Entry Detail


General Information

Database ID:TRD03027
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-19-S998LOJ4
tsRNA Type:tRF-5
Amino acid and Anticodon:AsnGTT
Sequence:GTCTCTGTGGCGCAATCGG
Related Target:N/A
Predicted Target:GRAPL//AQP2//TPD52//IRF2BPL//AC036214.3//ZPLD1//RADIL//CDS2//LARGE1//AMBP
External Links:
MINTbase ID:tRF-19-S998LOJ4
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Asn-ATT-1-1
Anticodon:AsnATT
tRNA_number:trna20
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 147719029        End Site(bp): 147719047

[2] gtRNAdb_ID:tRNA-Asn-GTT-16-1
Anticodon:AsnGTT
tRNA_number:trna10
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 143690028        End Site(bp): 143690046

[3] gtRNAdb_ID:tRNA-Asn-GTT-16-3
Anticodon:AsnGTT
tRNA_number:trna122
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 144488898        End Site(bp): 144488916

[4] gtRNAdb_ID:tRNA-Asn-GTT-16-2
Anticodon:AsnGTT
tRNA_number:trna123
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 144308669        End Site(bp): 144308687

[5] gtRNAdb_ID:tRNA-Asn-GTT-16-4
Anticodon:AsnGTT
tRNA_number:trna24
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 147877537        End Site(bp): 147877555

[6] gtRNAdb_ID:tRNA-Asn-GTT-16-5
Anticodon:AsnGTT
tRNA_number:trna30
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 149608609        End Site(bp): 149608627

[7] gtRNAdb_ID:tRNA-Asn-GTT-12-1
Anticodon:AsnGTT
tRNA_number:trna97
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149326327        End Site(bp): 149326345

[8] gtRNAdb_ID:tRNA-Asn-GTT-10-1
Anticodon:AsnGTT
tRNA_number:trna124
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 143879887        End Site(bp): 143879905

[9] gtRNAdb_ID:tRNA-Asn-GTT-9-2
Anticodon:AsnGTT
tRNA_number:trna113
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 147520822        End Site(bp): 147520840

[10] gtRNAdb_ID:tRNA-Asn-GTT-9-1
Anticodon:AsnGTT
tRNA_number:trna115
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145979089        End Site(bp): 145979107

[11] gtRNAdb_ID:tRNA-Asn-GTT-8-1
Anticodon:AsnGTT
tRNA_number:trna89
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149711853        End Site(bp): 149711871

[12] gtRNAdb_ID:tRNA-Asn-GTT-5-1
Anticodon:AsnGTT
tRNA_number:trna136
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 16847135        End Site(bp): 16847153

[13] gtRNAdb_ID:tRNA-Asn-GTT-4-1
Anticodon:AsnGTT
tRNA_number:trna7
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 17216172        End Site(bp): 17216190

[14] gtRNAdb_ID:tRNA-Asn-GTT-3-2
Anticodon:AsnGTT
tRNA_number:trna107
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 148760411        End Site(bp): 148760429

[15] gtRNAdb_ID:tRNA-Asn-GTT-3-1
Anticodon:AsnGTT
tRNA_number:trna108
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 148598369        End Site(bp): 148598387

[16] gtRNAdb_ID:tRNA-Asn-GTT-2-1
Anticodon:AsnGTT
tRNA_number:trna26
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 148248115        End Site(bp): 148248133

[17] gtRNAdb_ID:tRNA-Asn-GTT-2-2
Anticodon:AsnGTT
tRNA_number:trna83
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161397922        End Site(bp): 161397940

[18] gtRNAdb_ID:tRNA-Asn-GTT-2-3
Anticodon:AsnGTT
tRNA_number:trna4
Chromosome:10
Strand:-
Coordinate:Start Site(bp): 22518493        End Site(bp): 22518511

[19] gtRNAdb_ID:tRNA-Asn-GTT-2-4
Anticodon:AsnGTT
tRNA_number:trna7
Chromosome:13
Strand:-
Coordinate:Start Site(bp): 31248156        End Site(bp): 31248174

[20] gtRNAdb_ID:tRNA-Asn-GTT-2-5
Anticodon:AsnGTT
tRNA_number:trna31
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 36908089        End Site(bp): 36908107

[21] gtRNAdb_ID:tRNA-Asn-GTT-2-6
Anticodon:AsnGTT
tRNA_number:trna1
Chromosome:19
Strand:+
Coordinate:Start Site(bp): 1383562        End Site(bp): 1383580

[22] gtRNAdb_ID:tRNA-Asn-GTT-1-1
Anticodon:AsnGTT
tRNA_number:trna47
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161510031        End Site(bp): 161510049



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D016889DOID:0050939
Disease Name:Endometrial Neoplasmsuterine corpus endometrial carcinoma
Category:MeSHDisease Ontology
Type:Neoplasms//Urogenital Diseasesdisease of cellular proliferation//disease of anatomical entity
Define:Tumors or cancer of ENDOMETRIUM, the mucous lining of the UTERUS. These neoplasms can be benign or malignant. Their classification and grading are based on the various cell types and the percent of undifferentiated cells.A uterine corpus cancer that is derives_from the inner lining of the uterus.
Alias:Cancer of Endometrium//Cancer of the Endometrium//Carcinoma of Endometrium//Endometrial Cancer//Endometrial Carcinoma//Endometrium Cancer//Neoplasms, EndometrialN/A



Disease Association Statistics

Total Associated tsRNA Number:227
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:36803014
Disease Name:Endometrial Neoplasms
Tissue:Endometrium
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:The levels of tsRNAs between EC tissues and normal endometrial tissues were compared and 173 differentially expressed tsRNAs were identified, including 80 downregulated and 93 upregulated tsRNAs (Figure 1B & C). All differentially expressed tsRNAs are listed in Supplementary Table 2.
Comparision:Cancer VS Normal
Mechanism:N/A