Entry Detail



General Information

Database ID:TRD02470
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-Glu49
tsRNA Type:tRF-3
Amino acid and Anticodon:PheGAA;GluCTC;GluTTC
Sequence:CGGGTTCGATTCCCGGTCAGGGAACCA
Related Target:FGL1
Predicted Target:FCGR2A//KIF26B//GULP1//SLC13A5//LBH//OPRK1//NIBAN2//LYNX1//MAGEE1//ME3
External Links:
MINTbase ID:tRF-27-M3WE8SSP6D2
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Phe-GAA-10-1
Anticodon:PheGAA
tRNA_number:trna92
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149672905-3        End Site(bp): 149672928

[2] gtRNAdb_ID:tRNA-Phe-GAA-9-1
Anticodon:PheGAA
tRNA_number:trna100
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149287359-3        End Site(bp): 149287382

[3] gtRNAdb_ID:tRNA-Glu-CTC-1-1
Anticodon:GluCTC
tRNA_number:trna116
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145399233-3        End Site(bp): 145399256

[4] gtRNAdb_ID:tRNA-Glu-CTC-1-5
Anticodon:GluCTC
tRNA_number:trna71
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161439189-3        End Site(bp): 161439212

[5] gtRNAdb_ID:tRNA-Glu-CTC-1-4
Anticodon:GluCTC
tRNA_number:trna74
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161431809-3        End Site(bp): 161431832

[6] gtRNAdb_ID:tRNA-Glu-CTC-1-3
Anticodon:GluCTC
tRNA_number:trna77
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161424398-3        End Site(bp): 161424421

[7] gtRNAdb_ID:tRNA-Glu-CTC-1-2
Anticodon:GluCTC
tRNA_number:trna80
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161417018-3        End Site(bp): 161417041

[8] gtRNAdb_ID:tRNA-Glu-CTC-1-6
Anticodon:GluCTC
tRNA_number:trna77
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28950024        End Site(bp): 28950047+3

[9] gtRNAdb_ID:tRNA-Glu-CTC-1-7
Anticodon:GluCTC
tRNA_number:trna87
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 126101393-3        End Site(bp): 126101416

[10] gtRNAdb_ID:tRNA-Glu-TTC-4-1
Anticodon:GluTTC
tRNA_number:trna134
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 16861774-3        End Site(bp): 16861797

[11] gtRNAdb_ID:tRNA-Glu-TTC-4-2
Anticodon:GluTTC
tRNA_number:trna84
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161391883-3        End Site(bp): 161391906



tsRNA Association Statistics

Total Associated Disease Number:3
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D002583DOID:4362
Disease Name:Uterine Cervical Neoplasmscervical cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Urogenital Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the UTERINE CERVIX.A female reproductive organ cancer that is located_in the cervix.
Alias:Cancer of Cervix//Cancer of the Cervix//Cancer of the Uterine Cervix//Cervical Cancer//Cervical Neoplasms//Cervix Cancer//Cervix Neoplasms//Neoplasms, Cervical//Neoplasms, Cervix//Uterine Cervical Cancercervical neoplasm//cervix cancer//cervix uteri cancer//neoplasm of uterine cervix//tumor of the Cervix Uteri//uterine cervical neoplasm



Disease Association Statistics

Total Associated tsRNA Number:38
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR
Weak Evidence:Microarray



Reference

[1] PubMed ID:36039056
Disease Name:Uterine Cervical Neoplasms
Tissue:Cervical Cancer
Dysfunction Pattern:Down-Regulation
Validated Method:RT-PCR//Microarray
Description:tRNA-derived fragment tRF-Glu49 inhibits cell proliferation, migration and invasion in cervical cancer by targeting FGL1.
Comparision:Cancer VS Normal
Mechanism:The potential tumor suppressor gene tRF-Glu49 was identified in cervical carcinoma through tRF and tiRNA microarray investigation. A reverse transcription-quanti- tative PCR assay then demonstrated that tRF-Glu49 was downregulated in the cervical carcinoma tissue. Further clinicopathological analysis proved that tRF-Glu49 was associated with less aggressive clinical features and improved prognosis. Cell Counting Kit-8 tests, Transwell and Matrigel tests, and xCELLigence system tests revealed that tRF-Glu49 inhibited cervical cell proliferation, migra- tion and invasion processes. Mechanistic investigation revealed that tRF-Glu49 directly regulated the oncogene, fibrinogen-like protein-1 (FGL1). In general, according to the result achieved in the present study, tRF-Glu49 can modulate cervical cell proliferation, migration, and inva- sion processes through the target process for FGL1, and tRF-Glu49 is likely to be a possible prognostic biological marker in patients with cervical carcinoma.