Entry Detail



General Information

Database ID:TRD02599
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-68:85-Ser-GCT-3-M4
tsRNA Type:tRF-3
Amino acid and Anticodon:SerGCT
Sequence:ATCCCATCCTCGTCGCCA
Related Target:N/A
Predicted Target:SMAD6//ADAM10//BOP1//PPP2R5E//MZF1//ZEB2//ADRA2A//ELMSAN1//HECA//RASGRP2
External Links:
MINTbase ID:tRF-18-HRH7MSD2
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Ser-GCT-6-1
Anticodon:SerGCT
tRNA_number:trna175
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26305718-3        End Site(bp): 26305732

[2] gtRNAdb_ID:tRNA-Ser-GCT-5-1
Anticodon:SerGCT
tRNA_number:trna62
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28180882        End Site(bp): 28180896+3

[3] gtRNAdb_ID:tRNA-Ser-GCT-4-2
Anticodon:SerGCT
tRNA_number:trna10
Chromosome:15
Strand:-
Coordinate:Start Site(bp): 40886023-3        End Site(bp): 40886037

[4] gtRNAdb_ID:tRNA-Ser-GCT-4-3
Anticodon:SerGCT
tRNA_number:trna7
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 8090251        End Site(bp): 8090265+3

[5] gtRNAdb_ID:tRNA-Ser-GCT-4-1
Anticodon:SerGCT
tRNA_number:trna123
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28565117-3        End Site(bp): 28565131

[6] gtRNAdb_ID:tRNA-Ser-GCT-3-1
Anticodon:SerGCT
tRNA_number:trna8
Chromosome:11
Strand:+
Coordinate:Start Site(bp): 66115658        End Site(bp): 66115672+3



tsRNA Association Statistics

Total Associated Disease Number:5
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D008180DOID:9074
Disease Name:Lupus Erythematosus, Systemicsystemic lupus erythematosus
Category:MeSHDisease Ontology
Type:Skin and Connective Tissue Diseases//Immune System Diseasesdisease of anatomical entity
Define:A chronic, relapsing, inflammatory, and often febrile multisystemic disorder of connective tissue, characterized principally by involvement of the skin, joints, kidneys, and serosal membranes. It is of unknown etiology, but is thought to represent a failure of the regulatory mechanisms of the autoimmune system. The disease is marked by a wide range of system dysfunctions, an elevated erythrocyte sedimentation rate, and the formation of LE cells in the blood or bone marrow.A lupus erythematosus that is an inflammation of connective tissue marked by skin rashes, joint pain and swelling, inflammation of the kidneys and inflammation of the tissue surrounding the heart.
Alias:Libman-Sacks Disease//Lupus Erythematosus Disseminatus//Systemic Lupus Erythematosusdisseminated lupus erythematosus//Lupus Erythematosus, systemic//SLE - Lupus Erythematosus, systemic



Disease Association Statistics

Total Associated tsRNA Number:111
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:34867955
Disease Name:Lupus Erythematosus, Systemic
Tissue:N/A
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:We first analyzed tsRNA signatures in SLE serum and identified that tRF-His-GTG-4 was significantly upregulated in SLE serum.
Comparision:SLE VS Control
Mechanism:N/A