Entry Detail


General Information

Database ID:TRD02302
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-18-HR0VX6D2
tsRNA Type:tRF-3
Amino acid and Anticodon:LeuAAG;LeuTAG
Sequence:ATCCCACCGCTGCCACCA
Related Target:N/A
Predicted Target:ZNF853//KIF3B//MAML2//APOBR//VAX2//PHF19//POU3F3//RAN//ANKIB1//NGB
External Links:
MINTbase ID:tRF-18-HR0VX6D2
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Leu-AAG-4-1
Anticodon:LeuAAG
tRNA_number:trna126
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28446400-3        End Site(bp): 28446414

[2] gtRNAdb_ID:tRNA-Leu-AAG-3-1
Anticodon:LeuAAG
tRNA_number:trna78
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28956846        End Site(bp): 28956860+3

[3] gtRNAdb_ID:tRNA-Leu-AAG-2-3
Anticodon:LeuAAG
tRNA_number:trna1
Chromosome:14
Strand:+
Coordinate:Start Site(bp): 21078358        End Site(bp): 21078372+3

[4] gtRNAdb_ID:tRNA-Leu-AAG-2-4
Anticodon:LeuAAG
tRNA_number:trna16
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 22308528        End Site(bp): 22308542+3

[5] gtRNAdb_ID:tRNA-Leu-AAG-2-1
Anticodon:LeuAAG
tRNA_number:trna7
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180614768        End Site(bp): 180614782+3

[6] gtRNAdb_ID:tRNA-Leu-AAG-2-2
Anticodon:LeuAAG
tRNA_number:trna98
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28911399-3        End Site(bp): 28911413

[7] gtRNAdb_ID:tRNA-Leu-AAG-1-3
Anticodon:LeuAAG
tRNA_number:trna16
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180601044-3        End Site(bp): 180601058

[8] gtRNAdb_ID:tRNA-Leu-AAG-1-1
Anticodon:LeuAAG
tRNA_number:trna19
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180524474-3        End Site(bp): 180524488

[9] gtRNAdb_ID:tRNA-Leu-AAG-1-2
Anticodon:LeuAAG
tRNA_number:trna3
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180528907        End Site(bp): 180528921+3

[10] gtRNAdb_ID:tRNA-Leu-TAG-3-1
Anticodon:LeuTAG
tRNA_number:trna27
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 22207032-3        End Site(bp): 22207046

[11] gtRNAdb_ID:tRNA-Leu-TAG-1-1
Anticodon:LeuTAG
tRNA_number:trna42
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 8023632-3        End Site(bp): 8023646



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D020521N/A
Disease Name:StrokeN/A
Category:MeSHDisease Ontology
Type:Nervous System Diseases//Cardiovascular DiseasesN/A
Define:A group of pathological conditions characterized by sudden, non-convulsive loss of neurological function due to BRAIN ISCHEMIA or INTRACRANIAL HEMORRHAGES. Stroke is classified by the type of tissue NECROSIS, such as the anatomic location, vasculature involved, etiology, age of the affected individual, and hemorrhagic vs. non-hemorrhagic nature. (From Adams et al., Principles of Neurology, 6th ed, pp777-810)N/A
Alias:Apoplexy//CVA (Cerebrovascular Accident)//Cerebral Stroke//Cerebrovascular Accident//Cerebrovascular Accident, Acute//Cerebrovascular Apoplexy//Cerebrovascular Stroke//Stroke, Acute//Vascular Accident, BrainN/A



Disease Association Statistics

Total Associated tsRNA Number:46
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:33288717
Disease Name:Stroke
Tissue:N/A
Dysfunction Pattern:Up-Regulation
Validated Method:RT-PCR//High-throughput sequencing
Description:N/A
Comparision:LPS Stimulation VS NC
Mechanism:By 18 h after LPS stimulation,qRT-PCR analysis after size-selection (for <=54-nt fragments) detected pronounced Up-Regulation of the top six poststroke up-regulated tRFs.