Entry Detail


General Information

Database ID:TRD03025
Confidence:Low
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:chr1.trna47-AsnGTT@1.19.19_2_22
tsRNA Type:tRF-5
Amino acid and Anticodon:AsnGTT
Sequence:GTCTCTGTGGCGCAATCGG
Related Target:N/A
Predicted Target:GRAPL//AQP2//TPD52//IRF2BPL//AC036214.3//ZPLD1//RADIL//CDS2//LARGE1//AMBP
External Links:
MINTbase ID:tRF-19-S998LOJ4
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Asn-ATT-1-1
Anticodon:AsnATT
tRNA_number:trna20
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 147719029        End Site(bp): 147719047

[2] gtRNAdb_ID:tRNA-Asn-GTT-16-1
Anticodon:AsnGTT
tRNA_number:trna10
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 143690028        End Site(bp): 143690046

[3] gtRNAdb_ID:tRNA-Asn-GTT-16-3
Anticodon:AsnGTT
tRNA_number:trna122
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 144488898        End Site(bp): 144488916

[4] gtRNAdb_ID:tRNA-Asn-GTT-16-2
Anticodon:AsnGTT
tRNA_number:trna123
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 144308669        End Site(bp): 144308687

[5] gtRNAdb_ID:tRNA-Asn-GTT-16-4
Anticodon:AsnGTT
tRNA_number:trna24
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 147877537        End Site(bp): 147877555

[6] gtRNAdb_ID:tRNA-Asn-GTT-16-5
Anticodon:AsnGTT
tRNA_number:trna30
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 149608609        End Site(bp): 149608627

[7] gtRNAdb_ID:tRNA-Asn-GTT-12-1
Anticodon:AsnGTT
tRNA_number:trna97
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149326327        End Site(bp): 149326345

[8] gtRNAdb_ID:tRNA-Asn-GTT-10-1
Anticodon:AsnGTT
tRNA_number:trna124
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 143879887        End Site(bp): 143879905

[9] gtRNAdb_ID:tRNA-Asn-GTT-9-2
Anticodon:AsnGTT
tRNA_number:trna113
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 147520822        End Site(bp): 147520840

[10] gtRNAdb_ID:tRNA-Asn-GTT-9-1
Anticodon:AsnGTT
tRNA_number:trna115
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145979089        End Site(bp): 145979107

[11] gtRNAdb_ID:tRNA-Asn-GTT-8-1
Anticodon:AsnGTT
tRNA_number:trna89
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149711853        End Site(bp): 149711871

[12] gtRNAdb_ID:tRNA-Asn-GTT-5-1
Anticodon:AsnGTT
tRNA_number:trna136
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 16847135        End Site(bp): 16847153

[13] gtRNAdb_ID:tRNA-Asn-GTT-4-1
Anticodon:AsnGTT
tRNA_number:trna7
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 17216172        End Site(bp): 17216190

[14] gtRNAdb_ID:tRNA-Asn-GTT-3-2
Anticodon:AsnGTT
tRNA_number:trna107
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 148760411        End Site(bp): 148760429

[15] gtRNAdb_ID:tRNA-Asn-GTT-3-1
Anticodon:AsnGTT
tRNA_number:trna108
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 148598369        End Site(bp): 148598387

[16] gtRNAdb_ID:tRNA-Asn-GTT-2-1
Anticodon:AsnGTT
tRNA_number:trna26
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 148248115        End Site(bp): 148248133

[17] gtRNAdb_ID:tRNA-Asn-GTT-2-2
Anticodon:AsnGTT
tRNA_number:trna83
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161397922        End Site(bp): 161397940

[18] gtRNAdb_ID:tRNA-Asn-GTT-2-3
Anticodon:AsnGTT
tRNA_number:trna4
Chromosome:10
Strand:-
Coordinate:Start Site(bp): 22518493        End Site(bp): 22518511

[19] gtRNAdb_ID:tRNA-Asn-GTT-2-4
Anticodon:AsnGTT
tRNA_number:trna7
Chromosome:13
Strand:-
Coordinate:Start Site(bp): 31248156        End Site(bp): 31248174

[20] gtRNAdb_ID:tRNA-Asn-GTT-2-5
Anticodon:AsnGTT
tRNA_number:trna31
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 36908089        End Site(bp): 36908107

[21] gtRNAdb_ID:tRNA-Asn-GTT-2-6
Anticodon:AsnGTT
tRNA_number:trna1
Chromosome:19
Strand:+
Coordinate:Start Site(bp): 1383562        End Site(bp): 1383580

[22] gtRNAdb_ID:tRNA-Asn-GTT-1-1
Anticodon:AsnGTT
tRNA_number:trna47
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161510031        End Site(bp): 161510049



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D001943DOID:1612
Disease Name:Breast Neoplasmsbreast cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Skin and Connective Tissue Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the human BREAST.A thoracic cancer that originates in the mammary gland.
Alias:Breast Cancer//Breast Carcinoma//Breast Tumors//Cancer of Breast//Cancer of the Breast//Human Mammary Carcinoma//Malignant Neoplasm of Breast//Malignant Tumor of Breast//Mammary Cancer//Mammary Carcinoma, Human//Mammary Neoplasm, Human//Mammary Neoplasms, Human//Neoplasms, Breast//Tumors, Breastbreast tumor//malignant neoplasm of breast//malignant tumor of the breast//mammary cancer//mammary neoplasm//mammary tumor//primary breast cancer



Disease Association Statistics

Total Associated tsRNA Number:549
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:Data Mining



Reference

[1] PubMed ID:29229607
Disease Name:Breast Neoplasms
Tissue:Breast
Dysfunction Pattern:Up-Regulation
Validated Method:Data Mining
Description:N/A
Comparision:Tumor/White VS Normal/White
Mechanism:N/A

[2] PubMed ID:29229607
Disease Name:Breast Neoplasms
Tissue:Breast
Dysfunction Pattern:Up-Regulation
Validated Method:Data Mining
Description:N/A
Comparision:Tumor/Black VS Normal/Black
Mechanism:N/A