Entry Detail



General Information

Database ID:TRD02887
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:AS-tDR-000067
tsRNA Type:tRF-3;i-tRF
Amino acid and Anticodon:CysGCA
Sequence:TCCGGGTGCCCCCTCCA
Related Target:N/A
Predicted Target:VSX2//MAN1A1//PDGFC//POLR2H//FAM181B//JAKMIP1//C4orf50//PDZRN3//TSPY2//CLIC6
External Links:
MINTbase ID:tRF-17-8871K92
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Cys-GCA-14-1
Anticodon:CysGCA
tRNA_number:trna29
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 37017937-3        End Site(bp): 37017950

[2] gtRNAdb_ID:tRNA-Cys-GCA-11-1
Anticodon:CysGCA
tRNA_number:trna21
Chromosome:7
Strand:-
Coordinate:Start Site(bp): 149112229-3        End Site(bp): 149112242

[3] gtRNAdb_ID:tRNA-Cys-GCA-8-1
Anticodon:CysGCA
tRNA_number:trna8
Chromosome:14
Strand:+
Coordinate:Start Site(bp): 73429737        End Site(bp): 73429750+3

[4] gtRNAdb_ID:tRNA-Cys-GCA-7-1
Anticodon:CysGCA
tRNA_number:trna127
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 93981834-3        End Site(bp): 93981847

[5] gtRNAdb_ID:tRNA-Cys-GCA-5-1
Anticodon:CysGCA
tRNA_number:trna3
Chromosome:15
Strand:+
Coordinate:Start Site(bp): 80037056        End Site(bp): 80037069+3

[6] gtRNAdb_ID:tRNA-Cys-GCA-4-1
Anticodon:CysGCA
tRNA_number:trna28
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 37025545-3        End Site(bp): 37025558

[7] gtRNAdb_ID:tRNA-Cys-GCA-2-2
Anticodon:CysGCA
tRNA_number:trna15
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 37023956        End Site(bp): 37023969+3

[8] gtRNAdb_ID:tRNA-Cys-GCA-2-4
Anticodon:CysGCA
tRNA_number:trna26
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 37310744-3        End Site(bp): 37310757

[9] gtRNAdb_ID:tRNA-Cys-GCA-2-3
Anticodon:CysGCA
tRNA_number:trna27
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 37309987-3        End Site(bp): 37310000

[10] gtRNAdb_ID:tRNA-Cys-GCA-2-1
Anticodon:CysGCA
tRNA_number:trna3
Chromosome:4
Strand:-
Coordinate:Start Site(bp): 124430005-3        End Site(bp): 124430018



tsRNA Association Statistics

Total Associated Disease Number:9
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D066253N/A
Disease Name:Vascular RemodelingN/A
Category:MeSHDisease Ontology
Type:Pathological Conditions, Signs and Symptoms//Circulatory and Respiratory Physiological PhenomenaN/A
Define:The active alterations of vascular wall structures, often leading to elevated VASCULAR RESISTANCE. It is associated with AGING; ATHEROSCLEROSIS; DIABETES MELLITUS; HYPERTENSION; PREGNANCY; PULMONARY HYPERTENSION; and STROKE, but is also a normal part of EMBRYOGENESIS.N/A
Alias:N/AN/A



Disease Association Statistics

Total Associated tsRNA Number:24
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR//Western blot
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:35705912
Disease Name:Vascular Remodeling
Tissue:HASMCs
Dysfunction Pattern:Up-Regulation
Validated Method:RT-PCR//Western blot//High-throughput sequencing
Description:AS-tDR-001370, AS-tDR-000067, AS-tDR-009512, and AS-tDR-000076 were increased in proliferative HASMCs and were mainly located in the nucleus.
Comparision:Proliferative HASMC VS Quiescent HASMC
Mechanism:Data Mining suggested that the four tsRNAs involved a variety of GO terms and pathways related to VSMC proliferation. AS-tDR-000067 promoted HASMC proliferation by suppressing p53 transcription in a promoter-targeted manner. AS-tDR-000076 accelerated HASMC proliferation by attenuating mitofusin 2 (MFN2) levels in a 3′-untranslated region (UTR)-targeted manner.