Entry Detail


General Information

Database ID:TRD02936
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-20-RK9P4P9L
tsRNA Type:tRF-5
Amino acid and Anticodon:AlaAGC;AlaCGC;AlaTGC;CysGCA;ValAAC
Sequence:GGGGGTGTAGCTCAGTGGTA
Related Target:N/A
Predicted Target:HGS//SGSM2//MYOCD//GPR84//PHF12//MROH6//NDUFB4//PLK3//HSPA12A//XYLT2
External Links:
MINTbase ID:tRF-20-RK9P4P9L
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Ala-AGC-7-1
Anticodon:AlaAGC
tRNA_number:trna68
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28687481        End Site(bp): 28687500

[2] gtRNAdb_ID:tRNA-Ala-AGC-5-1
Anticodon:AlaAGC
tRNA_number:trna67
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28678366        End Site(bp): 28678385

[3] gtRNAdb_ID:tRNA-Ala-AGC-3-1
Anticodon:AlaAGC
tRNA_number:trna65
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28574933        End Site(bp): 28574952

[4] gtRNAdb_ID:tRNA-Ala-AGC-2-2
Anticodon:AlaAGC
tRNA_number:trna101
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28831514        End Site(bp): 28831533

[5] gtRNAdb_ID:tRNA-Ala-AGC-2-1
Anticodon:AlaAGC
tRNA_number:trna102
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28806273        End Site(bp): 28806292

[6] gtRNAdb_ID:tRNA-Ala-CGC-4-1
Anticodon:AlaCGC
tRNA_number:trna70
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28697092        End Site(bp): 28697111

[7] gtRNAdb_ID:tRNA-Ala-TGC-8-1
Anticodon:AlaTGC
tRNA_number:trna18
Chromosome:11
Strand:-
Coordinate:Start Site(bp): 50233931        End Site(bp): 50233950

[8] gtRNAdb_ID:tRNA-Ala-TGC-7-1
Anticodon:AlaTGC
tRNA_number:trna107
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28770628        End Site(bp): 28770647

[9] gtRNAdb_ID:tRNA-Ala-TGC-6-1
Anticodon:AlaTGC
tRNA_number:trna113
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28726193        End Site(bp): 28726212

[10] gtRNAdb_ID:tRNA-Ala-TGC-5-1
Anticodon:AlaTGC
tRNA_number:trna104
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28785064        End Site(bp): 28785083

[11] gtRNAdb_ID:tRNA-Ala-TGC-1-1
Anticodon:AlaTGC
tRNA_number:trna110
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28757599        End Site(bp): 28757618

[12] gtRNAdb_ID:tRNA-Cys-GCA-6-1
Anticodon:CysGCA
tRNA_number:trna7
Chromosome:3
Strand:-
Coordinate:Start Site(bp): 131947996        End Site(bp): 131948015

[13] gtRNAdb_ID:tRNA-Val-AAC-6-1
Anticodon:ValAAC
tRNA_number:trna115
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28703258        End Site(bp): 28703277



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D016889DOID:0050939
Disease Name:Endometrial Neoplasmsuterine corpus endometrial carcinoma
Category:MeSHDisease Ontology
Type:Neoplasms//Urogenital Diseasesdisease of cellular proliferation//disease of anatomical entity
Define:Tumors or cancer of ENDOMETRIUM, the mucous lining of the UTERUS. These neoplasms can be benign or malignant. Their classification and grading are based on the various cell types and the percent of undifferentiated cells.A uterine corpus cancer that is derives_from the inner lining of the uterus.
Alias:Cancer of Endometrium//Cancer of the Endometrium//Carcinoma of Endometrium//Endometrial Cancer//Endometrial Carcinoma//Endometrium Cancer//Neoplasms, EndometrialN/A



Disease Association Statistics

Total Associated tsRNA Number:227
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:36803014
Disease Name:Endometrial Neoplasms
Tissue:Endometrium
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:The levels of tsRNAs between EC tissues and normal endometrial tissues were compared and 173 differentially expressed tsRNAs were identified, including 80 downregulated and 93 upregulated tsRNAs (Figure 1B & C). All differentially expressed tsRNAs are listed in Supplementary Table 2.
Comparision:Cancer VS Normal
Mechanism:N/A