA_number:trna128
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27870733        End Site(bp): 27870756



tsRNA Association Statistics

Total Associated Disease Number:21
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D019636DOID:1289
Disease Name:Neurodegenerative Diseasesneurodegenerative disease
Category:MeSHDisease Ontology
Type:Nervous System Diseasesdisease of anatomical entity
Define:Hereditary and sporadic conditions which are characterized by progressive nervous system dysfunction. These disorders are often associated with atrophy of the affected central or peripheral nervous system structures.A central nervous system disease that results in the progressive deterioration of function or structure of neurons.
Alias:Degenerative Diseases, Central Nervous System//Degenerative Diseases, Nervous System//Degenerative Diseases, Neurologic//Degenerative Diseases, Spinal Cord//Degenerative Neurologic Diseases//Degenerative Neurologic Disorders//Nervous System Degenerative Diseases//Neurodegenerative Disorders//Neurologic Degenerative Conditions//Neurologic Degenerative Diseases//Neurologic Diseases, Degenerativedegenerative disease



Disease Association Statistics

Total Associated tsRNA Number:124
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:34269214
Disease Name:Neurodegenerative Diseases
Tissue:N/A
Dysfunction Pattern:N/A
Validated Method:High-throughput sequencing
Description:Based on microRNA-like seed matching and Pearson correlation analysis,57 differentially expressed tsRNA-mRNA interaction pairs were identified,including 29 tsRNAs and 26 mRNAs.
Comparision:N/A
Mechanism:N/A