Entry Detail


General Information

Database ID:TRD02728
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-Tyr-GTA-007
tsRNA Type:tRF-3
Amino acid and Anticodon:TyrGTA
Sequence:TTCCGGCTCGAAGGACCA
Related Target:N/A
Predicted Target:KLHDC4//GAD2//CHD2//TMEM41A//NRROS//CCDC106//IPO13//ATAD1//AP2A2//DUS2
External Links:
MINTbase ID:tRF-18-YSQSD2D2
tRFdb ID:tRFdb-3030a

[1] gtRNAdb_ID:tRNA-Tyr-GTA-5-3
Anticodon:TyrGTA
tRNA_number:trna19
Chromosome:14
Strand:-
Coordinate:Start Site(bp): 21121258-3        End Site(bp): 21121272

[2] gtRNAdb_ID:tRNA-Tyr-GTA-7-1
Anticodon:TyrGTA
tRNA_number:trna17
Chromosome:14
Strand:-
Coordinate:Start Site(bp): 21128117-3        End Site(bp): 21128131

[3] gtRNAdb_ID:tRNA-Tyr-GTA-5-4
Anticodon:TyrGTA
tRNA_number:trna16
Chromosome:14
Strand:-
Coordinate:Start Site(bp): 21131351-3        End Site(bp): 21131365

[4] gtRNAdb_ID:tRNA-Tyr-GTA-5-5
Anticodon:TyrGTA
tRNA_number:trna5
Chromosome:14
Strand:+
Coordinate:Start Site(bp): 21151506        End Site(bp): 21151520+3

[5] gtRNAdb_ID:tRNA-Tyr-GTA-2-1
Anticodon:TyrGTA
tRNA_number:trna2
Chromosome:2
Strand:+
Coordinate:Start Site(bp): 27273724        End Site(bp): 27273738+3

[6] gtRNAdb_ID:tRNA-Tyr-GTA-5-1
Anticodon:TyrGTA
tRNA_number:trna4
Chromosome:8
Strand:+
Coordinate:Start Site(bp): 67025680        End Site(bp): 67025694+3

[7] gtRNAdb_ID:tRNA-Tyr-GTA-5-2
Anticodon:TyrGTA
tRNA_number:trna5
Chromosome:8
Strand:+
Coordinate:Start Site(bp): 67026297        End Site(bp): 67026311+3



tsRNA Association Statistics

Total Associated Disease Number:22
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D017719N/A
Disease Name:Diabetic FootN/A
Category:MeSHDisease Ontology
Type:Cardiovascular Diseases//Skin and Connective Tissue Diseases//Endocrine System DiseasesN/A
Define:Common foot problems in persons with DIABETES MELLITUS, caused by any combination of factors such as DIABETIC NEUROPATHIES; PERIPHERAL VASCULAR DISEASES; and INFECTION. With the loss of sensation and poor circulation, injuries and infections often lead to severe foot ulceration, GANGRENE and AMPUTATION, SURGICAL.N/A
Alias:Diabetic Feet//Foot Ulcer, DiabeticN/A



Disease Association Statistics

Total Associated tsRNA Number:277
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing//Data Mining



Reference

[1] PubMed ID:34657473
Disease Name:Diabetic Foot
Tissue:Skin
Dysfunction Pattern:Down-Regulation
Validated Method:High-throughput sequencing//Data Mining
Description:In addition, 244 tsRNAs were confirmed to be dysregulated in DFU tissues: 178 tsRNAs were upregulated, whereas 66 tsRNAs were downregulated (DFU vs normal; FC >1.5 and p < 0.05; Figure 2D & Supplementary data 238).
Comparision:DFU VS Normal
Mechanism:N/A