Entry Detail


General Information

Database ID:TRD02913
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-Ala-AGC-049
tsRNA Type:tRF-5
Amino acid and Anticodon:AlaAGC
Sequence:GGGGGTGTAGCTCAGTGGTAGAGC
Related Target:N/A
Predicted Target:GPR84//FAM189B//UBA52//RPAP1//HGS//PLK3//SH3GL1//NUMA1//ITPR3//WNT11
External Links:
MINTbase ID:tRF-24-RK9P4P9LH9
tRFdb ID:tRFdb-5017b

[1] gtRNAdb_ID:tRNA-Ala-AGC-7-1
Anticodon:AlaAGC
tRNA_number:trna68
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28687481        End Site(bp): 28687504

[2] gtRNAdb_ID:tRNA-Ala-AGC-5-1
Anticodon:AlaAGC
tRNA_number:trna67
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28678366        End Site(bp): 28678389

[3] gtRNAdb_ID:tRNA-Ala-AGC-3-1
Anticodon:AlaAGC
tRNA_number:trna65
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28574933        End Site(bp): 28574956

[4] gtRNAdb_ID:tRNA-Ala-AGC-2-2
Anticodon:AlaAGC
tRNA_number:trna101
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28831510        End Site(bp): 28831533

[5] gtRNAdb_ID:tRNA-Ala-AGC-2-1
Anticodon:AlaAGC
tRNA_number:trna102
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28806269        End Site(bp): 28806292

[6] gtRNAdb_ID:tRNA-Ala-CGC-4-1
Anticodon:AlaCGC
tRNA_number:trna70
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28697092        End Site(bp): 28697115

[7] gtRNAdb_ID:tRNA-Ala-TGC-8-1
Anticodon:AlaTGC
tRNA_number:trna18
Chromosome:11
Strand:-
Coordinate:Start Site(bp): 50233927        End Site(bp): 50233950

[8] gtRNAdb_ID:tRNA-Ala-TGC-7-1
Anticodon:AlaTGC
tRNA_number:trna107
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28770624        End Site(bp): 28770647

[9] gtRNAdb_ID:tRNA-Ala-TGC-6-1
Anticodon:AlaTGC
tRNA_number:trna113
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28726189        End Site(bp): 28726212

[10] gtRNAdb_ID:tRNA-Ala-TGC-5-1
Anticodon:AlaTGC
tRNA_number:trna104
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28785060        End Site(bp): 28785083

[11] gtRNAdb_ID:tRNA-Ala-TGC-1-1
Anticodon:AlaTGC
tRNA_number:trna110
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28757595        End Site(bp): 28757618

[12] gtRNAdb_ID:tRNA-Cys-GCA-6-1
Anticodon:CysGCA
tRNA_number:trna7
Chromosome:3
Strand:-
Coordinate:Start Site(bp): 131947992        End Site(bp): 131948015

[13] gtRNAdb_ID:tRNA-Val-AAC-6-1
Anticodon:ValAAC
tRNA_number:trna115
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28703254        End Site(bp): 28703277



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D017719N/A
Disease Name:Diabetic FootN/A
Category:MeSHDisease Ontology
Type:Cardiovascular Diseases//Skin and Connective Tissue Diseases//Endocrine System DiseasesN/A
Define:Common foot problems in persons with DIABETES MELLITUS, caused by any combination of factors such as DIABETIC NEUROPATHIES; PERIPHERAL VASCULAR DISEASES; and INFECTION. With the loss of sensation and poor circulation, injuries and infections often lead to severe foot ulceration, GANGRENE and AMPUTATION, SURGICAL.N/A
Alias:Diabetic Feet//Foot Ulcer, DiabeticN/A



Disease Association Statistics

Total Associated tsRNA Number:277
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing//Data Mining



Reference

[1] PubMed ID:34657473
Disease Name:Diabetic Foot
Tissue:Skin
Dysfunction Pattern:Down-Regulation
Validated Method:High-throughput sequencing//Data Mining
Description:In addition, 244 tsRNAs were confirmed to be dysregulated in DFU tissues: 178 tsRNAs were upregulated, whereas 66 tsRNAs were downregulated (DFU vs normal; FC >1.5 and p < 0.05; Figure 2D & Supplementary data 180).
Comparision:DFU VS Normal
Mechanism:N/A