Entry Detail


General Information

Database ID:TRD02116
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tsRNA-3029b
tsRNA Type:tRF-3
Amino acid and Anticodon:GluCTC;GluTTC
Sequence:TCGATTCCCGGTCAGGGAACCA
Related Target:N/A
Predicted Target:MYOCOS//RNF213//MID1//CHST3//PROM1//SCAF4//UBQLN4//PAXBP1//LLGL2//CDH9
External Links:
MINTbase ID:tRF-22-WE8SSP6D2
tRFdb ID:tRFdb-3029b

[1] gtRNAdb_ID:tRNA-Phe-GAA-10-1
Anticodon:PheGAA
tRNA_number:trna92
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149672905-3        End Site(bp): 149672923

[2] gtRNAdb_ID:tRNA-Phe-GAA-9-1
Anticodon:PheGAA
tRNA_number:trna100
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149287359-3        End Site(bp): 149287377

[3] gtRNAdb_ID:tRNA-Glu-TTC-7-1
Anticodon:GluTTC
tRNA_number:trna105
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149161628-3        End Site(bp): 149161646

[4] gtRNAdb_ID:tRNA-Glu-CTC-3-1
Anticodon:GluCTC
tRNA_number:trna4
Chromosome:13
Strand:-
Coordinate:Start Site(bp): 42030061-3        End Site(bp): 42030079

[5] gtRNAdb_ID:tRNA-Glu-CTC-1-1
Anticodon:GluCTC
tRNA_number:trna116
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145399233-3        End Site(bp): 145399251

[6] gtRNAdb_ID:tRNA-Glu-CTC-1-5
Anticodon:GluCTC
tRNA_number:trna71
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161439189-3        End Site(bp): 161439207

[7] gtRNAdb_ID:tRNA-Glu-CTC-1-4
Anticodon:GluCTC
tRNA_number:trna74
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161431809-3        End Site(bp): 161431827

[8] gtRNAdb_ID:tRNA-Glu-CTC-1-3
Anticodon:GluCTC
tRNA_number:trna77
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161424398-3        End Site(bp): 161424416

[9] gtRNAdb_ID:tRNA-Glu-CTC-1-2
Anticodon:GluCTC
tRNA_number:trna80
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161417018-3        End Site(bp): 161417036

[10] gtRNAdb_ID:tRNA-Glu-CTC-1-6
Anticodon:GluCTC
tRNA_number:trna77
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28950029        End Site(bp): 28950047+3

[11] gtRNAdb_ID:tRNA-Glu-CTC-1-7
Anticodon:GluCTC
tRNA_number:trna87
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 126101393-3        End Site(bp): 126101411

[12] gtRNAdb_ID:tRNA-Glu-TTC-4-1
Anticodon:GluTTC
tRNA_number:trna134
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 16861774-3        End Site(bp): 16861792

[13] gtRNAdb_ID:tRNA-Glu-TTC-4-2
Anticodon:GluTTC
tRNA_number:trna84
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161391883-3        End Site(bp): 161391901



tsRNA Association Statistics

Total Associated Disease Number:3
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D055371N/A
Disease Name:Acute Lung InjuryN/A
Category:MeSHDisease Ontology
Type:Respiratory Tract DiseasesN/A
Define:A condition of lung damage that is characterized by bilateral pulmonary infiltrates (PULMONARY EDEMA) rich in NEUTROPHILS, and in the absence of clinical HEART FAILURE. This can represent a spectrum of pulmonary lesions, endothelial and epithelial, due to numerous factors (physical, chemical, or biological).N/A
Alias:Lung Injury, AcuteN/A



Disease Association Statistics

Total Associated tsRNA Number:109
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:34811808
Disease Name:Acute Lung Injury
Tissue:N/A
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:Furthermore,in the tsRNA expression profile,the top 10 Down-Regulation tsRNAs were tsRNA-1018,tsRNA-3045b,tsRNA-5021a,tsRNA-1020,tsRNA-5002b,tsRNA-3045b,tsRNA-1026,tsRNA-5004a,tsRNA-5005b and tsRNA-1009,and the top 10 Up-Regulation tsRNAs were tsRNA-3025b,tsRNA-3025a,tsRNA-5016b,tsRNA-3042b,tsRNA-3029b,tsRNA-3028b,tsRNA-5006a,tsRNA-3027b,tsRNA-3027a,and tsRNA-5009b.
Comparision:N/A
Mechanism:N/A