Entry Detail


General Information

Database ID:TRD02939
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-21-RK9P4P9L0
tsRNA Type:tRF-5
Amino acid and Anticodon:AlaAGC;AlaCGC;AlaTGC;CysGCA;ValAAC
Sequence:GGGGGTGTAGCTCAGTGGTAG
Related Target:N/A
Predicted Target:HGS//SGSM2//GPR84//MYOCD//PHF12//PLK3//NACC1//MROH6//XKR8//THOC5
External Links:
MINTbase ID:tRF-21-RK9P4P9L0
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Ala-AGC-7-1
Anticodon:AlaAGC
tRNA_number:trna68
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28687481        End Site(bp): 28687501

[2] gtRNAdb_ID:tRNA-Ala-AGC-5-1
Anticodon:AlaAGC
tRNA_number:trna67
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28678366        End Site(bp): 28678386

[3] gtRNAdb_ID:tRNA-Ala-AGC-3-1
Anticodon:AlaAGC
tRNA_number:trna65
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28574933        End Site(bp): 28574953

[4] gtRNAdb_ID:tRNA-Ala-AGC-2-2
Anticodon:AlaAGC
tRNA_number:trna101
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28831513        End Site(bp): 28831533

[5] gtRNAdb_ID:tRNA-Ala-AGC-2-1
Anticodon:AlaAGC
tRNA_number:trna102
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28806272        End Site(bp): 28806292

[6] gtRNAdb_ID:tRNA-Ala-CGC-4-1
Anticodon:AlaCGC
tRNA_number:trna70
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28697092        End Site(bp): 28697112

[7] gtRNAdb_ID:tRNA-Ala-TGC-8-1
Anticodon:AlaTGC
tRNA_number:trna18
Chromosome:11
Strand:-
Coordinate:Start Site(bp): 50233930        End Site(bp): 50233950

[8] gtRNAdb_ID:tRNA-Ala-TGC-7-1
Anticodon:AlaTGC
tRNA_number:trna107
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28770627        End Site(bp): 28770647

[9] gtRNAdb_ID:tRNA-Ala-TGC-6-1
Anticodon:AlaTGC
tRNA_number:trna113
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28726192        End Site(bp): 28726212

[10] gtRNAdb_ID:tRNA-Ala-TGC-5-1
Anticodon:AlaTGC
tRNA_number:trna104
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28785063        End Site(bp): 28785083

[11] gtRNAdb_ID:tRNA-Ala-TGC-1-1
Anticodon:AlaTGC
tRNA_number:trna110
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28757598        End Site(bp): 28757618

[12] gtRNAdb_ID:tRNA-Cys-GCA-6-1
Anticodon:CysGCA
tRNA_number:trna7
Chromosome:3
Strand:-
Coordinate:Start Site(bp): 131947995        End Site(bp): 131948015

[13] gtRNAdb_ID:tRNA-Val-AAC-6-1
Anticodon:ValAAC
tRNA_number:trna115
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28703257        End Site(bp): 28703277



tsRNA Association Statistics

Total Associated Disease Number:3
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D000077192DOID:3910
Disease Name:Adenocarcinoma of Lunglung adenocarcinoma
Category:MeSHDisease Ontology
Type:Neoplasmsdisease of anatomical entity//disease of cellular proliferation
Define:A carcinoma originating in the lung and the most common lung cancer type in never-smokers. Malignant cells exhibit distinct features such as glandular epithelial, or tubular morphology. Mutations in KRAS, EGFR, BRAF, and ERBB2 genes are associated with this cancer.A lung non-small cell carcinoma that derives_from epithelial cells of glandular origin.
Alias:Lung Adenocarcinomaadenocarcinoma of lung//bronchogenic lung adenocarcinoma//nonsmall cell adenocarcinoma



Disease Association Statistics

Total Associated tsRNA Number:203
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:35115004
Disease Name:Adenocarcinoma of Lung
Tissue:Lung glands
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:Only 155 consistent differential expression tsRNA (Co-DEtsRNAs) were detected by intersection analysis, 135 of which were up-regulated and 20 of which were down-regulated, and these were kept for further analysis.
Comparision:LUAD VS Normal
Mechanism:N/A