Entry Detail


General Information

Database ID:TRD02111
Confidence:Low
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:chr1.trna116-GluCTC@52.75CCA.24_3_13
tsRNA Type:tRF-3
Amino acid and Anticodon:GluCTC
Sequence:GTTCGATTCCCGGTCAGGGAACCA
Related Target:N/A
Predicted Target:MYOCOS//RNF213//CHST3//MID1//SMARCA4//CHGB//ZNF341//PROM1//KIF1A//CD3EAP
External Links:
MINTbase ID:tRF-24-7SIRMM12E2
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Phe-GAA-10-1
Anticodon:PheGAA
tRNA_number:trna92
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149672905-3        End Site(bp): 149672925

[2] gtRNAdb_ID:tRNA-Phe-GAA-9-1
Anticodon:PheGAA
tRNA_number:trna100
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149287359-3        End Site(bp): 149287379

[3] gtRNAdb_ID:tRNA-Glu-TTC-7-1
Anticodon:GluTTC
tRNA_number:trna105
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149161628-3        End Site(bp): 149161648

[4] gtRNAdb_ID:tRNA-Glu-CTC-3-1
Anticodon:GluCTC
tRNA_number:trna4
Chromosome:13
Strand:-
Coordinate:Start Site(bp): 42030061-3        End Site(bp): 42030081

[5] gtRNAdb_ID:tRNA-Glu-CTC-1-1
Anticodon:GluCTC
tRNA_number:trna116
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145399233-3        End Site(bp): 145399253

[6] gtRNAdb_ID:tRNA-Glu-CTC-1-5
Anticodon:GluCTC
tRNA_number:trna71
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161439189-3        End Site(bp): 161439209

[7] gtRNAdb_ID:tRNA-Glu-CTC-1-4
Anticodon:GluCTC
tRNA_number:trna74
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161431809-3        End Site(bp): 161431829

[8] gtRNAdb_ID:tRNA-Glu-CTC-1-3
Anticodon:GluCTC
tRNA_number:trna77
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161424398-3        End Site(bp): 161424418

[9] gtRNAdb_ID:tRNA-Glu-CTC-1-2
Anticodon:GluCTC
tRNA_number:trna80
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161417018-3        End Site(bp): 161417038

[10] gtRNAdb_ID:tRNA-Glu-CTC-1-6
Anticodon:GluCTC
tRNA_number:trna77
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28950027        End Site(bp): 28950047+3

[11] gtRNAdb_ID:tRNA-Glu-CTC-1-7
Anticodon:GluCTC
tRNA_number:trna87
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 126101393-3        End Site(bp): 126101413

[12] gtRNAdb_ID:tRNA-Glu-TTC-4-1
Anticodon:GluTTC
tRNA_number:trna134
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 16861774-3        End Site(bp): 16861794

[13] gtRNAdb_ID:tRNA-Glu-TTC-4-2
Anticodon:GluTTC
tRNA_number:trna84
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161391883-3        End Site(bp): 161391903



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D001943DOID:1612
Disease Name:Breast Neoplasmsbreast cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Skin and Connective Tissue Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the human BREAST.A thoracic cancer that originates in the mammary gland.
Alias:Breast Cancer//Breast Carcinoma//Breast Tumors//Cancer of Breast//Cancer of the Breast//Human Mammary Carcinoma//Malignant Neoplasm of Breast//Malignant Tumor of Breast//Mammary Cancer//Mammary Carcinoma, Human//Mammary Neoplasm, Human//Mammary Neoplasms, Human//Neoplasms, Breast//Tumors, Breastbreast tumor//malignant neoplasm of breast//malignant tumor of the breast//mammary cancer//mammary neoplasm//mammary tumor//primary breast cancer



Disease Association Statistics

Total Associated tsRNA Number:549
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:Data Mining



Reference

[1] PubMed ID:29229607
Disease Name:Breast Neoplasms
Tissue:Breast
Dysfunction Pattern:Down-Regulation
Validated Method:Data Mining
Description:N/A
Comparision:Tumor/Black VS Tumor/White
Mechanism:N/A