Entry Detail



General Information

Database ID:TRD02914
Confidence:Very High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRFAla-AGC-3-M8
tsRNA Type:tRF-5
Amino acid and Anticodon:AlaAGC
Sequence:ACTGAGCTACATCCCC
Related Target:EphA7
Predicted Target:FADS6//TPP1//STK24//PGPEP1//SF3A3//APEX1//ASCC3//MBP//IGSF9B//LTBP3
External Links:
MINTbase ID:N/A
tRFdb ID:N/A



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D000544DOID:10652
Disease Name:Alzheimer DiseaseAlzheimer's disease
Category:MeSHDisease Ontology
Type:Nervous System Diseases//Mental Disordersdisease of anatomical entity
Define:A degenerative disease of the BRAIN characterized by the insidious onset of DEMENTIA. Impairment of MEMORY, judgment, attention span, and problem solving skills are followed by severe APRAXIAS and a global loss of cognitive abilities. The condition primarily occurs after age 60, and is marked pathologically by severe cortical atrophy and the triad of SENILE PLAQUES; NEUROFIBRILLARY TANGLES; and NEUROPIL THREADS. (From Adams et al., Principles of Neurology, 6th ed, pp1049-57)A tauopathy that is characterized by memory lapses, confusion, emotional instability and progressive loss of mental ability and results in progressive memory loss, impaired thinking, disorientation, and changes in personality and mood starting and leads in advanced cases to a profound decline in cognitive and physical functioning and is marked histologically by the degeneration of brain neurons especially in the cerebral cortex and by the presence of neurofibrillary tangles and plaques containing beta-amyloid.
Alias:Acute Confusional Senile Dementia//Alzheimer Dementia//Alzheimer Disease, Early Onset//Alzheimer Disease, Late Onset//Alzheimer Sclerosis//Alzheimer Syndrome//Alzheimer Type Senile Dementia//Alzheimer's Disease//Alzheimer's Disease, Focal Onset//Alzheimer's Diseases//Alzheimer-Type Dementia (ATD)//Dementia, Alzheimer Type//Dementia, Presenile//Dementia, Primary Senile Degenerative//Dementia, Senile//Early Onset Alzheimer Disease//Familial Alzheimer Disease (FAD)//Focal Onset Alzheimer's Disease//Late Onset Alzheimer Disease//Presenile Alzheimer Dementia//Primary Senile Degenerative Dementia//Senile Dementia, Acute Confusional//Senile Dementia, Alzheimer TypeAlzheimer disease//Alzheimers dementia



Disease Association Statistics

Total Associated tsRNA Number:151
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR//Transfection//Luciferase reporter assay//RIP//Western blot
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:40375351
Disease Name:Alzheimer Disease
Tissue:Brain
Dysfunction Pattern:N/A
Validated Method:RT-PCR//Transfection//Luciferase reporter assay//RIP//Western blot//High-throughput sequencing
Description:AD is the most prevalent form of dementia among older adults. Although its etiology is not completely understood, it is generally believed to involve a combination of genetic, environmental, and lifestyle factors [16]. Current diagnostic methods rely on cognitive assessments, neuropsychological tests, neuroimaging techniques (such as magnetic resonance imaging and positron emission tomography), and cerebrospinal fluid analysis [17]. To date, there is no effective cure for AD; Existing treatments only alleviate symptoms and improve quality of life. Therefore, developing and validating novel biomarkers, exploring novel drug targets, and formulating effective therapeutic strategies are critical for early and accurate diagnosis and treatment. Over the years, tsRNAs have garnered significant attention as emerging non-coding RNAs because of their high stability and specificity. TsRNAs play crucial roles in various biological processes, including gene regulation, cellular stress responses, and disease development [9]. Our study is the first to identify that tRFAla-AGC-3-M8 is significantly reduced in case of Aβ deposition in patients with AD. This reduction was negatively correlated with the expression of the target gene EphA7. EphA7 upregulation activates the ERK1/2-p70S6K phosphorylation pathway, which promotes microglial M1-type polarization and enhances tau protein phosphorylation in neurons, leading to neuronal damage.
Comparision:Disease VS Control
Mechanism:TRF and tiRNA from 5’end of tRNAs may be crucial in the pathology of AD. Current evidence suggests that tsRNAs from different sources have distinct biological functions [18], with 5’tRNAs playing vital roles in immunity, hematopoiesis, and intercellular communication [19]. In the context of AD, where neuroinflammation and dysregulated gene expression are hallmark features, the exploration of specific 5’tRNAs may uncover novel regulatory mechanisms underlying disease progression. In our study, we focused on identifying and characterizing 5’tRNAs with potential roles in AD pathogenesis. Through a combination of sequencing analysis and in vivo validation, we identified three key 5’tRNAs tiRNAGly-CCC-2, tRFAla-AGC-3-M8, and tRFGly-TCC-1 as major regulatory molecules. Notably, our statistical results suggest that tRFAla-AGC-3-M8 interacts with EphA7 through an 8mer-1a binding pattern, indicating a perfect match between tRFAla-AGC-3-M8 and nucleotides 2 − 8 in the 3’ UTR of EphA7, with A at position one, suggesting a novel mechanism by which tsRNAs may modulate gene expression in AD.