Entry Detail


General Information

Database ID:TRD03024
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:AsnATT-20
tsRNA Type:tRF-5
Amino acid and Anticodon:AsnATT
Sequence:GTCTCTGTGGCGCAATCGGT
Related Target:N/A
Predicted Target:AQP2//ZPLD1//CDS2//GRAPL//RADIL//ARF1//JAK1//TBC1D5//POTEF//ZNF628
External Links:
MINTbase ID:tRF-20-S998LOW3
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Asn-ATT-1-1
Anticodon:AsnATT
tRNA_number:trna20
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 147719029        End Site(bp): 147719048

[2] gtRNAdb_ID:tRNA-Asn-GTT-16-1
Anticodon:AsnGTT
tRNA_number:trna10
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 143690028        End Site(bp): 143690047

[3] gtRNAdb_ID:tRNA-Asn-GTT-16-3
Anticodon:AsnGTT
tRNA_number:trna122
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 144488897        End Site(bp): 144488916

[4] gtRNAdb_ID:tRNA-Asn-GTT-16-2
Anticodon:AsnGTT
tRNA_number:trna123
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 144308668        End Site(bp): 144308687

[5] gtRNAdb_ID:tRNA-Asn-GTT-16-4
Anticodon:AsnGTT
tRNA_number:trna24
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 147877537        End Site(bp): 147877556

[6] gtRNAdb_ID:tRNA-Asn-GTT-16-5
Anticodon:AsnGTT
tRNA_number:trna30
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 149608609        End Site(bp): 149608628

[7] gtRNAdb_ID:tRNA-Asn-GTT-9-2
Anticodon:AsnGTT
tRNA_number:trna113
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 147520821        End Site(bp): 147520840

[8] gtRNAdb_ID:tRNA-Asn-GTT-9-1
Anticodon:AsnGTT
tRNA_number:trna115
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145979088        End Site(bp): 145979107

[9] gtRNAdb_ID:tRNA-Asn-GTT-5-1
Anticodon:AsnGTT
tRNA_number:trna136
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 16847134        End Site(bp): 16847153

[10] gtRNAdb_ID:tRNA-Asn-GTT-4-1
Anticodon:AsnGTT
tRNA_number:trna7
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 17216172        End Site(bp): 17216191

[11] gtRNAdb_ID:tRNA-Asn-GTT-3-2
Anticodon:AsnGTT
tRNA_number:trna107
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 148760410        End Site(bp): 148760429

[12] gtRNAdb_ID:tRNA-Asn-GTT-3-1
Anticodon:AsnGTT
tRNA_number:trna108
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 148598368        End Site(bp): 148598387

[13] gtRNAdb_ID:tRNA-Asn-GTT-2-1
Anticodon:AsnGTT
tRNA_number:trna26
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 148248115        End Site(bp): 148248134

[14] gtRNAdb_ID:tRNA-Asn-GTT-2-2
Anticodon:AsnGTT
tRNA_number:trna83
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161397921        End Site(bp): 161397940

[15] gtRNAdb_ID:tRNA-Asn-GTT-2-3
Anticodon:AsnGTT
tRNA_number:trna4
Chromosome:10
Strand:-
Coordinate:Start Site(bp): 22518492        End Site(bp): 22518511

[16] gtRNAdb_ID:tRNA-Asn-GTT-2-4
Anticodon:AsnGTT
tRNA_number:trna7
Chromosome:13
Strand:-
Coordinate:Start Site(bp): 31248155        End Site(bp): 31248174

[17] gtRNAdb_ID:tRNA-Asn-GTT-2-5
Anticodon:AsnGTT
tRNA_number:trna31
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 36908088        End Site(bp): 36908107

[18] gtRNAdb_ID:tRNA-Asn-GTT-2-6
Anticodon:AsnGTT
tRNA_number:trna1
Chromosome:19
Strand:+
Coordinate:Start Site(bp): 1383562        End Site(bp): 1383581

[19] gtRNAdb_ID:tRNA-Asn-GTT-1-1
Anticodon:AsnGTT
tRNA_number:trna47
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161510031        End Site(bp): 161510050



tsRNA Association Statistics

Total Associated Disease Number:3
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D007248DOID:12336
Disease Name:Infertility, Malemale infertility
Category:MeSHDisease Ontology
Type:Urogenital Diseasesdisease of anatomical entity
Define:The inability of the male to effect FERTILIZATION of an OVUM after a specified period of unprotected intercourse. Male sterility is permanent infertility.N/A
Alias:Sterility, Male//Sub-Fertility, Male//Subfertility, MaleN/A



Disease Association Statistics

Total Associated tsRNA Number:26
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:30992999
Disease Name:Infertility, Male
Tissue:Reproductive Organ
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:N/A
Comparision:Low rate of good quality embryos VS High rate of good quality embryos
Mechanism:N/A